ncbi-blast+ →
2.6.0-1 →
armhf → 2017-01-27 13:43:03
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| ncbi-blast+ 2.6.0-1 (armhf) Fri, 27 Jan 2017 08:50:27 +0000 |
+==============================================================================+
Package: ncbi-blast+
Version: 2.6.0-1
Source Version: 2.6.0-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-be347771-6ef8-4d8f-bead-709c7494da09' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [9731 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.7 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ncbi-blast+' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 20.4 MB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main ncbi-blast+ 2.6.0-1 (dsc) [2286 B]
Get:2 http://172.17.0.1/private stretch-staging/main ncbi-blast+ 2.6.0-1 (tar) [20.4 MB]
Get:3 http://172.17.0.1/private stretch-staging/main ncbi-blast+ 2.6.0-1 (diff) [27.2 kB]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-NJ30XM' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/gpg/pubring.kbx' created
gpg: /build/ncbi-blast+-NJ30XM/resolver-PiDbxt/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ InRelease
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Get:3 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ Sources [349 B]
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Install core build dependencies (apt-based resolver)
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Installing build dependencies
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Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n kbd libfuse2 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 63 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libpcre3-dev, time, zlib1g-dev
Filtered Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libpcre3-dev, time, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ncbi-blast+-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ Release [963 B]
Get:3 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-NJ30XM/resolver-PiDbxt/apt_archive ./ Sources [547 B]
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Reading package lists...
Install ncbi-blast+ build dependencies (apt-based resolver)
-----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
fuse2fs gnupg-l10n kbd libfuse2 manpages netbase psmisc
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-dev
libcroco3 libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev
libgmp10 libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27 libgnutls28-dev
libgnutls30 libgnutlsxx28 libhogweed4 libicu57 libidn11-dev libmagic-mgc
libmagic1 libnettle6 libp11-kit-dev libp11-kit0 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6 libtasn1-6-dev
libtimedate-perl libtool libunbound2 libunistring0 libxml2 m4 man-db
nettle-dev pkg-config po-debconf time zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev
libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-filesystem1.62-dev libboost-graph1.62-dev
libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev
libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev
libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-python1.62-dev
libboost-random1.62-dev libboost-regex1.62-dev
libboost-serialization1.62-dev libboost-signals1.62-dev
libboost-system1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev
libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev
libmpfrc++-dev libntl-dev gmp-doc libgmp10-doc libmpfr-dev dns-root-data
gnutls-doc gnutls-bin libtool-doc gfortran | fortran95-compiler gcj-jdk
m4-doc less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur bzip2-doc libglib2.0-data shared-mime-info
xdg-user-dirs libtasn1-doc libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-dev
libcroco3 libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev
libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27 libgnutls28-dev
libgnutls30 libgnutlsxx28 libhogweed4 libicu57 libidn11-dev libmagic-mgc
libmagic1 libnettle6 libp11-kit-dev libp11-kit0 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6 libtasn1-6-dev
libtimedate-perl libtool libunbound2 libunistring0 libxml2 m4 man-db
nettle-dev pkg-config po-debconf sbuild-build-depends-ncbi-blast+-dummy time
zlib1g-dev
The following packages will be upgraded:
libgmp10 zlib1g
2 upgraded, 63 newly installed, 0 to remove and 61 not upgraded.
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Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
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Get:6 http://172.17.0.1/private stretch-staging/main armhf zlib1g armhf 1:1.2.8.dfsg-4 [81.6 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf libpcrecpp0v5 armhf 2:8.39-2 [149 kB]
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Get:36 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf debhelper all 10.2.3 [829 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libboost-system1.62.0 armhf 1.62.0+dfsg-4 [32.1 kB]
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Get:49 http://172.17.0.1/private stretch-staging/main armhf libgnutlsxx28 armhf 3.5.8-1 [11.7 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libunbound2 armhf 1.6.0-2 [326 kB]
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Get:54 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6-dev armhf 4.9-4 [95.1 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libp11-kit-dev armhf 0.23.3-2 [64.1 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf libidn11-dev armhf 1.33-1 [590 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf libgnutls28-dev armhf 3.5.8-1 [786 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf libpcre16-3 armhf 2:8.39-2 [235 kB]
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Setting up groff-base (1.22.3-9) ...
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Setting up m4 (1.4.18-1) ...
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Setting up libxml2:armhf (2.9.4+dfsg1-2.1) ...
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Setting up libgmp10:armhf (2:6.1.2+dfsg-1) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
Setting up autotools-dev (20161112.1) ...
Setting up libunistring0:armhf (0.9.6+really0.9.3-0.1) ...
Setting up libpcrecpp0v5:armhf (2:8.39-2) ...
Setting up libpcre32-3:armhf (2:8.39-2) ...
Setting up libffi6:armhf (3.2.1-6) ...
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Setting up bsdmainutils (9.0.12) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgmpxx4ldbl:armhf (2:6.1.2+dfsg-1) ...
Setting up autopoint (0.19.8.1-1) ...
Setting up libboost-system1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-4) ...
Setting up libfile-stripnondeterminism-perl (0.029-2) ...
Setting up libgmp-dev:armhf (2:6.1.2+dfsg-1) ...
Setting up libpcre3-dev:armhf (2:8.39-2) ...
Setting up libglib2.0-0:armhf (2.50.2-2) ...
No schema files found: doing nothing.
Setting up libtasn1-6-dev:armhf (4.9-4) ...
Setting up autoconf (2.69-10) ...
Setting up file (1:5.29-2) ...
Setting up libhogweed4:armhf (3.3-1) ...
Setting up libcroco3:armhf (0.6.11-2) ...
Setting up pkg-config (0.29-4) ...
Setting up libp11-kit0:armhf (0.23.3-2) ...
Setting up automake (1:1.15-5) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up nettle-dev (3.3-1) ...
Setting up libboost-chrono1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up libidn11-dev (1.33-1) ...
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Setting up libunbound2:armhf (1.6.0-2) ...
Setting up libboost-timer1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up gettext (0.19.8.1-1) ...
Setting up libgnutls30:armhf (3.5.8-1) ...
Setting up libp11-kit-dev:armhf (0.23.3-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libgnutlsxx28:armhf (3.5.8-1) ...
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Setting up libboost-test1.62.0:armhf (1.62.0+dfsg-4) ...
Setting up libgnutls-openssl27:armhf (3.5.8-1) ...
Setting up po-debconf (1.0.20) ...
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Setting up libboost-test1.62-dev:armhf (1.62.0+dfsg-4) ...
Setting up libboost-test-dev:armhf (1.62.0.1+b1) ...
Setting up dh-strip-nondeterminism (0.029-2) ...
Setting up debhelper (10.2.3) ...
Setting up dh-autoreconf (13) ...
Setting up sbuild-build-depends-ncbi-blast+-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.27.51.20161127-1 dpkg-dev_1.18.15 g++-6_6.2.1-5+rpi1 gcc-6_6.2.1-5+rpi1 libc6-dev_2.24-7+rpi1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4~beta1 autoconf_2.69-10 automake_1:1.15-5 autopoint_0.19.8.1-1 autotools-dev_20161112.1 base-files_9.7+rpi1 base-passwd_3.5.41 bash_4.4-2 binutils_2.27.51.20161127-1 bsdmainutils_9.0.12 bsdutils_1:2.29-1 build-essential_12.2 bzip2_1.0.6-8 coreutils_8.25-2 cpio_2.11+dfsg-6 cpp_4:6.1.1-1 cpp-6_6.2.1-5+rpi1 dash_0.5.8-2.3 debconf_1.5.59 debfoster_2.7-2.1 debhelper_10.2.3 debianutils_4.8.1 dh-autoreconf_13 dh-strip-nondeterminism_0.029-2 diffutils_1:3.5-1 dmsetup_2:1.02.136-1 dpkg_1.18.15 dpkg-dev_1.18.15 e2fslibs_1.43.3-1 e2fsprogs_1.43.3-1 fakeroot_1.21-2 file_1:5.29-2 findutils_4.6.0+git+20161106-1 fuse2fs_1.43.3-1 g++_4:6.1.1-1 g++-6_6.2.1-5+rpi1 gcc_4:6.1.1-1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-6_6.2.1-5+rpi1 gcc-6-base_6.2.1-5+rpi1 gettext_0.19.8.1-1 gettext-base_0.19.8.1-1 gnupg_2.1.16-2 gnupg-agent_2.1.16-2 gnupg-l10n_2.1.16-2 gpgv_2.1.16-2 grep_2.26-1 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 init_1.46 init-system-helpers_1.46 initscripts_2.88dsf-59.8 insserv_1.14.0-5.4 intltool-debian_0.35.0+20060710.4 kbd_2.0.3-2 klibc-utils_2.0.4-9+rpi1 kmod_23-1 libacl1_2.2.52-3 libapparmor1_2.10.95-6 libapt-pkg5.0_1.4~beta1 libarchive-zip-perl_1.59-1 libasan3_6.2.1-5+rpi1 libassuan0_2.4.3-2 libatomic1_6.2.1-5+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-1 libaudit1_1:2.6.7-1 libblkid1_2.29-1 libboost-chrono1.62.0_1.62.0+dfsg-4 libboost-system1.62.0_1.62.0+dfsg-4 libboost-test-dev_1.62.0.1+b1 libboost-test1.62-dev_1.62.0+dfsg-4 libboost-test1.62.0_1.62.0+dfsg-4 libboost-timer1.62.0_1.62.0+dfsg-4 libboost1.62-dev_1.62.0+dfsg-4 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.24-7+rpi1 libc-dev-bin_2.24-7+rpi1 libc6_2.24-7+rpi1 libc6-dev_2.24-7+rpi1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcap2-bin_1:2.25-1 libcc1-0_6.2.1-5+rpi1 libcomerr2_1.43.3-1 libcroco3_0.6.11-2 libcryptsetup4_2:1.7.3-2 libdb5.3_5.3.28-12 libdbus-1-3_1.10.14-1 libdebconfclient0_0.218 libdevmapper1.02.1_2:1.02.136-1 libdpkg-perl_1.18.15 libdrm2_2.4.74-1 libfakeroot_1.21-2 libfdisk1_2.29-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.029-2 libfuse2_2.9.7-1 libgc1c2_1:7.4.2-8 libgcc-6-dev_6.2.1-5+rpi1 libgcc1_1:6.2.1-5+rpi1 libgcrypt20_1.7.3-2 libgdbm3_1.8.3-14 libglib2.0-0_2.50.2-2 libgmp-dev_2:6.1.2+dfsg-1 libgmp10_2:6.1.2+dfsg-1 libgmpxx4ldbl_2:6.1.2+dfsg-1 libgnutls-dane0_3.5.8-1 libgnutls-openssl27_3.5.8-1 libgnutls28-dev_3.5.8-1 libgnutls30_3.5.8-1 libgnutlsxx28_3.5.8-1 libgomp1_6.2.1-5+rpi1 libgpg-error0_1.25-1 libhogweed4_3.3-1 libicu57_57.1-5 libidn11_1.33-1 libidn11-dev_1.33-1 libip4tc0_1.6.0-4 libisl15_0.17.1-1 libklibc_2.0.4-9+rpi1 libkmod2_23-1 libksba8_1.3.5-2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.29-2 libmagic1_1:5.29-2 libmount1_2.29-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160917-1 libncursesw5_6.0+20160917-1 libnettle6_3.3-1 libnpth0_1.3-1 libp11-kit-dev_0.23.3-2 libp11-kit0_0.23.3-2 libpam-modules_1.1.8-3.3 libpam-modules-bin_1.1.8-3.3 libpam-runtime_1.1.8-3.3 libpam0g_1.1.8-3.3 libpcre16-3_2:8.39-2 libpcre3_2:8.39-2 libpcre3-dev_2:8.39-2 libpcre32-3_2:8.39-2 libpcrecpp0v5_2:8.39-2 libperl5.24_5.24.1~rc4-1 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-6 libprocps6_2:3.3.12-3 libreadline7_7.0-1 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-1 libsemanage1_2.6-1 libsepol1_2.6-1 libsigsegv2_2.10-5 libsmartcols1_2.29-1 libsqlite3-0_3.15.2-1 libss2_1.43.3-1 libstdc++-6-dev_6.2.1-5+rpi1 libstdc++6_6.2.1-5+rpi1 libsystemd0_232-6 libtasn1-6_4.9-4 libtasn1-6-dev_4.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160917-1 libtool_2.4.6-2 libubsan0_6.2.1-5+rpi1 libudev1_232-6 libunbound2_1.6.0-2 libunistring0_0.9.6+really0.9.3-0.1 libusb-0.1-4_2:0.1.12-30 libustr-1.0-1_1.0.4-6 libuuid1_2.29-1 libxml2_2.9.4+dfsg1-2.1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.3 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9 makedev_2.3.1-93 man-db_2.7.6.1-2 manpages_4.08-1 mawk_1.3.3-17 mount_2.29-1 multiarch-support_2.24-7+rpi1 ncurses-base_6.0+20160917-1 ncurses-bin_6.0+20160917-1 netbase_5.3 nettle-dev_3.3-1 passwd_1:4.2-3.3 patch_2.7.5-1 perl_5.24.1~rc4-1 perl-base_5.24.1~rc4-1 perl-modules-5.24_5.24.1~rc4-1 pinentry-curses_0.9.7-9 pkg-config_0.29-4 po-debconf_1.0.20 procps_2:3.3.12-3 psmisc_22.21-2.1 raspbian-archive-keyring_20120528.2 readline-common_7.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.2.2-8 sensible-utils_0.0.9 startpar_0.59-3.1 systemd_232-6 systemd-sysv_232-6 sysv-rc_2.88dsf-59.8 sysvinit-utils_2.88dsf-59.8 tar_1.29b-1.1 time_1.7-25.1 tzdata_2016j-2 udev_232-6 util-linux_2.29-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-4 zlib1g-dev_1:1.2.8.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Jan 16 18:15:15 2017 UTC
gpgv: using RSA key 78DC68DB326D8438
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.6.0-1.dsc
dpkg-source: info: extracting ncbi-blast+ in /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0
dpkg-source: info: unpacking ncbi-blast+_2.6.0.orig.tar.gz
dpkg-source: info: unpacking ncbi-blast+_2.6.0-1.debian.tar.xz
dpkg-source: info: applying enable_clean_after_failed_compile
dpkg-source: info: applying hurd_fixes
dpkg-source: info: applying legacy_rename_rpsblast
dpkg-source: info: applying fix_lib_deps
dpkg-source: info: applying no_multiarch_rpath
dpkg-source: info: applying use_pie_for_apps
dpkg-source: info: applying skip_services_unit_test
dpkg-source: info: applying fix_configure
dpkg-source: info: applying support_x32
dpkg-source: info: applying suppress_gnutls_version_check
dpkg-source: info: applying optionally_keep_sequence
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-be347771-6ef8-4d8f-bead-709c7494da09
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ncbi-blast+
dpkg-buildpackage: info: source version 2.6.0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build ncbi-blast+-2.6.0
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean -Dc++ --with autotools_dev
dh_testdir -O-Dc\+\+
dh_auto_clean -O-Dc\+\+
dh_autotools-dev_restoreconfig -O-Dc\+\+
debian/rules override_dh_clean
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
cp c++/configure.orig configure.orig.save
dh_clean
#Tricky - for each module directory there may be several module files
#or there may be none but then there is still a module named after the
#directory. Clean everything!
for x in c++/src/objects/* ; do \
(cd "$x" && ( \
mods="`echo *.module`" ; \
[ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \
for mod in $mods ; do \
../../../BUILD/build/new_module.sh $mod purge_sources ; \
done ) ; \
) ; \
done
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
debian/rules:102: recipe for target 'override_dh_clean' failed
make[1]: [override_dh_clean] Error 127 (ignored)
rm -rf c++/compilers/dll c++/config.log c++/Makefile
rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module
find -name check_exec.pid -delete
rm -rf c++/BUILD
mv configure.orig.save c++/configure.orig
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
debian/rules build-arch
dh build-arch -Dc++ --with autotools_dev
dh_testdir -a -O-Dc\+\+
dh_update_autotools_config -a -O-Dc\+\+
dh_autotools-dev_updateconfig -a -O-Dc\+\+
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \
CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug --without-downloaded-vdb --with-symbols CFLAGS_FOR_BUILD="-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed" \
|| (tail -v -n +0 config.log BUILD/status/config.log; exit 1)
configure: loading site script ./src/build-system/config.site
configure: creating cache config.cache
checking TeamCity build number... none
checking Subversion revision... unknown
checking NCBI stable components' version... unknown
checking build system type... armv7l-unknown-linux-gnueabihf
checking host system type... armv7l-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
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checking how to run the C preprocessor... gcc -E
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
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adjusted C compiler: /usr/bin/gcc
adjusted C++ compiler: /usr/bin/g++
checking whether /usr/bin/gcc has an option to export all symbols... -Wl,-export-dynamic
checking whether /usr/bin/gcc supports -Wl,--{en,dis}able-new-dtags... yes
checking whether _LIBCPP_VERSION is declared... no
checking how to enable C++ '11 features in /usr/bin/g++ ... -std=gnu++11
checking how to enable C '11 or at least '99 features in /usr/bin/gcc ... -std=gnu11 -fgnu89-inline
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checking whether ln -s works... yes
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checking ranlib's effectiveness... neutral
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checking how to run the C preprocessor... gcc -E
checking whether cross-directory hard links work... yes
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checking size of long double... 8
checking for long long... yes
checking size of long long... 8
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checking size of short... 2
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checking size of __int64... 0
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checking which way the stack grows... up
checking whether the preprocessor supports C99-style variadic macros... yes
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checking syntax for marking deprecated functions... __attribute__((__deprecated__))
checking how to force inlining... inline __attribute__((always_inline))
checking whether the C compiler supports __attribute__((destructor))... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports __attribute__((visibility("default")))... (cached) unnecessary
checking whether the C compiler supports C99 restrict... __restrict__
checking whether the C++ compiler supports C99 restrict... __restrict__
checking syntax for marking functions that never return... __attribute__((__noreturn__))
checking syntax for marking functions whose result should be checked... __attribute__((warn_unused_result))
checking syntax for declaring thread-local variables... __thread
checking syntax for marking types as packed to save memory... __attribute__((__packed__))
checking whether FIONBIO requires BSD_COMP to be defined... no
checking whether INADDR_NONE is defined... yes
checking whether unaligned reads are permissible... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports SIMD vector arithmetic... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -funsafe-math-optimizations... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -msse4.1... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -maes... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -fdiagnostics-color=always... yes
checking whether in-house NCBI resources are available... no
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checking for connect in -lsocket... no
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checking for library containing setkey... -lcrypt
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checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for libz... yes
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/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/configure: 1: ./configure.lineno: : Permission denied
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configure: looking for configurables below /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++...
configure: ...done
configure: updating cache config.cache
configure: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/config.status
config.status: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html/Makefile
config.status: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split/Makefile
config.status: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util/Makefile
config.status: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/Makefile
config.status: creating /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders/Makefile
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config.status: executing default commands
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib/ncbicfg.c is updated
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc/common/ncbi_build_ver.h is updated
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/helpers TMPL=run_with_lock -kw all
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
gcc -c -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o
gcc -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -fPIE -pie run_with_lock.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lm -lpthread -o run_with_lock
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f run_with_lock /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/run_with_lock
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
Platform not defined for Linux armv7l -- please fix me
project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/4.1.5/project_tree_builder
Will build project_tree_builder locally
**********************************************************************
Building project_tree_builder
**********************************************************************
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make[3] (Makefile.precompile): Nothing to be done for `all'.
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make[2] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[2] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[2] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib TMPL=corelib -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_os_unix.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/blob_storage.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/blob_storage.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ddumpable.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ddumpable.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/env_reg.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/metareg.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_config.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/blob_storage.cpp -o blob_storage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ddumpable.cpp -o ddumpable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/env_reg.cpp -o env_reg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/metareg.cpp -o metareg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REEIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_param.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_process.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_safe_static.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_signal.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_signal.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_stack.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_system.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiapp.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -WformaIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiargs.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiargs.cpp: In function 'std::__cxx11::string ncbi::s_CArgs_ReadFromConsole(const string&, ncbi::EEchoInput, const char*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiargs.cpp:2058:56: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, prompt.data(), prompt.length());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiargs.cpp:2087:50: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, thx.data(), thx.length());
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiatomic.cpp:45:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidbg.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:854:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:42:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbidiag.hpp:1810:34: note: declared here
NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:1824:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:1887:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:1912:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:1944:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:3226:48: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations]
app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:354:34: note: declared here
NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void);
^~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag_p.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag_p.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbidll.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidll.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
t -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include ncbicfg.c -o ncbicfg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbidll.cpp -o ncbidll.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbienv.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexec.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiexec.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiexpt.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbifile.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimempool.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbimempool.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbimtx.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiobj.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbienv.cpp -o ncbienv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbifile.cpp -o ncbifile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o
/usr/bin/g++ -std=gnu++11 -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbireg.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbistr.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbistre.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbithr.cpp:45:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbitime.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/obj_store.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/obj_store.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbireg.cpp -o ncbireg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbistr.cpp -o ncbistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbistre.cpp -o ncbistre.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbithr.cpp -o ncbithr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbitime.cpp -o ncbitime.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/obj_store.cpp -o obj_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/plugin_manager.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/plugin_manager_store.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/stream_utils.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/syslog.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/syslog.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/version.cpp:457:12: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/version.cpp:457:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/version.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/request_ctx.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/stream_utils.cpp -o stream_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/syslog.cpp -o syslog.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/request_ctx.cpp -o request_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/request_control.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/expr.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/expr.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/resource_info.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/interprocess_lock.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_autoinit.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/perf_log.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/perf_log.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/request_control.cpp -o request_control.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/expr.cpp -o expr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/resource_info.cpp -o resource_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/perf_log.cpp -o perf_log.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-piIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_toolkit.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbierror.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_url.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_cookies.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_message.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_message.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
e-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbierror.cpp -o ncbierror.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/guard.cpp -o guard.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/ncbi_message.cpp -o ncbi_message.o
/bin/rm -f libxncbi.so .libxncbi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxncbi.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxncbi.so
/bin/ln -f .xncbi.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xncbi.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib TMPL=test_mt -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_mt.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/test_mt.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/test_mt.cpp -o test_mt.o
/bin/rm -f libtest_mt.so .libtest_mt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_mt.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libtest_mt.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libtest_mt.so
/bin/ln -f .test_mt.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.test_mt.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib TMPL=test_boost -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/test_boost.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/test_boost.cpp -o test_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o
/bin/rm -f libtest_boost.so .libtest_boost.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libtest_boost.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libtest_boost.so
/bin/ln -f .test_boost.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.test_boost.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
/usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util TMPL=util -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/random_gen.cpp:75:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/utf8.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/utf8.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/checksum.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/bytesrc.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strbuffer.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/strbuffer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/itree.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/random_gen.cpp -o random_gen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/utf8.cpp -o utf8.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/checksum.cpp -o checksum.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/bytesrc.cpp -o bytesrc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/strbuffer.cpp -o strbuffer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/itree.cpp -o itree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/nIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/smalldns.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool_old.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ddump_viewer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/strsearch.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/logrotate.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/logrotate.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/format_guess.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/ascii85.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ascii85.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/smalldns.cpp -o smalldns.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/strsearch.cpp -o strsearch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/logrotate.cpp -o logrotate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/format_guess.cpp -o format_guess.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ascii85.cpp -o ascii85.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITSIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/md5.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/md5.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/file_obsolete.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/file_obsolete.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/unicode.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/dictionary.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/static_map.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp: In static member function 'static void ncbi::CDictionaryUtil::Stem(const string&, std::__cxx11::string*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp:709:29: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_nonstop.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_nonstop.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/sgml_entity.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sgml_entity.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/md5.cpp -o md5.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/file_obsolete.cpp -o file_obsolete.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/unicode.cpp -o unicode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary.cpp -o dictionary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/dictionary_util.cpp -o dictionary_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sgml_entity.cpp -o sgml_entity.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/static_set.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/transmissionrw.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/mutex_pool.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/mutex_pool.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/ncbi_cache.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ncbi_cache.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/line_reader.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/ncbi_table.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/util_exception.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/static_set.cpp -o static_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/transmissionrw.cpp -o transmissionrw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/miscmath.c -o miscmath.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/mutex_pool.cpp -o mutex_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/line_reader.cpp -o line_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/util_exception.cpp -o util_exception.o
/usr/bin/g++ -stdIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/multi_writer.cpp:32:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/itransaction.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/itransaction.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/thread_pool_ctrl.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool_ctrl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/scheduler.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/uttp.cpp -o uttp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/multi_writer.cpp -o multi_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/itransaction.cpp -o itransaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool.cpp -o thread_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/scheduler.cpp -o scheduler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/distribution.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/distribution.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/rangelist.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/util_misc.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/table_printer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/table_printer.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/retry_ctx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/stream_source.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/distribution.cpp -o distribution.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/rangelist.cpp -o rangelist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/util_misc.cpp -o util_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/histogram_binning.cpp -o histogram_binning.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/table_printer.cpp -o table_printer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/retry_ctx.cpp -o retry_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/stream_source.cpp -o stream_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/file_manifest.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
OURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/file_manifest.cpp -o file_manifest.o
/bin/rm -f libxutil.so .libxutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxutil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxutil.so
/bin/ln -f .xutil.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xutil.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/regexp TMPL=regexp -w mark-as-disabled
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/make[2] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
/usr/bin/make[2] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp TMPL=xregexp -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/xregexp/regexp.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/regexp.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/xregexp/arg_regexp.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/arg_regexp.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/xregexp/mask_regexp.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/mask_regexp.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/regexp.cpp -o regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o
/bin/rm -f libxregexp.so .libxregexp.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxregexp.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxregexp.so
/bin/ln -f .xregexp.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xregexp.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp TMPL=xregexp_template_tester -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/regexp_template_tester.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o
/bin/rm -f libxregexp_template_tester.so .libxregexp_template_tester.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp_template_tester.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp_template_tester.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxregexp -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxregexp_template_tester.so
/bin/ln -f .xregexp_template_tester.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xregexp_template_tester.dep
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/file_contents.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_configure.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_configure.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_makefile.hpp:31,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_makefile.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blaIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_project_context.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_site.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_builder_app.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
st+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree_builder.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_src_resolver.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_utils.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/resolver.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_projeIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_projects.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_projects.cpp:30:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/configurable_file.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/configurable_file.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_gui.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/mac_prj_generator.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cts.cpp -o proj_projects.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerrIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
or=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f project_tree_builder /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/project_tree_builder
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
**********************************************************************
Running project_tree_builder. Please wait.
**********************************************************************
./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ src Makefile.flat
Done
===============================================================================
NCBI C++ Toolkit documentation:
Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/
Local: ./doc/public/index.html
For the available configuration flags run: ./configure --help
CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC
CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O
LIBRARIES: build as dynamic by default
FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux
PACKAGES:
enabled: Iconv Z BZ2 PCRE GMP GMP NETTLE NETTLE GNUTLS Boost.Spirit Boost.Test.Included
disabled: UUID FUSE LocalZ LocalBZ2 LZO LocalPCRE GCRYPT OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON25 PYTHON26 PYTHON27 PYTHON3 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC VDB OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF UNGIF GIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO Cereal SASL2 MONGODB GMOCK LAPACK LMDB
PROJECTS:
enabled: cgi serial objects app algo
disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench
Tools / flags / paths: /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.mk
Configuration header: /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc/ncbiconf_unix.h
To build everything: cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build && /usr/bin/make all_r
or simply run /usr/bin/make in the current directory
Alternatively, cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build && /usr/bin/make -f Makefile.flat
******* CONFIGURATION SUCCESSFUL *******
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
cd c++/BUILD/build && \
make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/"
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
/usr/bin/make -w -j --jobserver-fds=3,4 -f Makefile.flat ptb_all.real MTARGET=
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'.
/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'.
cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast -w -j --jobserver-fds=3,4 all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/legacy_blast.pl
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast -w -j --jobserver-fds=3,4 all
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/update_blastdb.pl
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker -w -j --jobserver-fds=3,4 all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'.
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/windowmasker_2.2.22_adapter.py
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j --jobserver-fds=3,4 all
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/tables TMPL=tables -w -j --jobserver-fds=3,4 all
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function]
s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n)
^~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect TMPL=xconnect -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/.#lock-map.
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o
/bin/rm -f libtables.so .libtables.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC raw_scoremat.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libtables.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libtables.so
/bin/ln -f .tables.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.tables.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/bmake[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_types.c -o ncbi_types.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.c -o ncbi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_core.c -o ncbi_core.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_util.c:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_util.c:148:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(1, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:77:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_DoLog':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:503:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(112, level,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:195:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:543:13: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(109, level, data, size,
^~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:576:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(113, level,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:584:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:866:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not"
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_gethostname':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1011:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX'
CORE_LOG_ERRNO_EXX(103, eLOG_Error,
^~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1020:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(104, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1153:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(106, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1193:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1219:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(155, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1350:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(108, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1493:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(111, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Select_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1618:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(145, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1747:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(5, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Poll_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:1891:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2036:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2610:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2620:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(6, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2655:25: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Recv':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2806:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(7, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Read_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:2987:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Send':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3337:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(11, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_WritePending':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3489:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(12, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Shutdown':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3661:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3698:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(127, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3747:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(16, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Close_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3811:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(17, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3827:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(18, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3857:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(19, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:3916:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Connect_':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4022:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(131, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4039:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(142, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4063:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4084:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(23, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(24, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4143:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(151, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4154:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(135, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4174:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(129, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4215:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(25, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4259:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(26, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Create':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4345:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(27, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function]
s_DistinctAlignmentsLength(BlastCompo_Alignment * list)
^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function]
s_AlignmentsAreSorted(BlastCompo_Alignment * alignments)
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4398:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(47, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4421:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(148, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4459:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(48, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4500:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(50, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4514:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(49, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4577:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(132, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4599:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(153, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4610:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(138, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4630:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(124, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4645:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(43, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_CreateListening':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4697:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(144, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4731:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(34, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4777:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(35, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4832:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4853:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(150, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4904:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(38, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4923:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(37, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4974:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(110, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:4988:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(115, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_Accept':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5035:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(39, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5091:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(40, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5150:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(41, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5209:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(42, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5220:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(152, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5231:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(137, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5251:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(128, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_CloseListening':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5296:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(44, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5325:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(45, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5413:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5461:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(94, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 's_SendMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5496:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(154, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5512:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(88, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(89, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5571:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(90, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5617:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(91, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5660:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(28, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5670:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5682:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(29, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5692:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5711:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(116, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5773:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(117, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:5984:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(46, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6172:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(52, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6182:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(53, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6194:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(51, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6224:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(54, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6231:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(55, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6239:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6369:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(56, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6397:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(57, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6411:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(58, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6425:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(59, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6434:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(60, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6444:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(61, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6454:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(62, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6591:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(63, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6632:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(64, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6674:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(65, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6684:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(66, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6715:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(125, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6791:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(67, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6843:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(68, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6870:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(69, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6880:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(70, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6899:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(71, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:6906:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(72, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7057:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(73, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7120:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(158, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7127:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(159, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7140:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(160, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7157:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(156, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7164:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(157, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7177:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(75, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7218:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(76, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7257:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(77, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7307:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(130, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7337:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(79, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7344:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(78, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7378:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(114, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7407:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(82, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7414:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(81, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7433:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(83, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7446:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(84, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7475:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(85, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7503:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(96, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7510:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(95, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(93, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7556:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(92, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7593:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(87, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7600:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(86, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7632:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(98, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7639:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(97, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7659:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(99, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7677:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(101, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7684:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(100, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7704:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(102, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:7866:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(74, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:114:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1373:9: note: in expansion of macro 'LOG_WRITE'
LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11,
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1594:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1607:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSL':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c:8257:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Cannot reset SSL while it is in use");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1635:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1646:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1692:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1705:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1744:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1777:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(9, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c:1817:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
last/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o
/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libcomposition_adjustment.so
/bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.composition_adjustment.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil TMPL=sequtil -w -j --jobserver-fds=3,4 all
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/creaders TMPL=creaders -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'x_ReInit':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:273:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:303:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, Close,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:307:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, ReInit, eLOG_Error,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 's_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:384:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(5, Open, eLOG_Error, "Failed to open connection");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:426:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(2, Create, eLOG_Error, "NULL connector");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Description':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:490:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:546:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:569:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(11, GetTimeout, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:584:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:644:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:665:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(16, Write, eLOG_Critical, "Cannot write data");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:707:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(17, Write, level, "Unable to write data");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Write':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:819:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:844:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(22, Read, eLOG_Critical, "Cannot read data");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:885:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(32, Read, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:911:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(23, Read, level, "Unable to read data");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Read':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1059:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(35, ReadLine, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Status':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_Close':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1143:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(34, eLOG_Error,
^~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(33, eLOG_Error,
^~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_connector.c:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(163, eLOG_Error,
^~~~~~~~~~~
compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_util.c -o ncbi_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket.c -o ncbi_socket.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connection.c -o ncbi_connection.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_connector.c -o ncbi_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:367:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:382:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:408:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:423:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:433:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:457:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_Connect':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:560:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:700:25: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(20, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:911:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1042:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1113:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(24, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1137:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(25, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1211:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(7, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1248:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, level,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:195:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1310:9: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1327:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:195:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1346:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1394:25: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1553:21: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1569:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(11, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1624:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1629:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages)
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1640:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:195:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1648:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(14, eLOG_Note, s, n,
^~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1657:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c: In function 's_Read':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1828:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c:1872:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Warning,
^~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/creaders/alnread.c -o alnread.o
/bin/rm -f libcreaders.so .libcreaders.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC alnread.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libcreaders.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libcreaders.so
/bin/ln -f .creaders.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.creaders.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_convert.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_convert_imp.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:243:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:264:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:288:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:297:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:326:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(34, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:422:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:630:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:636:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:683:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:805:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:811:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:824:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:832:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:844:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(14, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:856:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:862:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:876:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:887:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:894:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:916:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(30, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:951:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(31, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:978:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(32, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Walk':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1000:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(28, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1014:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(26, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1017:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(27, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1029:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1116:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1131:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1149:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1160:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1176:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c:1278:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(33, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info.cpp: In member function 'void ncbi::CGeneInfo::ToString(std::__cxx11::string&, bool, const string&, unsigned int) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:177:60: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(GetDescription(), " ", strDescrWords);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_manip.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=connect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect TMPL=connect -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/run_with_lock: Adjusting base from make_connect to make__connect_common per /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/.#lock-map.
Waiting for /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect/make__connect_common.lockIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c: In function 'x_ServiceName':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c:84:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c:93:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c: In function 'x_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c:321:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
.blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service.c -o ncbi_service.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o
/usr/bin/gcc -stIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_dispd.c:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_dispd.c: In function 's_Resolve':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:94:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:169:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=]
if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:170:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=]
|| sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c: In function 's_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:821:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:847:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c:1036:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/sequtil/sequtil.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_tables.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_tables.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:389:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(3, "Recipient address is too long");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:392:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:400:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(4, write_error);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:403:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(5, proto_error, buf);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:455:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(6, "Invalid magic cookie");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:460:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(7, "At least one message recipient must be specified");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:470:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:477:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:482:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(10, "Unable to get local host name");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:487:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(11, "Write error in HELO command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:490:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:495:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(13, "Write error in MAIL command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:498:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(15, "Write error in DATA command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:521:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:552:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(32, "Write error in sending Date");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:559:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(33, "Write error in sending From");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:567:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(17, "Write error in sending Subject");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:574:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(18, "Write error in sending To");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:581:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(19, "Write error in sending Cc");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:585:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:596:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(20, "Write error in sending mailer information");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:623:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(21, "Write error while sending custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:626:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(22, "Header write error");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:628:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(23, "Write error while finalizing custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:636:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(24, "Write error in message body delimiter");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:662:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(25, "Write error while sending message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(26, "Body write error");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(27, "Write error while finalizing message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:671:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(28, "Write error while finalizing message");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:676:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:340:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:679:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(30, "Write error in QUIT command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:352:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c:681:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer);
^~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:50:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:143:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:148:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:162:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:166:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:180:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:283:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:359:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:592:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:950:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:1110:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:1635:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:1901:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:1976:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c:2286:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented");
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_shared.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil.cpp -o sequtil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o
/bin/rm -f libsequtil.so .libsequtil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libsequtil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libsequtil.so
/bin/ln -f .sequtil.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.sequtil.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html TMPL=html -w -j --jobserver-fds=3,4 all
.d=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lb.c -o ncbi_lb.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_local.c -o ncbi_local.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringConcat':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:433:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringNConcat':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:458:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_RegGet':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:483:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:497:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_GetLBOSAddressEx':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:565:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Getting LBOS addresses...");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:579:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Warning, "Use of custom LBOS address was "
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:586:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Warning, "Did not manage to copy custom "
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:594:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Warning, "Trying to find LBOS using "
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:604:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Warning, "Trying to find LBOS in "
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ReadLbosresolver':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:723:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("LBOS mapper: "
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:731:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_ReadLBOSResolve: "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:739:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning,
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:756:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (s_LBOS_Lbosresolver == NULL)
^~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:759:9: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
s_LBOS_Lbosresolver = strdup(str + 7);
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConnectURL':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:822:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("Parsing URL \"%s\"", url));
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:824:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot parse URL");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:827:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("Creating HTTP%s connector",
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:834:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create HTTP connector");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:837:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Note, "Creating connection");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:839:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create connection");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_UrlReadAll':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:898:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_UrlReadAll: No RAM. "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:910:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned "
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:938:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:952:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer shrink error, using "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ResolveIPPort':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:984:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1043:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_FillCandidates':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1183:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Trying to find servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1189:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Ho servers of \"%s\" found by LBOS",
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1194:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1207:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckAnnounceArgs':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1237:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1244:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, missing http:// or "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1254:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1264:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, incorrect port.");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1268:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1273:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1278:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckDeannounceArgs':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1292:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1298:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1303:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1308:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Replace0000WithIP':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1393:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1401:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1408:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConstructData':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1552:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Could not allocate memory for LBOS mapper");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Initialize':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1623:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Trace, "No DTAB in registry");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1625:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1634:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Note, "LBOS is turned ON in config.");
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1636:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1652:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ParseHeader':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1700:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned status "
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Reset':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1763:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_Reset: No RAM. "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'SERV_LBOS_Open':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1889:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Mask was provided instead of service name. "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1897:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "\"iter->name\" is null, not able "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1912:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Could not concatenate dbaf with service "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1927:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:1936:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Announce':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2061:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Announce failed. No LBOS found.");
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2066:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2075:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2085:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "g_LBOS_Announce: LBOS answered 200 OK, but "
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2098:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Announce':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2164:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'LBOS_AnnounceFromRegistry':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2233:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2240:53: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=]
if (strlen(port_str) > 5 || (sscanf(port_str, "%d", &port) != 1) ||
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Deannounce':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2355:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_DNSResolve, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'LBOS_DeannounceAll':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2413:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckConfArgs':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2465:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2472:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c: In function 'LBOS_ServiceVersionSet':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:143:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c:2564:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/node.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/parson.c: In function 'remove_comments':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/parson.c:282:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for (i = 0; i < (ptr - string) + end_token_len; i++)
^~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/parson.c:284:12: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'for'
string = ptr + end_token_len - 1;
^~~~~~
./build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp: In static member function 'static void ncbi::CGeneFileUtils::ReadGeneInfo(ncbi::CNcbiIfstream&, int, ncbi::CRef<ncbi::CGeneInfo>&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:161:42: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(strBuf, "\t", strItems);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
.make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o
/bin/rm -f libgene_info.so .libgene_info.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libgene_info.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libgene_info.so
/bin/ln -f .gene_info.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.gene_info.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/html.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_socket_unix.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_cxx.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/htmlhelper.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_core_cxx.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/page.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_base64.c -o ncbi_base64.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_version.c -o ncbi_version.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/parson.c -o parson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/email_diag_handler.cpp -o email_diag_hand.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/email_diag_handler.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/email_diag_handler.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_streambuf.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/pager.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_stream.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.....cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'.
.make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j --jobserver-fds=3,4 all
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/selection.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/node.cpp -o node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/html.cpp -o html.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/htmlhelper.cpp -o htmlhelper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/page.cpp -o page.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/pager.cpp -o pager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/selection.cpp -o selection.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/components.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/components.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_namedpipe.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
...In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/commentdiag.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/commentdiag.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_namedpipe_connector.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f gene_info_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/gene_info_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial TMPL=serial -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/indentstream.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/indentstream.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/hookdata.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_pipe.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/node.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/html_exception.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/hookdatakey.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/htmlhelper.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/writer_htmlenc.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/components.cpp -o components.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/commentdiag.cpp -o commentdiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/indentstream.cpp -o indentstream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/html_exception.cpp -o html_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o
/bin/rm -f libxhtml.so .libxhtml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxhtml.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxhtml.so
/bin/ln -f .xhtml.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xhtml.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeinfo.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeinfo.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_pipe.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_pipe_connector.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_pipe_connector.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectinfo.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
...In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_conn_reader_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_reader_writer.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectiter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectio.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectiter.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectiter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectiter.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectio.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectio.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
.make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/hookdata.cpp -o hookdata.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/hookdatakey.cpp -o hookdatakey.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeinfo.cpp -o typeinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectinfo.cpp -o objectinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectiter.cpp -o objectiter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objectio.cpp -o objectio.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THR.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_userhost.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeref.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typemap.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeref.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_session.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stdtypes.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypesimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stdtypes.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/enumerated.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/enumerated.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/enumerated.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
.....In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/ptrinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/ptrinfo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
..In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/autoptrinfo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/continfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/continfo.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/autoptrinfo.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
.EAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typeref.cpp -o typeref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/typemap.cpp -o typemap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stdtypes.cpp -o stdtypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/enumerated.cpp -o enumerated.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/ptrinfo.cpp -o ptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/continfo.cpp -o continfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SO.cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api TMPL=compress -w -j --jobserver-fds=3,4 all
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypesimpl.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stltypes.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/compress.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stltypes.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
.D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/uIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c: In function 'x_GnuTlsLogger':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:160:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("GNUTLS%d: %.*s", level, len, message));
^~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsCreate':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:293:5: warning: 'gnutls_connection_end_t' is deprecated [-Wdeprecated-declarations]
gnutls_connection_end_t end = (side == eSOCK_Client
^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:59:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsInit':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:220:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:235:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:609:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("GNUTLS V%s (Loglevel=%d)",
^~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_priv.h:214:33: warning: 'version' may be used uninitialized in this function [-Wmaybe-uninitialized]
_mess.message = NcbiMessagePlusError(&_mess.dynamic, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c:582:17: note: 'version' was declared here
const char* version;
^~~~~~~
.sr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o
/bin/rm -f libxconnect.so .libxconnect.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o parson.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_gnutls.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxncbi -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxconnect.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxconnect.so
/bin/ln -f .xconnect.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xconnect.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/stream.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.
Acquired /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect/make__connect_common.lock for PID 18903 (make__connect_common)
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/bin/rm -f libconnect.so .libconnect.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libconnect.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o parson.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libconnect.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libconnect.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libconnect.so
/bin/ln -f .connect.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.connect.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi TMPL=cgi -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/.#lock-map.
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/memberid.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/memberlist.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbicgi.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/streambuf.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfob.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/member.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfob.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream_util.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/stream_util.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/member.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/bzip2.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/bzip2.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
URCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/stltypes.cpp -o stltypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/memberid.cpp -o memberid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/memberlist.cpp -o memberlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/item.cpp -o item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfob.cpp -o classinfob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/member.cpp -o member.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfo.cpp -o classinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-coIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/classinfo.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/variant.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/variant.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/zlib.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgiapp.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgictx.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/classinfob.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/choice.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choice.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choice.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/compress.cpp -o compress.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/stream.cpp -o stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/streambuf.cpp -o streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/stream_util.cpp -o stream_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/bzip2.cpp -o bzip2.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/zlib.cpp -o zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choiceptr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/choiceptr.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choiceptr.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/lzo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/reader_zlib.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/reader_zlib.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/aliasinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/aliasinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/aliasinfo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbicgir.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/tar.cpp:52:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistr.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbires.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistr.cpp:46:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/ref_args.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ref_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgiapp.cpp -o cgiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgictx.cpp -o cgictx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ncbires.cpp -o ncbires.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/ref_args.cpp -o ref_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbiIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/cgiapp.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_run.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/ncbi_url.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/cgi_util.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_serial.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_session.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostr.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostr.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/cgi_exception.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_exception.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgiapp_cached.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/impl/cgi_entry_reader.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_entry_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objcopy.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_run.cpp -o cgi_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_util.cpp -o cgi_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_session.cpp -o cgi_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objcopy.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objcopy.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/cgi/user_agent.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/user_agent.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/variant.cpp -o variant.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choice.cpp -o choice.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/choiceptr.cpp -o choiceptr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/aliasinfo.cpp -o aliasinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistr.cpp -o objistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostr.cpp -o objostr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objcopy.cpp -o objcopy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/iterator.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectiter.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/iterator.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serial.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serial.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/archive_.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive_.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/compress/zlib.hpp:54,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive_zip.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive_zip.cpp:45:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c: In function 'ncbi::tinfl_status ncbi::tinfl_decompress(ncbi::tinfl_decompressor*, const mz_uint8*, size_t*, ncbi::mz_uint8*, ncbi::mz_uint8*, size_t*, ncbi::mz_uint32)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c:1531:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c:1531:47: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'for'
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c: In function 'void ncbi::tdefl_find_match(ncbi::tdefl_compressor*, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint*, ncbi::mz_uint*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c:2361:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/miniz/miniz.c:2361:23: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^
FSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/cgi/user_agent.cpp -o user_agent.o
/bin/rm -f libxcgi.so .libxcgi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcgi.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxcgi.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxcgi.so
/bin/ln -f .xcgi.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xcgi.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core TMPL=blast -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_engine.c:1489:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_engine.c:1627:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_engine.c:1705:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/delaybuf.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buiIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/delaybuf.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ld/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFI/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastAaScanSubject;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastSmallAaScanSubject;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c: In function 's_BlastNaHashLookupFinalize':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c:1682:36: warning: ISO C forbids passing argument 3 of 's_NaHashLookupRemovePolyAWords' between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback, lookup->mask);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c:1605:13: note: expected 'TNaLookupHashFunction {aka unsigned int (*)(unsigned char *, unsigned int)}' but argument is of type 'void *'
static Int2 s_NaHashLookupRemovePolyAWords(BackboneCell** thin_backbone,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c:1875:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback = FNV_hash;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c:1911:43: warning: ISO C forbids passing argument 7 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback,
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/core/blast_nalookup.h:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/core/blast_lookup.h:169:6: note: expected 'TNaLookupHashFunction {aka unsigned int (*)(unsigned char *, unsigned int)}' but argument is of type 'void *'
void BlastHashLookupIndexQueryExactMatches(BackboneCell **backbone,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:293:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1320:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1322:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1360:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1364:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_1Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1368:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_2Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:1372:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_3Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2620:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_MB_DiscWordScanSubject_TwoTemplates_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2622:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2624:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2626:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2634:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2636:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2638:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2643:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2645:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2647:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2649:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2655:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2658:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2661:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2664:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2676:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 's_BlastNaHashLookupRetieveHits':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(TNaLookupHashFunction)lookup->hash_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:2997:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:3000:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:3003:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_MBScanSubject_Any;
^
ILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/lzo.cpp -o lzo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/tar.cpp -o tar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive.cpp -o archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive_.cpp -o archive_.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o
/bin/rm -f libxcompress.so .libxcompress.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxcompress.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxcompress.so
/bin/ln -f .xcompress.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xcompress.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/exception.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/exception.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objhook.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
LE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_message.c -o blast_message.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_options.c -o blast_options.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-bIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/exception.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:485:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback))
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1619:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1620:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1632:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1633:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1640:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1641:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1654:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1720:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1722:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1792:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_MBLookup;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1796:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1801:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1805:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_SmallNaLookup;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1809:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1813:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1815:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtend;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1822:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_NaLookup;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1826:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1829:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1831:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 'JumperNaWordFinder':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1971:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1983:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1991:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:1998:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:2011:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c: In function 'ShortRead_IndexedWordFinder':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:2184:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/na_ungapped.c:2186:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objhook.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/iterator.cpp -o iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serial.cpp -o serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/delaybuf.cpp -o delaybuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/pack_string.cpp -o pack_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/exception.cpp -o exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objhook.cpp -o objhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/oIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objlist.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objstack.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasn.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrasn.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasn.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasn.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasnb.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrasn.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasn.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
last+-2.6.0/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/us/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (strcasecmp("mapper", program) == 0)
^~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
return 0;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrasnb.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasnb.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
r/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_util.c -o blast_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIF/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/link_hsps.c: In function 's_FwdCompareHSPs':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/link_hsps.c:133:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (h1->context > h2->context)
^~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/link_hsps.c:136:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
if (h1->query.offset < h2->query.offset)
^~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasnb.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrasnb.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasnb.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_encodibjlist.cpp -o objlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objstack.cpp -o objstack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasn.cpp -o objostrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasn.cpp -o objistrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrasnb.cpp -o objostrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrasnb.cpp -o objistrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrxml.cpp -o objostrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUIIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrxml.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrxml.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrxml.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrxml.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrxml.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrxml.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ng.c -o blast_encoding.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/pattern.c -o pattern.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_program.c -o blast_program.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/split_query.c -o split_query.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/jumper.c -o jumper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilteIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrjson.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrjson.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrjson.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrjson.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrjson.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrjson.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
r_mapper.o
/bin/rm -f libblast.so .libblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o boost_erf.o jumper.o hspfilter_mapper.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblast.so
/bin/ln -f .blast.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blast.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serializable.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serializable.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serialobject.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serialobject.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/pathhook.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/pathhook.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/rpcbase.cpp:33:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/rpcbase_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/rpcbase.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
LD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrxml.cpp -o objistrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objostrjson.cpp -o objostrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/objistrjson.cpp -o objistrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serializable.cpp -o serializable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/serialobject.cpp -o serialobject.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/pathhook.cpp -o pathhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/rpcbase.cpp -o rpcbase.o
/bin/rm -f libxser.so .libxser.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxser.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxser.so
/bin/ln -f .xser.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xser.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool TMPL=datatool -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/namespace.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/statictype.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/datatool.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumtype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumtype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/enumerated.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumtype.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/datatool.cpp -o datatool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/type.cpp -o type.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/namespace.cpp -o namespace.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/statictype.cpp -o statictype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumtype.cpp -o enumtype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/reftype.cpp -o reftype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/reftype.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/ptrstr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/ptrstr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/stdstr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/stdstr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/unitype.cpp -o unitype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/blocktype.cpp -o blocktype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choicetype.cpp -o choicetype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.cpp -o typestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/stdstr.cpp -o stdstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/classstr.cpp -o classstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstaIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumstr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumstr.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choiceptrstr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/value.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/value.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/mcontainer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/mcontainer.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ck-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/enumstr.cpp -o enumstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/stlstr.cpp -o stlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choicestr.cpp -o choicestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/value.cpp -o value.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/module.cpp -o module.o
/usr/bin/g++ -std=gnu++11 -c -WaIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/code.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/code.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/fileutil.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/moduleset.cpp -o moduleset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/generate.cpp -o generate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/filecode.cpp -o filecode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/code.cpp -o code.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/fileutil.cpp -o fileutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.cpp -o alexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/parser.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/parser.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/lexer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/lexer.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/comments.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/aparser.cpp -o aparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/parser.cpp -o parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/lexer.cpp -o lexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.cpp -o exceptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/comments.cpp -o comments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/srcutil.cpp -o srcutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/srcutil.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdaux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdaux.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdlexer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdlexer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdllexer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdllexer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.speIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_pattern_match_callback.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_pattern_match_callback.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_code_generator.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_node.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_merger.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_merger.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/aliasstr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_node.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_spec_file_parser.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp:187:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
i-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f datatool /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh biblio all
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh general all
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh medline all
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh pub all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh seqcode all
/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh blastdb all
/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh genome_collection all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -w -j --jobserver-fds=3,4 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
Platform not defined for Linux armv7l -- please fix me
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh seqset all
/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh scoremat all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh gencoll_client all
Waiting for /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/make_asn.lockPlatform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh seqedit all
/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh seqsplit all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
status=0 ; \
MAKE="/usr/bin/make -w -j --jobserver-fds=3,4"; \
export MAKE; \
for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \
d=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../$x ; \
(cd $d && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh) || status=9 ; \
test -f ${x}__.cpp || \
echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \
test -f ${x}___.cpp || \
echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \
done ; \
exit $status
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqblock'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqblock'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub object/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh submit all
/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh variation all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh blast all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
Platform not defined for Linux armv7l -- please fix me
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
Platform not defined for Linux armv7l -- please fix me
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh id1 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general'
/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
s/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh id2 all
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh taxon1 all
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Warning: (110.8) Found multiple [Taxon1-name] taxid._type settings; using the one from line 18
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh seq all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh blastxml all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv7l -- please fix me
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh blastxml2 all
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset'
Platform not defined for Linux armv7l -- please fix me
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh entrez2 all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat'
.File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
Acquired /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/make_asn.lock for PID 28058 (make_asn)
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh gbseq all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh medlars all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
cd objects/taxon3/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh pubmed all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh mla all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh valid all
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3 && /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/new_module.sh taxon3 all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit'
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null
/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general TMPL=general -w -j --jobserver-fds=3,4 all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast'
/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode TMPL=seqcode -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml TMPL=blastxml -w -j --jobserver-fds=3,4 all
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.16.0
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq'
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml'
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ DATATOOL=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++ -opm /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.16.0
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o
/bin/rm -f libseqcode.so .libseqcode.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqcode.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqcode.so
/bin/ln -f .seqcode.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqcode.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o
/bin/rm -f libblastxml.so .libblastxml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblastxml.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblastxml.so
/bin/ln -f .blastxml.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blastxml.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2 TMPL=entrez2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml2/BlastOutput2_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml2/BlastOutput2.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/BlastOutput2.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml2/BlastOutput2_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastxml2/BlastOutput2.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/BlastOutput2.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/BlastOutput2_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq TMPL=gbseq -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/BlastOutput2_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/gbseq/GBAltSeqData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/gbseq/GBAltSeqData.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/GBAltSeqData.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/gbseq/GBAltSeqData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/gbseq/GBAltSeqData.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/GBAltSeqData.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/GBAltSeqData_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/GBAltSeqData_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o
/bin/rm -f libblastxml2.so .libblastxml2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblastxml2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblastxml2.so
/bin/ln -f .blastxml2.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blastxml2.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o
/bin/rm -f libentrez2.so .libentrez2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libentrez2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libentrez2.so
/bin/ln -f .entrez2.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.entrez2.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2 TMPL=entrez2cli -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o
/bin/rm -f libgbseq.so .libgbseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libgbseq.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libgbseq.so
/bin/ln -f .gbseq.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.gbseq.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general__.cpp -o general__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/general___.cpp -o general___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/general/uoconv.cpp -o uoconv.o
/bin/rm -f libgeneral.so .libgeneral.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxser -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libgeneral.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libgeneral.so
/bin/ln -f .general.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.general.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null
cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio TMPL=biblio -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid TMPL=valid -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule.cpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/misc/sequence_util_macros.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule.cpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o
/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libentrez2cli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libentrez2cli.so
/bin/ln -f .entrez2cli.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.entrez2cli.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid__.cpp:2:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule.cpp: In member function 'ncbi::objects::CComment_rule::TErrorList ncbi::objects::CComment_rule::IsValid(const ncbi::objects::CUser_object&) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule.cpp:290:28: warning: unused variable 'sev' [-Wunused-variable]
CField_rule::TSeverity sev;
^~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/Comment_rule_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/citation_base.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/citation_base.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/citation_base.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid__.cpp -o valid__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/valid/valid___.cpp -o valid___.o
/bin/rm -f libvalid.so .libvalid.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC valid__.o valid___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lgeneral -lxser -lxregexp -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libvalid.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libvalid.so
/bin/ln -f .valid.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.valid.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio__.cpp -o biblio__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/biblio___.cpp -o biblio___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/biblio/citation_base.cpp -o citation_base.o
/bin/rm -f libbiblio.so .libbiblio.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lgeneral -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libbiblio.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libbiblio.so
/bin/ln -f .biblio.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.biblio.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null
cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline TMPL=medline -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars TMPL=medlars -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medlars/Medlars_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medlars/Medlars_entry.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/Medlars_entry.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/Medlars_entry_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medlars/Medlars_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medlars/Medlars_entry.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/Medlars_entry.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/Medlars_entry_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars__.cpp -o medlars__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medlars/medlars___.cpp -o medlars___.o
/bin/rm -f libmedlars.so .libmedlars.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medlars__.o medlars___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libmedlars.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libmedlars.so
/bin/ln -f .medlars.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.medlars.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline__.cpp -o medline__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/medline/medline___.cpp -o medline___.o
/bin/rm -f libmedline.so .libmedline.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medline__.o medline___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libmedline.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libmedline.so
/bin/ln -f .medline.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.medline.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null
cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed TMPL=pubmed -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub TMPL=pub -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/Pubmed_entry_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pubmed/Pubmed_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pubmed/Pubmed_entry.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/Pubmed_entry.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pubmed/Pubmed_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/pubmed/Pubmed_entry.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/Pubmed_entry.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/Pubmed_entry_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o
/bin/rm -f libpubmed.so .libpubmed.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lmedline -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libpubmed.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libpubmed.so
/bin/ln -f .pubmed.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.pubmed.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub__.cpp -o pub__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/pub/pub___.cpp -o pub___.o
/bin/rm -f libpub.so .libpub.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pub__.o pub___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libpub.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libpub.so
/bin/ln -f .pub.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.pub.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla TMPL=mla -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq TMPL=seq -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/Error_val_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/Error_val_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/Error_val.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/Error_val.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/Error_val_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/Error_val.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/Error_val.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/Error_val_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp:1381:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:3:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here
void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc,
^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp:1385:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*std_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp:42:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here
NCBI_DEPRECATED void RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp:1390:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:6: note: declared here
void CSeq_align::RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla__.cpp -o mla__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla___.cpp -o mla___.o
/bin/rm -f libmla.so .libmla.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla__.o mla___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lmedlars -lpub -lpubmed -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libmla.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libmla.so
/bin/ln -f .mla.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.mla.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla TMPL=mlacli -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/mla_client_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/mla_client.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/mla_client_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/mla/mla_client.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::__cxx11::string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:5501:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (idx > 0 && idx < ArraySize(sc_TrnaList)) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client.cpp -o mla_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o
/bin/rm -f libmlacli.so .libmlacli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla_client.o mla_client_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lmla -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libmlacli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libmlacli.so
/bin/ln -f .mlacli.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.mlacli.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq__.cpp -o seq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqalign__.cpp -o seqalign__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqblock__.cpp -o seqblock__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqfeat__.cpp -o seqfeat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqloc__.cpp -o seqloc__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc__.cpp:10:0,
from seqloc__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Seq_id.cpp: In static member function 'static ncbi::SIZE_TYPE ncbi::objects::CSeq_id::ParseIDs(ncbi::objects::CBioseq_Base::TId&, const ncbi::CTempString&, ncbi::objects::CSeq_id::TParseFlags)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Seq_id.cpp:1859:60: warning: 'static std::__cxx11::list<ncbi::CTempString>& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<ncbi::CTempString>&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Split(ss, "|", fasta_pieces, NStr::eNoMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2516:31: note: declared here
static list<CTempString>& Split(
^~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqres__.cpp -o seqres__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqtable__.cpp -o seqtable__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq___.cpp -o seq___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqalign___.cpp -o seqalign___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqblock___.cpp -o seqblock___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqfeat___.cpp -o seqfeat___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbiIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_tree.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_tree.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_tree.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_handle.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqloc___.cpp -o seqloc___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqres___.cpp -o seqres___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include seqtable___.cpp -o seqtable___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/srIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_mapper.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_mapper.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_loc_mapper_base.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( row_n == p_row ) {
~~~~~~^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
c/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_froIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_from_string.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_loc_from_string.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_from_string.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
m_string.cpp -o seq_loc_from_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o
/bin/rm -f libseq.so .libseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseq.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseq.so
/bin/ln -f .seq.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seq.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null
cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null
cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null
cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset TMPL=seqset -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation TMPL=variation -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb TMPL=blastdb -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll TMPL=genome_collection -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/Bioseq_set.cpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/Bioseq_set.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o
/bin/rm -f libblastdb.so .libblastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblastdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblastdb.so
/bin/ln -f .blastdb.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1 TMPL=taxon1 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation__.cpp -o variation__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/variation/variation___.cpp -o variation___.o
/bin/rm -f libvariation.so .libvariation.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC variation__.o variation___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libvariation.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libvariation.so
/bin/ln -f .variation.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.variation.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
cd objects/taxon3/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3 TMPL=taxon3 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/gb_release_file.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/gb_release_file.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset__.cpp -o seqset__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/seqset___.cpp -o seqset___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o
/bin/rm -f libseqset.so .libseqset.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqset.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqset.so
/bin/ln -f .seqset.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqset.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat TMPL=scoremat -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o
/bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libgenome_collection.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libgenome_collection.so
/bin/ln -f .genome_collection.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.genome_collection.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit TMPL=seqedit -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/taxon3__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/taxon3.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o
/bin/rm -f libscoremat.so .libscoremat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libscoremat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libscoremat.so
/bin/ln -f .scoremat.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.scoremat.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/cached_taxon3.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/taxon3__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon3/cached_taxon3.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/cached_taxon3.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrasn.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/cache.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o
/bin/rm -f libseqedit.so .libseqedit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqedit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqedit.so
/bin/ln -f .seqedit.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqedit.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit TMPL=seqsplit -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon3/cached_taxon3.cpp -o cached_taxon3.o
/bin/rm -f libtaxon3.so .libtaxon3.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon3.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon3__.o taxon3___.o taxon3.o cached_taxon3.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libtaxon3.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libtaxon3.so
/bin/ln -f .taxon3.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.taxon3.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit TMPL=submit -w -j --jobserver-fds=3,4 all
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast TMPL=blast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blas_get_searc_resul_reply_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blas_get_searc_resul_reply.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/Blas_get_searc_resul_reply.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blas_get_searc_resul_reply_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blas_get_searc_resul_reply.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/Blas_get_searc_resul_reply.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/cache.cpp -o cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/utils.cpp -o utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o
/bin/rm -f libtaxon1.so .libtaxon1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libtaxon1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libtaxon1.so
/bin/ln -f .taxon1.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.taxon1.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1 TMPL=id1 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/Blas_get_searc_resul_reply_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/Blas_get_searc_resul_reply_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit__.cpp -o submit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/submit/submit___.cpp -o submit___.o
/bin/rm -f libsubmit.so .libsubmit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC submit__.o submit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libsubmit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libsubmit.so
/bin/ln -f .submit.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.submit.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers TMPL=xobjread -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o
/bin/rm -f libseqsplit.so .libseqsplit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqsplit.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqsplit.so
/bin/ln -f .seqsplit.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqsplit.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr TMPL=objmgr -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1__.cpp -o id1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id1/id1___.cpp -o id1___.o
/bin/rm -f libid1.so .libid1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id1__.o id1___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libid1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libid1.so
/bin/ln -f .id1.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2 TMPL=id2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_table_setters.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_setters.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/format_guess_ex.cpp:45:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/acc_pattern.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_table_info.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_read.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_read.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef<ncbi::objects::CBioseq_set> ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:33:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:33:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:123:42: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(line, "\t", fields);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_read.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2__.cpp -o id2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/id2/id2___.cpp -o id2___.o
/bin/rm -f libid2.so .libid2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id2__.o id2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libid2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libid2.so
/bin/ln -f .id2.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_annot_info.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_seq_entry.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_seq_entry.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_seq_entry.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_seq_entry.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_table_info.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast__.cpp -o blast__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blast___.cpp -o blast___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/names.cpp -o names.o
/bin/rm -f libxnetblast.so .libxnetblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast__.o blast___.o names.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxnetblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxnetblast.so
/bin/ln -f .xnetblast.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xnetblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_util.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/snp_annot_info.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/snp_annot_info.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/snp_annot_info.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/table_field.cpp -o table_field.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/read_util.cpp -o read_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_read.cpp -o agp_read.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_util.cpp -o agp_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_validate_reader.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_validate_reader.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_validate_reader.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_loc_cvt.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_loc_cvt.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_name.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/feat_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/feat_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/aln_reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_selector.cpp -o annot_selector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/feat_ci.cpp -o feat_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/graph_ci.cpp -o graph_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object.cpp -o annot_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compilIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_object_index.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_object_index.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/bed_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast TMPL=xnetblastcli -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stltypes.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialimpl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient.cpp -o blastclient.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o
/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastclient.o blastclient_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxnetblastcli.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxnetblastcli.so
/bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xnetblastcli.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_ci.cpp -o annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info.cpp -o tse_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_base_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp: In member function 'virtual bool ncbi::objects::CFastaReader::ParseGapLine(const TStr&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp:1441:35: warning: 'static std::vector<ncbi::CTempString>& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<ncbi::CTempString>&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2685:26: note: declared here
vector<CTempString>& Tokenize( const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_base_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp: In function 'Uint4 TestUtil::EndianIndependentBufferHash(const char*, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:257:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
Uint4 end_value = *((int *) & end_bytes);
^
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o
/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp
ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblast_unit_test_util.a
/bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blast_unit_test_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_aln_builder.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_aln_builder.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_aln_builder.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
FFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/cigar.cpp -o cigar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta.cpp -o fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/getfeature.cpp -o getfeature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmpIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/getfeature.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/featuredump.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/getfeature.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/getfeature.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/track_data.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/track_data.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_data.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp: In member function 'virtual bool ncbi::objects::CGFFReader::x_ParseStructuredComment(const TStr&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:408:55: warning: 'static std::vector<ncbi::CTempString>& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<ncbi::CTempString>&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(line, "# \t", v, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2685:26: note: declared here
vector<CTempString>& Tokenize( const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp: In member function 'virtual ncbi::CRef<ncbi::objects::CGFFReader::SRecord> ncbi::objects::CGFFReader::x_ParseFeatureInterval(const TStr&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:479:55: warning: 'static std::vector<ncbi::CTempString>& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<ncbi::CTempString>&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(line, "\t", v, NStr::eNoMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2685:26: note: declared here
vector<CTempString>& Tokenize( const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:482:58: warning: 'static std::vector<ncbi::CTempString>& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<ncbi::CTempString>&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(line, " \t", v, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2685:26: note: declared here
vector<CTempString>& Tokenize( const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp: In member function 'virtual void ncbi::objects::CGFFReader::x_ParseV3Attributes(ncbi::objects::CGFFReader::SRecord&, const TStrVec&, ncbi::SIZE_TYPE&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:930:53: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(v[i], ";", v2, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:938:45: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(values, ",", vals);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/microarray_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/priority.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/priority.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_info.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/priority.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o
/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp
ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqalign_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqalign_util.a
/bin/ln -f .seqalign_util.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqalign_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=blast_app_util -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/phrap.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/phrap.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/prefetch_impl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_app_util.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/prefetch_impl.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp: In member function 'virtual bool ncbi::objects::CReaderBase::xIsTrackTerminator(const ncbi::CTempString&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp:650:41: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
return (NStr::TruncateSpaces(strLine) == "###");
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2212:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_manager.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/track_data.cpp -o track_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_data.cpp -o reader_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/phrap.cpp -o phrap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/reader_base.cpp -o reader_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/prefetch_manager_impl.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_manager_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_source.cpp -o data_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/priority.cpp -o priority.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blasIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/prefetch_manager.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/prefetch_actions.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o
/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp
ar cr libblast_app_util.a blast_app_util.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblast_app_util.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblast_app_util.a
/bin/ln -f .blast_app_util.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blast_app_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services TMPL=blast_services -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp: In member function 'virtual bool ncbi::objects::CRepeatMaskerReader::ParseRecord(const string&, ncbi::objects::SRepeatRegion&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp:893:43: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
if ( NStr::Split( line, " \t", values ).size() < MIN_VALUE_COUNT ) {
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/prefetch_actions.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp: In function 'ncbi::CRef<ncbi::objects::CSeq_id> ncbi::objects::{anonymous}::GetBestId(const TId&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:146:29: warning: large integer implicitly truncated to unsigned type [-Woverflow]
Uint1 best_weight = UINT_MAX;
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp: In constructor 'ncbi::objects::CFeature_table_reader_imp::CFeature_table_reader_imp(ncbi::ILineReader*, unsigned int, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:438:18: warning: 'ncbi::objects::CFeature_table_reader_imp::m_reader' will be initialized after [-Wreorder]
ILineReader* m_reader;
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:435:18: warning: 'unsigned int ncbi::objects::CFeature_table_reader_imp::m_line_num' [-Wreorder]
unsigned int m_line_num;
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp:789:1: warning: when initialized here [-Wreorder]
CFeature_table_reader_imp::CFeature_table_reader_imp(ILineReader* reader, unsigned int line_num, ILineErrorListener* pMessageListener)
^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/blast_services.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/blast_services.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/wiggle_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o
/bin/rm -f libblast_services.so .libblast_services.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_services.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblast_services.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblast_services.so
/bin/ln -f .blast_services.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blast_services.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/wiggle_reader.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/heap_scope.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/heap_scope.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/heap_scope.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_sofa.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/gff3_sofa.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_sofa.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_info.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_info.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gtf_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/readfeat.cpp -o readfeat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUGIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp: In static member function 'static void ncbi::objects::CGff2Record::TokenizeGFF(std::vector<ncbi::CTempStringEx>&, const ncbi::CTempStringEx&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp:221:68: warning: 'static std::vector<ncbi::CTempStringEx>& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<ncbi::CTempStringEx>&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*, ncbi::CTempString_Storage*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(in_line, "\t", columns, NStr::fSplit_MergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2675:28: note: declared here
vector<CTempStringEx>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/tse_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/tse_handle.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
t+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope.cpp -o scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/heap_scope.cpp -o heap_scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_impl.cpp -o scope_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_info.cpp -o scope_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_handle.cpp -o tse_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map.cpp -o seq_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gvf_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/vcf_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/vcf_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_set_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_annot_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_annot_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/best_feat_finder.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/best_feat_finder.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/Seq_feat_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/Seq_feat.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/best_feat_finder.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/source_mod_parser.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_exception.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta_exception.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_exception.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_set_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_set_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_seq_entry.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/agp_converter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp: In member function 'void ncbi::CAgpConverter::LoadChromosomeMap(ncbi::CNcbiIstream&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp:143:44: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split(line, " \t", split_line);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o
/usr/bin4 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbiIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_annot_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/tse_handle.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_annot_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/struct_cmt_reader.hpp:5,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/struct_cmt_reader.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/struct_cmt_reader.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp: In member function 'void ncbi::objects::CUCSCRegionReader::xSmartFieldSplit(std::vector<std::__cxx11::basic_string<char> >&, ncbi::CTempString)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp:184:62: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(line, " \t.-:", fields, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/message_listener.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/message_listener.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/line_error.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/line_error.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/align_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/align_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/message_listener.cpp -o message_listener.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/readers/line_error.cpp -o line_error.o
/bin/rm -f libxobjread.so .libxobjread.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o message_listener.o line_error.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lcreaders -lxutil -lpub -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxobjread.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxobjread.so
/bin/ln -f .xobjread.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xobjread.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/objmgr_exception.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/align_ci.cpp -o align_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader.cpp -o data_loader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range.cpp -o handle_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/object_manager.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/object_manager.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
src/objmgr/object_manager.cpp -o object_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector.cpp -o seq_vector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_split_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_split_info.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_chunk_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_chunk_info.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_ci.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_type_index.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_type_index.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_type_index.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_loc_mapper.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_loc_mapper.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_selector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_collector.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader_factory.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader_factory.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_collector.cpp: In member function 'bool ncbi::objects::CAnnot_Collector::x_SearchMapped(const ncbi::objects::CSeqMap_CI&, ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_id_Handle&, const ncbi::objects::CHandleRange&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_collector.cpp:3509:72: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if ( m_SearchSegments != numeric_limits<TMaxSearchSegments>::max() &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
x_MaxSearchSegmentsLimitIsReached() ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/mapped_feat.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_feat_handle.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/mapped_feat.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_feat_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_feat_handle.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
d/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_collector.cpp -o annot_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_graph_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Seq_graph_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqres/Seq_graph.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_graph_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_align_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_align_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
otector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_edit_comIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/edit_commands_impl.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_transaction_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/edit_commands_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_edit_commands.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_edit_commands.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_transaction_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/edit_commands_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_impl.hpp:49,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/scope_transaction_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/edit_commands_impl.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edit_saver.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edit_saver.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/unsupp_editsaver.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edit_saver.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/unsupp_editsaver.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edits_db_engine.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edits_db_engine.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mands.cpp -o bioseq_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edit_saver.cpp -o edit_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edits_db_saver.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edit_saver.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/unsupp_editsaver.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/edits_db_saver.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/annot_finder.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_finder.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_finder.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/gc_assembly_parser.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/gc_assembly_parser.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/gc_assembly_parser.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/gc_assembly_parser.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/split_parser.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split_parser.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bio_object_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info_object.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split_parser.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_id_sort.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_id_sort.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/annot_finder.cpp -o annot_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split_parser.cpp -o split_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o
/bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxobjmgr.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxobjmgr.so
/bin/ln -f .xobjmgr.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xobjmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null
cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util TMPL=util -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/dustmask TMPL=xalgodustmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/dustmask/symdust.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/dustmask/symdust.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/weight.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/dustmask/symdust.cpp -o symdust.o
/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC symdust.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxalgodustmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxalgodustmask.so
/bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xalgodustmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/segmask TMPL=xalgosegmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/segmask/segmask.cpp -o segmask.o
/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC segmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxalgosegmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxalgosegmask.so
/bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xalgosegmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split TMPL=id2_split -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_params.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_params.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:47,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:47,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:45:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbalias.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:50:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp: In function 'ncbi::objects::feature::ELocationInFrame ncbi::objects::feature::IsLocationInFrame(const ncbi::objects::CSeq_feat_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp:3357:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/feature.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqsplit/ID2S_Chunk_Id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/split_blob.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/blob_splitter_impl.hpp:47,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader_snp.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'std::__cxx11::string ncbi::s_SeqDB_TryPaths(const string&, const string&, char, bool, ncbi::CSeqDB_FileExistence&, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:356:79: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(blast_paths, s_GetPathSplitter(), roads, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const string&, std::vector<int>&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:794:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (((endp - beginp) < 2U)
~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryGiList(const char*, const char*, std::vector<ncbi::CSeqDBGiList::SGiOid>&, bool*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:871:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (((bendp - bbeginp) < 2U)
~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/seqref.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/blob_id.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/blob_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/seqref.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-semake[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/split_blob.cpp -o split_blob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/blob_id.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/blob_id.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/blob_id.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/id_range.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/id_range.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp: In function 'const string* ncbi::s_CheckUniqueValues(const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:2050:37: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(v, ":", items);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp: In member function 'void ncbi::CSeqDB_IdRemapper::AddMapping(int, int, const string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:2084:36: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(desc, ":", items);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp: In function 'void ncbi::s_GetDetails(const string&, std::__cxx11::string&, std::__cxx11::string&, std::__cxx11::string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:2260:36: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(desc, ":", items);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/MolInfo_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/MolInfo.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/object_splitinfo.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/object_splitinfo.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetFlags(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:804:45: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split( clause, ";", kywds );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In function 'bool x_EndsWithStrain(const ncbi::CTempString&, const ncbi::CTempString&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:1068:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In function 'std::__cxx11::string s_RemoveBracketedOrgFromEnd(std::__cxx11::string, std::__cxx11::string)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:1709:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:5501:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:1787:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In function 'size_t s_TitleEndsInOrganism(std::__cxx11::string&, ncbi::CTempString)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:2400:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:2401:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (pos == idx + 2) {
~~~~^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_AdjustProteinTitleSuffix(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:2471:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp: In member function 'std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp:2656:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/asn_sizer.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/asn_sizer.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/annot_piece.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/id_range.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/annot_piece.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/obj_sniff.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/chunk_info.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/place_id.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/chunk_info.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/weight.cpp -o weight.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/sequence.cpp -o sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/feature.cpp -o feature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/create_defline.cpp -o create_defline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/reader_id1_base.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:56,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/size.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/size.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/split/asn_sizer.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/size.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/reader_id2_base.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/id_range.cpp -o id_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/size.cpp -o size.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o
/bin/rm -f libid2_split.so .libid2_split.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libid2_split.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libid2_split.so
/bin/ln -f .id2_split.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.id2_split.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:34:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdboidlist.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<long long int>&, ncbi::CSeqDBLockHold&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:938:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable]
int found_short(-1);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ild/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSETIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_service.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/inclIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/reader_id2_base.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_service.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ude /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o
/bin/rm -f libseqdb.so .libseqdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqdb.so
/bin/ln -f .seqdb.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
curity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/incr_time.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/incr_time.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp:1804:81: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp:1732:57: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
blast+-2.6.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o
/bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp
ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader.a
/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lxconnect -lconnect -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader.so
/bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader-static.dep
/bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
E=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objmgr/util/objutil.cpp -o objutil.o
/bin/rm -f libxobjutil.so .libxobjutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC weight.o sequence.o feature.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxobjutil.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxobjutil.so
/bin/ln -f .xobjutil.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xobjutil.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/services/blast_services.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/services/blast_services.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xloader_blastdb.so
/bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xloader_blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_services_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_services_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blast_services_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blast_services_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In constructor 'ncbi::CWriteDB_File::CWriteDB_File(const string&, const string&, int, Uint8, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:115:64: warning: integer overflow in expression [-Woverflow]
static const Uint8 MAX_FILE_SIZE = (1L << MAX_OFFSET_BITS) - 1L;
~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:115:24: warning: unused variable 'MAX_FILE_SIZE' [-Wunused-variable]
static const Uint8 MAX_FILE_SIZE = (1L << MAX_OFFSET_BITS) - 1L;
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In member function 'int ncbi::CWriteDB_File::Write(const ncbi::CTempString&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:147:61: warning: integer overflow in expression [-Woverflow]
static const Uint8 MAX_OFFSET = (1L << MAX_OFFSET_BITS) - 1L;
~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:147:24: warning: unused variable 'MAX_OFFSET' [-Wunused-variable]
static const Uint8 MAX_OFFSET = (1L << MAX_OFFSET_BITS) - 1L;
^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_isam.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable]
unsigned long tmp;
^~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/writer.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:288:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o
/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp
ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_cache.a
/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lxconnect -lconnect -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_cache.so
/bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_cache-static.dep
/bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_cache.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/dbindex.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_search.cpp:47:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/reader_id1_base.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/id1/reader_id1.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o
/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libseqmasks_io.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libseqmasks_io.so
/bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.seqmasks_io.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/reader.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/reader_id2_base.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/id2/reader_id2.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/writedb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o
/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxalgoblastdbindex.so
/bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xalgoblastdbindex.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr TMPL=alnmgr -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o
/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp
ar cr libncbi_xreader_id1.a reader_id1.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_id1.a
/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id1.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lxconnect -lconnect -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_id1.so
/bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_id1-static.dep
/bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_builders.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_seqid.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/pairwise_aln.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_builders.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o
/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp
ar cr libncbi_xreader_id2.a reader_id2.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_id2.a
/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id2.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lxconnect -lconnect -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xreader_id2.so
/bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_id2-static.dep
/bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xreader_id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp: At global scope:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:128:43: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config /* = CSeqFormatterConfig() */)
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config)
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/build_db.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so
/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_seqid.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/seqloc__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_generators.cpp: In function 'void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef 'TAlnRngColl' locally defined but not used [-Wunused-local-typedefs]
typedef CAlignRangeCollection<TAlnRng> TAlnRngColl;
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_seqid.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/pairwise_aln.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:57,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/criteria.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:59,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/criteria.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
IC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o
/bin/rm -f libwritedb.so .libwritedb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libwritedb.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libwritedb.so
/bin/ln -f .writedb.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.writedb.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup TMPL=cleanup -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/align_range.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alndiag.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alndiag.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_align> ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector<int>&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmap.cpp:1467:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (TNumrow row = 0; row < selected_rows.size(); row++) {
~~~~^~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o
/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblastdb_format.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblastdb_format.so
/bin/ln -f .blastdb_format.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blastdb_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixMatch>&, const ncbi::CRef<ncbi::objects::CAlnMixMatch>&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
match1->m_ChainScore == match2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
match1->m_Score > match2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
(aln_seq1->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand1 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore < 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 != eNa_strand_minus)) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:49:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (start_its_i->second->first != -1) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o makembindex
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f makembindex /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/makembindex
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp:151:17: warning: 'width2' may be used uninitialized in this function [-Wmaybe-uninitialized]
int width1, width2;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmix.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::s_TitleEndsInOrganism(const string&, const string&, ncbi::SIZE_TYPE*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:2006:73: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
answer = NStr::FindNoCase(sTitle, sPattern, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp: In function 'void ncbi::objects::s_RemoveOrgFromEndOfProtein(ncbi::objects::CBioseq&, std::__cxx11::string)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:2060:73: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:5501:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In function 'void s_TestPartialAmbigRange(ncbi::CSeqDB&, int, int, int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:79:18: warning: variable 'wholeL' set but not used [-Wunused-but-set-variable]
int wholeL(0);
^~~~~~
S=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/nc/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4448:45: warning: integer overflow in expression [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (plus && prev_start_plus_len < start ||
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp:37:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixSeq>&, const ncbi::CRef<ncbi::objects::CAlnMixSeq>&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_ChainScore == seq2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_Score > seq2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup_utils.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup_utils.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/misc/sequence_util_macros.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/biblio_macros.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/misc/sequence_macros.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp:41:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec_iterator.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_explorer.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnvec_iterator.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec_iterator.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_SeqFeatTRNABC(ncbi::objects::CSeq_feat&, ncbi::objects::CTrna_ext&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp:5893:19: warning: unused variable 'comment' [-Wunused-variable]
const string &comment = ( FIELD_IS_SET(feat, Comment) ? GET_FIELD(feat, Comment) : kEmptyStr );
^~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::__cxx11::string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp:7004:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) {
~~~~~~~~~~^~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp:7018:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if( first_pos > last_pos ) {
~~~~~~~~~~^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp: At global scope:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:128:43: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout),
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:101:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:119:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
#define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get()
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:101:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:120:19: note: in expansion of macro 'NcbiEmptyString'
#define kEmptyStr NcbiEmptyString
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr'
BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout),
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config),
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:101:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(*itr, db, std::cout, config);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f("%m", db, std::cout, config);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_inst.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/aln_seqid.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/pairwise_aln.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_aln.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
bi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbimake[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o blastdb_format_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdb_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_aln.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o seqdb_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seqdb_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seqdb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o gene_info_reader
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f gene_info_reader /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/gene_info_reader
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/general__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alntext.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/score_builder_base.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_demo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_demo
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seqdb_demo /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seqdb_demo
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j --jobserver-fds=3,4 all
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-blast+-2.6.0/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o
/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxalnmgr.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxalnmgr.so
/bin/ln -f .xalnmgr.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xalnmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_perf.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_perf
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seqdb_perf /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seqdb_perf
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask TMPL=xalgowinmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2814:45: warning: integer overflow in expression [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o
/bin/rm -f libxcleanup.so .libxcleanup.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjutil -lvalid -lsubmit -ltaxon3 -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxcleanup.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxcleanup.so
/bin/ln -f .xcleanup.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xcleanup.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blastdb/Blast_def_line.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:59,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbloader.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/gbloader.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbloader.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format TMPL=xformat -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_util.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/accession_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/basecount_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/basecount_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/impl/gbload_util.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/genbank/gbloader.hpp:48,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o
/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp
ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xloader_genbank.a
/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbloader.o gbload_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lxconnect -lconnect -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libncbi_xloader_genbank.so
/bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xloader_genbank-static.dep
/bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.ncbi_xloader_genbank.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window_pattern.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window_pattern.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window_pattern_ambig.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/Seq_feat_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/Seq_feat.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/comment_item.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_factory.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/incluIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/contig_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o writedb_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f writedb_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/writedb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Delta_ext_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Delta_ext.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/contig_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/date_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/date_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/dbsource_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/accession_item.cpp -o accession_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/comment_item.cpp -o comment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/contig_item.cpp -o contig_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/date_item.cpp -o date_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_uset_simple.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_simple.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_factory.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_factory.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_factory.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/defline_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_uset_array.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_array.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format TMPL=align_format -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/format_flags.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/format_flags.cpp:30:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:45:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_bin.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/simple TMPL=xobjsimple -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_bin.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_bin.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/align_format_util.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/align_format_util.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/align_format_util.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp: In function 'void ncbi::objects::s_SplitCommaSeparatedStringInParens(std::vector<std::__cxx11::basic_string<char> >&, const string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:874:120: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize( string_to_split.substr( 1, string_to_split.length() - amount_to_chop_off_end - 1), ",", output_vec );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp: In member function 'void ncbi::objects::CFeatureItem::x_AddQualExceptions(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:1393:49: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split( raw_exception, ",", exceptions );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:1790:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( idx > 0 && idx < ArraySize(s_TrnaList) ) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp: In function 'void ncbi::objects::s_ParseParentQual(const ncbi::objects::CGb_qual&, std::__cxx11::list<std::__cxx11::basic_string<char> >&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:3355:37: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split(val, "(,)", vals);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp: In member function 'void ncbi::objects::CFeatureItem::x_AddRptUnitQual(const string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:3787:39: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(tmp, ",", units);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:38:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/simple/simple_om.cpp -o simple_om.o
/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC simple_om.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxobjsimple.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxobjsimple.so
/bin/ln -f .xobjsimple.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xobjsimple.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker TMPL=dustmasker -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
de /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_uset_hash.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_hash.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:113:60: warning: 'unit_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
if( k == 0U || k > (Uint4)(2*unit_size - 1) )
~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o dustmasker
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f dustmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/dustmasker
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showdefline.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showdefline.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_item.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_cache_boost.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_cache_boost.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ctrl_items.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/align_format_util.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_counts_converter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/win_mask_counts_converter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_counts_converter.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/PIR_block_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/PIR_block.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp:4433:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp:4433:81: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/locus_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp: In member function 'void ncbi::objects::CKeywordsItem::x_AddKeyword(const string&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp:378:38: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split( keyword, ";", kywds );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/defline_item.cpp -o defline_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/feature_item.cpp -o feature_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_item.cpp -o genome_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/locus_item.cpp -o locus_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp -o primary_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (this_start < (15 + last_stop) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp: In static member function 'static void ncbi::objects::CReferenceItem::ChangeMedlineAuthorsToISO(ncbi::CRef<ncbi::objects::CPub>)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp:1300:72: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(author_name, " ", tokens, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/segment_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/segment_item.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sequence_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/GB_block_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqblock/GB_block.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/source_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp:37:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:288:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/version_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/source_item.cpp:257:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( genome >= s_organelle_prefix_size ) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/version_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/win_mask_config.hpp:41:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/reference_item.cpp -o reference_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/segment_item.cpp -o segment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/source_item.cpp -o source_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/version_item.cpp -o version_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-bIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/wgs_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/wgs_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/win_mask_config.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/tsa_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/tsa_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(type == eAny || type >= eGenerateMasksWithDuster)
^~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
arg_desc.AddDefaultKey( "dust_level", "dust_level",
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/vectorscreen.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/vectorscreen.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/vectorscreen.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/vectorscreen.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_window.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/winmask/seq_masker_istat.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/showalign.cpp -o showalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/tabular.cpp -o tabular.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/seqalignfilter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/seqalignfilter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Dbtag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/qualifiers.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o
/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxalgowinmask.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxalgowinmask.so
/bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xalgowinmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api TMPL=xblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/context.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o
/bin/rm -f libalign_format.so .libalign_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libalign_format.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libalign_format.so
/bin/ln -f .align_format.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.align_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker TMPL=winmasker -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_app.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/main.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function 'bool ncbi::blast::CBlastOptionsLocal::Validate() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp:379:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp:388:9: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return true;
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/dustmask/symdust.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/dustmask/symdust.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_IdComments(ncbi::objects::CBioseqContext&, ncbi::objects::CFlatGatherer::EGenomeAnnotComment) const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp:1018:34: warning: unused variable 'format' [-Wunused-variable]
CCommentItem::ECommentFormat format = ctx.Config().DoHTML() ?
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_setup_cxx.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp: At global scope:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp:748:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function]
static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx)
^~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o windowmasker
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f windowmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/windowmasker
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/item_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_gather.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqalign.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/Object_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_gather.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqalign.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
last+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/context.cpp -o context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_items.cpp -o gather_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp: In member function 'void ncbi::objects::CFlatFileGenerator::Generate(const ncbi::objects::CSeq_entry_Handle&, ncbi::objects::CFlatItemOStream&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:185:10: warning: unused variable 'nearFeatsSuppress' [-Wunused-variable]
bool nearFeatsSuppress = false;
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:188:10: warning: variable 'isNgNtNwNz' set but not used [-Wunused-but-set-variable]
bool isNgNtNwNz = false;
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:189:10: warning: variable 'isGED' set but not used [-Wunused-but-set-variable]
bool isGED = false;
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp:190:10: warning: variable 'isTPA' set but not used [-Wunused-but-set-variable]
bool isTPA = false;
^~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Cit_book_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/biblio/Cit_book.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blasIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_formatter.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_formatter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:99:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:105:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/format_item_ostream.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/item_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/format_item_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/format_item_ostream.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CGapItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::COriginItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CContigItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CPrimaryItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CTSAItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CWGSItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CDBSourceItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CSequenceItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CBaseCountItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CFeatureItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CSourceFeatureItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CFeatHeaderItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CCommentItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CReferenceItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CSourceItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CSegmentItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CKeywordsItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CHtmlAnchorItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CGenomeProjectItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CVersionItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CAccessionItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CDeflineItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CLocusItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp: In instantiation of 'ncbi::objects::{anonymous}::CWrapperForFlatTextOStream<TFlatItemClass>::~CWrapperForFlatTextOStream() [with TFlatItemClass = ncbi::objects::CEndSectionItem]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:2342:1: required from here
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: warning: throw will always call terminate() [-Wterminate]
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:530:25: note: in C++11 destructors default to noexcept
throw (exception_var)
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiexpt.hpp:549:9: note: in expansion of macro 'NCBI_EXCEPTION_THROW'
NCBI_EXCEPTION_THROW(NCBI_EXCEPTION(exception_class, err_code, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp:120:17: note: in expansion of macro 'NCBI_THROW'
NCBI_THROW(CFlatException, eHaltRequested,
^~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_ostream.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_ostream.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
GEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ostream_text_ostream.cpp -o ostreamIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ostream_text_ostream.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/ostream_text_ostream.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ostream_text_ostream.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/origin_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/origin_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/item_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_gather.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_formatter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
t+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item_base.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/accession_item.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp: In function 'ncbi::objects::CFlatFileConfig::TGenbankBlocks ncbi::objects::{anonymous}::x_GetGenbankBlocks(const ncbi::CArgs&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp:841:52: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(blocks_arg, ",", vecOfBlockNames);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp: In function 'void ncbi::objects::s_GBSeqStringCleanup(std::__cxx11::string&, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:82:36: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split(str, " \n\r\t\b", l);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp: In member function 'virtual void ncbi::objects::CGBSeqFormatter::FormatGenomeProject(const ncbi::objects::CGenomeProjectItem&, ncbi::objects::IFlatTextOStream&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:358:37: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split(second, ",", ids);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp: In member function 'void ncbi::objects::CGBSeqFormatter::x_StrOStreamToTextOStream(ncbi::objects::IFlatTextOStream&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:685:70: warning: 'static std::__cxx11::list<std::__cxx11::basic_string<char> >& ncbi::NStr::Split(ncbi::CTempString, ncbi::CTempString, std::__cxx11::list<std::__cxx11::basic_string<char> >&)' is deprecated [-Wdeprecated-declarations]
NStr::Split((string)CNcbiOstrstreamToString(m_StrStream), "\n", l);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2484:26: note: declared here
static list<string>& Split(const CTempString str,
^~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o align_format_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f align_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/align_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
_text_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/origin_item.cpp -o origin_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/alignment_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/text_ostream.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/alignment_item.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gap_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item_base.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/gap_item.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gap_item.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_project_item.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_project_item.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/inclIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_blast.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_blast.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqset/Bioseq_set.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_set_handle.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_entry_ci.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/gather_iter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_blast.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_blast.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item_base.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/html_anchor_item.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/html_anchor_item.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/item_base.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/html_anchor_item.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/html_anchor_item.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/inst_info_map.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/inst_info_map.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gap_item.cpp -o gap_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/OrgMod_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqfeat/OrgMod.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/items/flat_qual_slots.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_seqinfosrc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ude /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o
/bin/rm -f libxformat.so .libxformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxformat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxformat.so
/bin/ln -f .xformat.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_mtlock.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psibl2seq.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psibl2seq.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_iteration.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_iteration.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_impl.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psi_pssm_input.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psi_pssm_input.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psi_pssm_input.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psi_pssm_input.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o
/usIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/msa_pssm_input.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/msa_pssm_input.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_aux_priv.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/msa_pssm_input.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/msa_pssm_input.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux_priv.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux_priv.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (k < m_Msa->dimensions->query_length &&
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/version.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULEIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rps_aux.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/search_strategy.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rps_aux.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/search_strategy.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/prelim_stage.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/prelim_stage.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/traceback_stage.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/traceback_stage.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/uniform_search.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/uniform_search.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_search.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_search.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/local_search.cpp -o local_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c+In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_results.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_search.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/query_data.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_search.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_results.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/query_data.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/effsearchspace_calc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
+/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/query_data.cpp -o query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_dbindex.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_dbindex.cpp:43:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_blk.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_blk.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/effsearchspace_calc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_aux_priv.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_blk.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ap=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpsblast_local.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seedtop.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp: In member function 'void ncbi::blast::CSeedTop::x_ParsePattern()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp:66:56: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::TSplitFlags, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(NStr::ToUpper(m_Pattern), "-", units);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2658:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/cdd_pssm_input.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c+In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/magicblast_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/magicblast_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/magicblast_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/magicblast_options.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/deltablast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/magicblast.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/magicblast.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
+/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o
/bin/rm -f libxblast.so .libxblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgowinmask -lxalgodustmask -lseqmasks_io -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxnetblastcli -lxnetblast -lscoremat -lxconnect -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxblast.so
/bin/ln -f .xblast.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format TMPL=xblastformat -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput TMPL=blastinput -w -j --jobserver-fds=3,4 all
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast TMPL=igblast -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blastfmtutil.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastfmtutil.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blastfmtutil.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastfmtutil.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp: In constructor 'ncbi::blast::CIgAnnotationInfo::CIgAnnotationInfo(ncbi::CConstRef<ncbi::blast::CIgBlastOptions>&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:92:65: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(*l, " \t\n\r", tokens, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:116:65: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(*l, " \t\n\r", tokens, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp: In member function 'void ncbi::blast::CIgBlast::x_ScreenByAlignLength(ncbi::CRef<ncbi::blast::CSearchResultSet>&, int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp:138:73: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if((*it)->GetAlignLength() - (*it)->GetTotalGapCount(0) < length){
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f aalookup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/aalookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o
/bin/rm -f libigblast.so .libigblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC igblast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libigblast.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libigblast.so
/bin/ln -f .igblast.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.igblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list<ncbi::CRef<ncbi::objects::CHit> >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false));
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/tempstr.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimisc.hpp:1216:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::__cxx11::string&, std::__cxx11::string&, bool, bool)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false));
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/tempstr.hpp:39:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimisc.hpp:1216:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml2_format.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_scope_src.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_scope_src.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_scope_src.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_scope_src.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aascan_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f aascan_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/aascan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xmlformat.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xmlformat.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:49:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:51:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef<ncbi::objects::CSeq_align_set>, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp:520:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if(count >= m_NumSummary)
~~~~~~^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xmlformat.cpp:37:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xmlformat.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_args.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastdiag_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdiag_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdiag_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xml2format.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xml2format.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-m/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:441:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
options->SetFilterString("L"); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xml2format.cpp:36:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/data4xml2format.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/build_archive.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/build_archive.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastengine_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastengine_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/sam_formatter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/sam.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/sam.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/format/sam_formatter.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/format/sam.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/sam.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/cmdline_flags.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/cmdline_flags.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbiIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastp_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastp_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
ap=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/format/sam.cpp -o sam.o
/bin/rm -f libxblastformat.so .libxblastformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxformat -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libxblastformat.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libxblastformat.so
/bin/ln -f .xblastformat.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.xblastformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastextend_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastextend_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rmblastn_args.cpp:20:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rmblastn_args.cpp:20:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastx_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastx_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastx_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastx_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -WIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/psiblast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/psiblast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpsblast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpsblast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastn_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastp_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastp_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/deltablast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/deltablast_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
date-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blasIn file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/kblastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/kblastp_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_args.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/kblastp_args.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/kblastp_args.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastfilter_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastfilter_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/kblastp_args.cpp: In constructor 'ncbi::blast::CKBlastpAppArgs::CKBlastpAppArgs()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/kblastp_args.cpp:50:16: warning: unused variable 'kFilterByDefault' [-Wunused-variable]
bool const kFilterByDefault = false;
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:0:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:71:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:145:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1327:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1331:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1336:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1338:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1342:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1344:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1348:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1350:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1354:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1356:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:175:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /usr/include/boost/test/test_tools.hpp:45:0,
from /usr/include/boost/test/unit_test.hpp:18,
from /usr/include/boost/test/auto_unit_test.hpp:16,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:66,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1395:57: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:173:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blasthits_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blasthits_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxncbi -ldl -lm -lpthread -o gapinfo_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f gapinfo_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/gapinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j --jobserver-fds=3,4 all
t+-2.6.0/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o
/bin/rm -f libblastinput.so .libblastinput.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib
/bin/ln -f libblastinput.so /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib/libblastinput.so
/bin/ln -f .blastinput.dep /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/status/.blastinput.dep
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_besthit_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/hspfilter_besthit_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastoptions_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastoptions_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o gencode_singleton_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/gencode_singleton_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:42:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_culling_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/hspfilter_culling_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspstream_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f hspstream_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/hspstream_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastsetup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastsetup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f linkhsp_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/linkhsp_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie magicblast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f magicblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/magicblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o msa2pssm_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/msa2pssm_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f ntlookup_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/ntlookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o phiblast_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f phiblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/phiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f ntscan_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/ntscan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o optionshandle_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f optionshandle_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/optionshandle_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_iteration_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/psiblast_iteration_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/prelimsearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/psibl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/pssmenginefreqratios_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f psiblast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/psiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie querydata_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f querydata_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/querydata_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_interval.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/services/blast_services.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f queryinfo_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/queryinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Std_seg_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Std_seg.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f redoalignment_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/redoalignment_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/util/sequence.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rps_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f rps_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/rps_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/pssmcreate_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/search_strategy.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_seqinfosrc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seqinfosrc_seqvec.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f scoreblk_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/scoreblk_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f remote_blast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/remote_blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seqinfosrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f setupfactory_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/setupfactory_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f search_strategy_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/search_strategy_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie stat_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o stat_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f stat_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/stat_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/subj_ranges_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie split_query_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f split_query_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/split_query_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie traceback_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f traceback_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/traceback_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/tracebacksearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o version_reference_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f version_reference_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/version_reference_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seqsrc_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seqsrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f uniform_search_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/uniform_search_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=blast_formatter -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=blastn -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/iterator.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_formatter.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastn_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include -I../ /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f bdbloader_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/bdbloader_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=blastp -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastp_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastn_app.cpp -o blastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastn
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastn
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=blastx -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blast_formatter
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blast_formatter /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blast_formatter
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=deltablast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastx_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/deltablast.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/deltablast_app.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastp_app.cpp -o blastp_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastp_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastp
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastp /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastp
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=psiblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/psiblast_app.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/blastx_app.cpp -o blastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastx
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastx /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastx
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=rpsblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpsblast_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie deltablast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o deltablast
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f deltablast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/deltablast
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=rpstblastn -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o blast_format_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blast_format_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blast_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=seedtop -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpstblastn_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o psiblast
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f psiblast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/psiblast
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=tblastn -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/seedtop.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/seedtop_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastn_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpsblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o rpsblast
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f rpsblast /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/rpsblast
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast TMPL=tblastx -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_aux.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastx_app.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpstblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o rpstblastn
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f rpstblastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/rpstblastn
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdb_aliastool.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seedtop_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o seedtop
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f seedtop /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/seedtop
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=blastdbcheck -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o tblastn
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f tblastn /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/tblastn
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=blastdbcmd -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcmd.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp: In member function 'int CAliasTest::DoTest(const string&, TSeen&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:720:72: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(*line, " \t\n\r", tokens, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp: In member function 'virtual bool CDbTest::Test(CTestActionList&)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:941:54: warning: 'static std::vector<std::__cxx11::basic_string<char> >& ncbi::NStr::Tokenize(ncbi::CTempString, ncbi::CTempString, std::vector<std::__cxx11::basic_string<char> >&, ncbi::NStr::EMergeDelims, std::vector<unsigned int>*)' is deprecated [-Wdeprecated-declarations]
NStr::Tokenize(m_Db, " ", dbs, NStr::eMergeDelims);
^
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:2666:28: note: declared here
static vector<string>& Tokenize(const CTempString str,
^~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o tblastx
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f tblastx /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/tblastx
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=blastdbcp -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastdb_aliastool
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdb_aliastool /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdb_aliastool
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=convert2blastmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcp.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/build_db.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcp.cpp:33:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/readers/fasta.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/convert2blastmask.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcheck.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastdbcheck
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdbcheck /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdbcheck
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=makeblastdb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/scope.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/sseqloc.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeblastdb.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcmd.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastdbcmd
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdbcmd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdbcmd
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb TMPL=makeprofiledb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeprofiledb.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o blastdbcp
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastdbcp /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastdbcp
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/segmasker TMPL=segmasker -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistrasn.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeprofiledb.cpp:40:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie convert2blastmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o convert2blastmask
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f convert2blastmask /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/convert2blastmask
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/build_db.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/segmasker/segmasker.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/blast/seqdb_writer/build_db.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeblastdb.cpp: In member function 'void CMakeBlastDBApp::x_BuildDatabase()':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeblastdb.cpp:1126:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (bytes >= (1L << 31)) {
~~~~~~^~~~~~~~~~~~~
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/segmasker/segmasker.cpp -o segmasker.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie segmasker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -ldl -lm -lpthread -o segmasker
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f segmasker /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/segmasker
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/bioseq_handle.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeprofiledb.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o makeprofiledb
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f makeprofiledb /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/makeprofiledb
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seqalign/Seq_align_set.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/blast_types.hpp:38,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:36:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -ldl -lm -lpthread -o makeblastdb
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f makeblastdb /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/makeblastdb
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:38:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blast_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4550:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/corelib/ncbistr.hpp:4577:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bm.h:68:0,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/annot_type_selector.hpp:37,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objmgr/data_loader.hpp:40,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:39,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/algo/blast/blastinput/blast_scope_src.hpp:43,
from /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:37:
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h: In function 'unsigned int bm::gap_test(const T*, unsigned int)':
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:521:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include/util/bitset/bmfunc.h:530:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'else'
return ((*buf) & 1) ^ ((--start) & 1);
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie delta_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f delta_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/delta_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f bl2seq_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/bl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/inc -I/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/include /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -L/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lblast -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lz -lp11-kit -lgmp -lhogweed -lgmp -lnettle -ltasn1 -lidn -lp11-kit -lz -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test
/bin/bash /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin
/bin/ln -f blastinput_unit_test /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/bin/blastinput_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
dh_auto_test
/usr/bin/make -j1 check VERBOSE=1
make[2]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++'
if test -s ""; then \
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build && /usr/bin/make -w check_p RUN_CHECK=Y; \
else \
cd /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build && /usr/bin/make -w check_r RUN_CHECK=Y; \
fi
make[3]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
======================================================================
make[4]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
/usr/bin/make -C corelib -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/corelib'
/usr/bin/make -C util -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
/usr/bin/make -C regexp -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/regexp TMPL=regexp -w mark-as-disabled
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/regexp'
/usr/bin/make -C xregexp -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/xregexp'
/usr/bin/make -C compress -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress'
/usr/bin/make -C bzip2 -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
NOTE: Skipping project bzip2 due to unmet requirements:
LocalBZ2
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/bzip2 TMPL=bzip2 -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
make[9]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -C zlib -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
NOTE: Skipping project zlib due to unmet requirements:
LocalZ
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/util/compress/zlib TMPL=zlib -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
make[9]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress/api'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/compress'
/bin/echo 'Warning: non-existent sub-project "diff"'
Warning: non-existent sub-project "diff"
/bin/echo 'Warning: non-existent sub-project "image"'
Warning: non-existent sub-project "image"
/usr/bin/make -C tables -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/tables'
/usr/bin/make -C creaders -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/creaders'
/usr/bin/make -C sequtil -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/sequtil'
/usr/bin/make -C bitset -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "qparse"'
Warning: non-existent sub-project "qparse"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/util'
/usr/bin/make -C connect -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/usr/bin/make -C services -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "ext"'
Warning: non-existent sub-project "ext"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "daemons"'
Warning: non-existent sub-project "daemons"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/connect'
/usr/bin/make -C cgi -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/cgi'
/usr/bin/make -C html -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/html'
/usr/bin/make -C build-system -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system'
/usr/bin/make -C helpers -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
SKIP -- build-system/helpers/run_with_lock
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/helpers'
/usr/bin/make -C project_tree_builder -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
SKIP -- build-system/project_tree_builder/project_tree_builder
/usr/bin/make -C msbuild -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
NOTE: Skipping project msbuild due to unmet requirements:
MSWin
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[9]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system/project_tree_builder'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/build-system'
/usr/bin/make -C serial -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
/usr/bin/make -C datatool -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
TEST -- serial/datatool/datatool
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial/datatool'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "soap"'
Warning: non-existent sub-project "soap"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/serial'
/bin/echo 'Warning: non-existent sub-project "db"'
Warning: non-existent sub-project "db"
/bin/echo 'Warning: non-existent sub-project "dbapi"'
Warning: non-existent sub-project "dbapi"
/usr/bin/make -C objects -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects'
/usr/bin/make -C general -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/general'
/usr/bin/make -C biblio -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biblio'
/usr/bin/make -C medline -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medline'
/usr/bin/make -C pub -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pub'
/usr/bin/make -C seqcode -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqcode'
/usr/bin/make -C seq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seq'
/usr/bin/make -C seqset -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqset'
/usr/bin/make -C submit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/submit'
/usr/bin/make -C seqedit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqedit'
/usr/bin/make -C seqsplit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id1'
/usr/bin/make -C id2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/id2'
/usr/bin/make -C entrez2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrez2'
/usr/bin/make -C pubmed -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pubmed'
/usr/bin/make -C medlars -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/medlars'
/usr/bin/make -C mla -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mla'
/usr/bin/make -C proj -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/proj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/proj'
/usr/bin/make -C scoremat -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/scoremat'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blast'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastdb'
/usr/bin/make -C blastxml -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml'
/usr/bin/make -C blastxml2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -C mmdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mmdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mmdb'
/usr/bin/make -C cn3d -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/cn3d'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/cn3d'
/usr/bin/make -C cdd -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/cdd'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/cdd'
/usr/bin/make -C ncbimime -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/ncbimime'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/ncbimime'
/usr/bin/make -C pcsubstance -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pcsubstance'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pcsubstance'
/usr/bin/make -C pcassay -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pcassay'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/pcassay'
/usr/bin/make -C gbseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbseq'
/usr/bin/make -C insdseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/insdseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/insdseq'
/usr/bin/make -C tinyseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/tinyseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/tinyseq'
/usr/bin/make -C biotree -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biotree'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/biotree'
/usr/bin/make -C entrezgene -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrezgene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/entrezgene'
/usr/bin/make -C omssa -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/omssa'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/omssa'
/usr/bin/make -C remap -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/remap'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/remap'
/usr/bin/make -C seqtest -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqtest'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/seqtest'
/usr/bin/make -C taxon1 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon1'
/usr/bin/make -C taxon3 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/taxon3'
/usr/bin/make -C gbproj -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbproj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/gbproj'
/usr/bin/make -C trackmgr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/trackmgr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/trackmgr'
/usr/bin/make -C valerr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valerr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valerr'
/usr/bin/make -C valid -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/valid'
/usr/bin/make -C access -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/access'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/access'
/usr/bin/make -C docsum -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/docsum'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/docsum'
/usr/bin/make -C featdef -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/featdef'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/featdef'
/usr/bin/make -C genomecoll -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C homologene -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/homologene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/homologene'
/usr/bin/make -C mim -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mim'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/mim'
/usr/bin/make -C objprt -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/objprt'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/objprt'
/usr/bin/make -C variation -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/variation'
/usr/bin/make -C macro -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/macro'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/macro'
/usr/bin/make -C genesbyloc -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genesbyloc'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/genesbyloc'
/usr/bin/make -C coords -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/coords'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/coords'
/usr/bin/make -C varrep -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/varrep'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects/varrep'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objects'
/usr/bin/make -C objmgr -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/usr/bin/make -C util -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/util'
/usr/bin/make -C split -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr/split'
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objmgr'
/usr/bin/make -C objtools -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "unit_test_util"'
Warning: non-existent sub-project "unit_test_util"
/usr/bin/make -C readers -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
/bin/echo 'Warning: non-existent sub-project "app"'
Warning: non-existent sub-project "app"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/readers'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -C test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
TEST -- objtools/blast/seqdb_reader/test/seqdb_perf
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C seqdb_writer -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C gene_info_reader -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/gene_info_reader'
/bin/echo 'Warning: non-existent sub-project "gene_info_writer"'
Warning: non-existent sub-project "gene_info_writer"
/usr/bin/make -C services -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
SKIP -- objtools/blast/services/unit_test/blast_services_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C blastdb_format -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast/blastdb_format'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/blast'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C data_loaders -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C genbank -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -C cache -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/bin/echo 'Warning: non-existent sub-project "pubseq"'
Warning: non-existent sub-project "pubseq"
/usr/bin/make -C id2 -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/bin/echo 'Warning: non-existent sub-project "pubseq2"'
Warning: non-existent sub-project "pubseq2"
/usr/bin/make -C gicache -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
NOTE: Skipping project gicache due to unmet requirements:
LMDB
make[9]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
/usr/bin/make -f /build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/src/objtools/data_loaders/genbank/gicache TMPL=ncbi_xreader_gicache -w mark-as-disabled
make[10]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[10]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[9]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/genbank'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "patcher"'
Warning: non-existent sub-project "patcher"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C simple -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/simple'
/usr/bin/make -C alnmgr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "cddalignview"'
Warning: non-existent sub-project "cddalignview"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "manip"'
Warning: non-existent sub-project "manip"
/usr/bin/make -C cleanup -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -C format -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/format'
/usr/bin/make -C edit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "validator"'
Warning: non-existent sub-project "validator"
/bin/echo 'Warning: non-existent sub-project "asniotest"'
Warning: non-existent sub-project "asniotest"
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/usr/bin/make -C seqmasks_io -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "eutils"'
Warning: non-existent sub-project "eutils"
/usr/bin/make -C align_format -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
TEST -- objtools/align_format/unit_test/align_format_unit_test
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format/unit_test'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools/align_format'
/bin/echo 'Warning: non-existent sub-project "snputil"'
Warning: non-existent sub-project "snputil"
/bin/echo 'Warning: non-existent sub-project "uudutil"'
Warning: non-existent sub-project "uudutil"
/bin/echo 'Warning: non-existent sub-project "variation"'
Warning: non-existent sub-project "variation"
/bin/echo 'Warning: non-existent sub-project "writers"'
Warning: non-existent sub-project "writers"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "ctools"'
Warning: non-existent sub-project "ctools"
/bin/echo 'Warning: non-existent sub-project "sra"'
Warning: non-existent sub-project "sra"
/usr/bin/make -C algo -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo'
/usr/bin/make -C dustmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/dustmask'
/usr/bin/make -C winmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/winmask'
/bin/echo 'Warning: non-existent sub-project "sequence"'
Warning: non-existent sub-project "sequence"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast'
/usr/bin/make -C composition_adjustment -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -C core -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/core'
/usr/bin/make -C dbindex -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -C makeindex -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
SKIP -- algo/blast/dbindex/makeindex/makeindex
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/dbindex'
/bin/echo 'Warning: non-existent sub-project "dbindex_search"'
Warning: non-existent sub-project "dbindex_search"
/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/api'
/usr/bin/make -C format -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/format'
/usr/bin/make -C blastinput -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput/unit_test'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/blastinput'
/bin/echo 'Warning: non-existent sub-project "blast_sra_input"'
Warning: non-existent sub-project "blast_sra_input"
/usr/bin/make -C igblast -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/igblast'
/bin/echo 'Warning: non-existent sub-project "gumbel_params"'
Warning: non-existent sub-project "gumbel_params"
/usr/bin/make -C unit_tests -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests'
/usr/bin/make -C blast_format -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -C api -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
TEST -- algo/blast/unit_tests/api/blast_unit_test
TEST -- algo/blast/unit_tests/api/aalookup_unit_test
TEST -- algo/blast/unit_tests/api/seqsrc_unit_test
TEST -- algo/blast/unit_tests/api/delta_unit_test
TEST -- algo/blast/unit_tests/api/ntlookup_unit_test
TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test
TEST -- algo/blast/unit_tests/api/setupfactory_unit_test
TEST -- algo/blast/unit_tests/api/search_strategy_unit_test
TEST -- algo/blast/unit_tests/api/redoalignment_unit_test
TEST -- algo/blast/unit_tests/api/queryinfo_unit_test
TEST -- algo/blast/unit_tests/api/querydata_unit_test
TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test
TEST -- algo/blast/unit_tests/api/blastsetup_unit_test
TEST -- algo/blast/unit_tests/api/blastextend_unit_test
TEST -- algo/blast/unit_tests/api/blastdiag_unit_test
TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test
TEST -- algo/blast/unit_tests/api/optionshandle_unit_test
TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test
TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test
TEST -- algo/blast/unit_tests/api/traceback_unit_test
TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_unit_test
TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test
TEST -- algo/blast/unit_tests/api/phiblast_unit_test
TEST -- algo/blast/unit_tests/api/split_query_unit_test
TEST -- algo/blast/unit_tests/api/scoreblk_unit_test
TEST -- algo/blast/unit_tests/api/hspstream_unit_test
TEST -- algo/blast/unit_tests/api/rps_unit_test
TEST -- algo/blast/unit_tests/api/gapinfo_unit_test
TEST -- algo/blast/unit_tests/api/blasthits_unit_test
TEST -- algo/blast/unit_tests/api/linkhsp_unit_test
TEST -- algo/blast/unit_tests/api/blastengine_unit_test
TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test
TEST -- algo/blast/unit_tests/api/version_reference_unit_test
TEST -- algo/blast/unit_tests/api/ntscan_unit_test
TEST -- algo/blast/unit_tests/api/aascan_unit_test
TEST -- algo/blast/unit_tests/api/remote_blast_unit_test
TEST -- algo/blast/unit_tests/api/uniform_search_unit_test
TEST -- algo/blast/unit_tests/api/blastfilter_unit_test
TEST -- algo/blast/unit_tests/api/blastoptions_unit_test
TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test
TEST -- algo/blast/unit_tests/api/bl2seq_unit_test
TEST -- algo/blast/unit_tests/api/stat_unit_test
TEST -- algo/blast/unit_tests/api/magicblast_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests/api'
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast/unit_tests'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/blast'
/usr/bin/make -C segmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo/segmask'
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/bin/echo 'Warning: non-existent sub-project "structure"'
Warning: non-existent sub-project "structure"
/bin/echo 'Warning: non-existent sub-project "ms"'
Warning: non-existent sub-project "ms"
/bin/echo 'Warning: non-existent sub-project "gnomon"'
Warning: non-existent sub-project "gnomon"
/bin/echo 'Warning: non-existent sub-project "tree"'
Warning: non-existent sub-project "tree"
/bin/echo 'Warning: non-existent sub-project "phy_tree"'
Warning: non-existent sub-project "phy_tree"
/bin/echo 'Warning: non-existent sub-project "seqqa"'
Warning: non-existent sub-project "seqqa"
/bin/echo 'Warning: non-existent sub-project "cobalt"'
Warning: non-existent sub-project "cobalt"
/bin/echo 'Warning: non-existent sub-project "text"'
Warning: non-existent sub-project "text"
/bin/echo 'Warning: non-existent sub-project "volume_merge"'
Warning: non-existent sub-project "volume_merge"
/bin/echo 'Warning: non-existent sub-project "primer"'
Warning: non-existent sub-project "primer"
/bin/echo 'Warning: non-existent sub-project "id_mapper"'
Warning: non-existent sub-project "id_mapper"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/algo'
/usr/bin/make -C misc -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc'
/usr/bin/make -C third_party -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party'
/usr/bin/make -C third_party_static -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party_static'
NOTE: Skipping project third_party_static due to unmet requirements:
-DLL
make[7]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party_static'
make[7]: Nothing to be done for 'mark-as-disabled_r'.
make[7]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party_static'
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc/third_party_static'
/bin/echo 'Warning: non-existent sub-project "clog"'
Warning: non-existent sub-project "clog"
/bin/echo 'Warning: non-existent sub-project "grid_cgi"'
Warning: non-existent sub-project "grid_cgi"
/bin/echo 'Warning: non-existent sub-project "xmlwrapp"'
Warning: non-existent sub-project "xmlwrapp"
/bin/echo 'Warning: non-existent sub-project "eutils_client"'
Warning: non-existent sub-project "eutils_client"
/bin/echo 'Warning: non-existent sub-project "hydra_client"'
Warning: non-existent sub-project "hydra_client"
/bin/echo 'Warning: non-existent sub-project "discrepancy_report"'
Warning: non-existent sub-project "discrepancy_report"
/bin/echo 'Warning: non-existent sub-project "discrepancy"'
Warning: non-existent sub-project "discrepancy"
/bin/echo 'Warning: non-existent sub-project "xmlreaders"'
Warning: non-existent sub-project "xmlreaders"
/bin/echo 'Warning: non-existent sub-project "hgvs"'
Warning: non-existent sub-project "hgvs"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "jsonwrapp"'
Warning: non-existent sub-project "jsonwrapp"
/bin/echo 'Warning: non-existent sub-project "biosample_util"'
Warning: non-existent sub-project "biosample_util"
/bin/echo 'Warning: non-existent sub-project "data_loaders_util"'
Warning: non-existent sub-project "data_loaders_util"
/bin/echo 'Warning: non-existent sub-project "lapackwrapp"'
Warning: non-existent sub-project "lapackwrapp"
/bin/echo 'Warning: non-existent sub-project "cgi_redirect"'
Warning: non-existent sub-project "cgi_redirect"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/misc'
/bin/echo 'Warning: non-existent sub-project "gui"'
Warning: non-existent sub-project "gui"
/usr/bin/make -C app -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "asn2asn"'
Warning: non-existent sub-project "asn2asn"
/bin/echo 'Warning: non-existent sub-project "asn2fasta"'
Warning: non-existent sub-project "asn2fasta"
/bin/echo 'Warning: non-existent sub-project "asn2flat"'
Warning: non-existent sub-project "asn2flat"
/bin/echo 'Warning: non-existent sub-project "asnval"'
Warning: non-existent sub-project "asnval"
/bin/echo 'Warning: non-existent sub-project "asn_cleanup"'
Warning: non-existent sub-project "asn_cleanup"
/bin/echo 'Warning: non-existent sub-project "id1_fetch"'
Warning: non-existent sub-project "id1_fetch"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
SKIP -- app/blast/blastp
SKIP -- app/blast/blastn
SKIP -- app/blast/blastx
SKIP -- app/blast/tblastn
SKIP -- app/blast/tblastx
SKIP -- app/blast/psiblast
SKIP -- app/blast/rpsblast
SKIP -- app/blast/rpstblastn
SKIP -- app/blast/blast_formatter
SKIP -- app/blast/deltablast
SKIP -- app/blast/seedtop
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blast'
/bin/echo 'Warning: non-existent sub-project "convert_seq"'
Warning: non-existent sub-project "convert_seq"
/bin/echo 'Warning: non-existent sub-project "nmer_repeats"'
Warning: non-existent sub-project "nmer_repeats"
/bin/echo 'Warning: non-existent sub-project "objmgr"'
Warning: non-existent sub-project "objmgr"
/bin/echo 'Warning: non-existent sub-project "gi2taxid"'
Warning: non-existent sub-project "gi2taxid"
/bin/echo 'Warning: non-existent sub-project "netschedule"'
Warning: non-existent sub-project "netschedule"
/bin/echo 'Warning: non-existent sub-project "grid"'
Warning: non-existent sub-project "grid"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "igblast"'
Warning: non-existent sub-project "igblast"
/usr/bin/make -C winmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
SKIP -- app/winmasker/winmasker
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/winmasker'
/usr/bin/make -C dustmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
SKIP -- app/dustmasker/dustmasker
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/dustmasker'
/usr/bin/make -C segmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
SKIP -- app/segmasker/segmasker
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/segmasker'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
SKIP -- app/blastdb/blastdbcmd
SKIP -- app/blastdb/makeblastdb
SKIP -- app/blastdb/blastdb_aliastool
SKIP -- app/blastdb/blastdbcheck
SKIP -- app/blastdb/convert2blastmask
SKIP -- app/blastdb/blastdbcp
SKIP -- app/blastdb/makeprofiledb
make[6]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app/blastdb'
/bin/echo 'Warning: non-existent sub-project "vecscreen"'
Warning: non-existent sub-project "vecscreen"
/bin/echo 'Warning: non-existent sub-project "agpconvert"'
Warning: non-existent sub-project "agpconvert"
/bin/echo 'Warning: non-existent sub-project "id2_fetch"'
Warning: non-existent sub-project "id2_fetch"
/bin/echo 'Warning: non-existent sub-project "agp_validate"'
Warning: non-existent sub-project "agp_validate"
/bin/echo 'Warning: non-existent sub-project "objextract"'
Warning: non-existent sub-project "objextract"
/bin/echo 'Warning: non-existent sub-project "bdb_env_keeper"'
Warning: non-existent sub-project "bdb_env_keeper"
/bin/echo 'Warning: non-existent sub-project "nw_aligner"'
Warning: non-existent sub-project "nw_aligner"
/bin/echo 'Warning: non-existent sub-project "speedtest"'
Warning: non-existent sub-project "speedtest"
/bin/echo 'Warning: non-existent sub-project "idmapper"'
Warning: non-existent sub-project "idmapper"
/bin/echo 'Warning: non-existent sub-project "formatguess"'
Warning: non-existent sub-project "formatguess"
/bin/echo 'Warning: non-existent sub-project "multireader"'
Warning: non-existent sub-project "multireader"
/bin/echo 'Warning: non-existent sub-project "read_blast_result"'
Warning: non-existent sub-project "read_blast_result"
/bin/echo 'Warning: non-existent sub-project "splign"'
Warning: non-existent sub-project "splign"
/bin/echo 'Warning: non-existent sub-project "hfilter"'
Warning: non-existent sub-project "hfilter"
/bin/echo 'Warning: non-existent sub-project "annotwriter"'
Warning: non-existent sub-project "annotwriter"
/bin/echo 'Warning: non-existent sub-project "compart"'
Warning: non-existent sub-project "compart"
/bin/echo 'Warning: non-existent sub-project "streamtest"'
Warning: non-existent sub-project "streamtest"
/bin/echo 'Warning: non-existent sub-project "lds2_indexer"'
Warning: non-existent sub-project "lds2_indexer"
/bin/echo 'Warning: non-existent sub-project "discrepancy_report"'
Warning: non-existent sub-project "discrepancy_report"
/bin/echo 'Warning: non-existent sub-project "biosample_chk"'
Warning: non-existent sub-project "biosample_chk"
/bin/echo 'Warning: non-existent sub-project "gap_stats"'
Warning: non-existent sub-project "gap_stats"
/bin/echo 'Warning: non-existent sub-project "table2asn"'
Warning: non-existent sub-project "table2asn"
/bin/echo 'Warning: non-existent sub-project "srcchk"'
Warning: non-existent sub-project "srcchk"
/bin/echo 'Warning: non-existent sub-project "tableval"'
Warning: non-existent sub-project "tableval"
/bin/echo 'Warning: non-existent sub-project "ncbi_encrypt"'
Warning: non-existent sub-project "ncbi_encrypt"
/bin/echo 'Warning: non-existent sub-project "ssub_fork"'
Warning: non-existent sub-project "ssub_fork"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "magicblast"'
Warning: non-existent sub-project "magicblast"
/bin/echo 'Warning: non-existent sub-project "split_cache"'
Warning: non-existent sub-project "split_cache"
/bin/echo 'Warning: non-existent sub-project "wig2table"'
Warning: non-existent sub-project "wig2table"
/bin/echo 'Warning: non-existent sub-project "netcache"'
Warning: non-existent sub-project "netcache"
/bin/echo 'Warning: non-existent sub-project "rmblastn"'
Warning: non-existent sub-project "rmblastn"
/bin/echo 'Warning: non-existent sub-project "dblb"'
Warning: non-existent sub-project "dblb"
/bin/echo 'Warning: non-existent sub-project "tls"'
Warning: non-existent sub-project "tls"
/bin/echo 'Warning: non-existent sub-project "idfetch"'
Warning: non-existent sub-project "idfetch"
make[5]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "sample"'
Warning: non-existent sub-project "sample"
/bin/echo 'Warning: non-existent sub-project "internal"'
Warning: non-existent sub-project "internal"
make[4]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
----------------------------------------------------------------------
Building check script...
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/align_format/unit_test/align_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/blastinput/unit_test/blastinput_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blast_format/blast_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blastdb/bdbloader_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/aalookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqsrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/delta_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntlookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqinfosrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/setupfactory_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/search_strategy_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/redoalignment_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/queryinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/querydata_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastsetup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastextend_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmcreate_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_iteration_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_culling_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/optionshandle_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/msa2pssm_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/tracebacksearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/traceback_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psibl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/prelimsearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/phiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/split_query_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/scoreblk_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspstream_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/rps_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gapinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blasthits_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/linkhsp_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastengine_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/subj_ranges_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/version_reference_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntscan_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/remote_blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/uniform_search_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastfilter_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastoptions_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gencode_singleton_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/bl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/stat_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/magicblast_unit_test (unmet CHECK_REQUIRES)
Done.
OK -- [serial/datatool] datatool.sh (real 2.10, user 1.12, sys 0.52)
SKP -- [serial/datatool] datatool_xml.sh
OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.17, user 0.04, sys 0.07)
OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.32, user 0.07, sys 0.08)
OK -- [algo/blast/unit_tests/api] aascan_unit_test (real 7.03, user 3.98, sys 0.51)
Succeeded : 4
Timeout : 0
Failed : 0
Absent : 1
******** ALL TESTS COMPLETED SUCCESSFULLY ********
make[3]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++/BUILD/build'
make[2]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0/c++'
c++/BUILD/build/check.sh concat_err
cat c++/BUILD/build/check.sh.out_err
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
fakeroot debian/rules binary-arch
dh binary-arch -Dc++ --with autotools_dev
dh_testroot -a -O-Dc\+\+
dh_prep -a -O-Dc\+\+
dh_installdirs -a -O-Dc\+\+
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
# cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/
cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
debian/rules override_dh_install-arch
make[1]: Entering directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
# dh_install
mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+
mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+
mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast
mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb
mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \
debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter
rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \
debian/ncbi-blast+/usr/bin/datatool debian/ncbi-blast+/usr/bin/run_with_lock \
debian/ncbi-blast+/usr/bin/project_tree_builder
for x in debian/ncbi-blast+/usr/bin/*; do \
LD_LIBRARY_PATH=c++/BUILD/lib ldd $x; \
done 2>/dev/null | awk '/BUILD/ { print $3 }' | sort -u | \
xargs cp -v -t debian/ncbi-blast+/usr/lib/ncbi-blast+
'c++/BUILD/lib/libalign_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libalign_format.so'
'c++/BUILD/lib/libbiblio.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libbiblio.so'
'c++/BUILD/lib/libblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast.so'
'c++/BUILD/lib/libblast_services.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast_services.so'
'c++/BUILD/lib/libblastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb.so'
'c++/BUILD/lib/libblastdb_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb_format.so'
'c++/BUILD/lib/libblastinput.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastinput.so'
'c++/BUILD/lib/libblastxml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml.so'
'c++/BUILD/lib/libblastxml2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml2.so'
'c++/BUILD/lib/libcomposition_adjustment.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcomposition_adjustment.so'
'c++/BUILD/lib/libconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libconnect.so'
'c++/BUILD/lib/libcreaders.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcreaders.so'
'c++/BUILD/lib/libgbseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgbseq.so'
'c++/BUILD/lib/libgene_info.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgene_info.so'
'c++/BUILD/lib/libgeneral.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgeneral.so'
'c++/BUILD/lib/libgenome_collection.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgenome_collection.so'
'c++/BUILD/lib/libid1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid1.so'
'c++/BUILD/lib/libid2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid2.so'
'c++/BUILD/lib/libmedlars.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedlars.so'
'c++/BUILD/lib/libmedline.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedline.so'
'c++/BUILD/lib/libmla.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmla.so'
'c++/BUILD/lib/libmlacli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmlacli.so'
'c++/BUILD/lib/libncbi_xloader_blastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so'
'c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so'
'c++/BUILD/lib/libncbi_xloader_genbank.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so'
'c++/BUILD/lib/libncbi_xreader.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader.so'
'c++/BUILD/lib/libncbi_xreader_cache.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_cache.so'
'c++/BUILD/lib/libncbi_xreader_id1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id1.so'
'c++/BUILD/lib/libncbi_xreader_id2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id2.so'
'c++/BUILD/lib/libpub.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpub.so'
'c++/BUILD/lib/libpubmed.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpubmed.so'
'c++/BUILD/lib/libscoremat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libscoremat.so'
'c++/BUILD/lib/libseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseq.so'
'c++/BUILD/lib/libseqcode.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqcode.so'
'c++/BUILD/lib/libseqdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqdb.so'
'c++/BUILD/lib/libseqedit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqedit.so'
'c++/BUILD/lib/libseqmasks_io.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqmasks_io.so'
'c++/BUILD/lib/libseqset.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqset.so'
'c++/BUILD/lib/libseqsplit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqsplit.so'
'c++/BUILD/lib/libsequtil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsequtil.so'
'c++/BUILD/lib/libsubmit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsubmit.so'
'c++/BUILD/lib/libtables.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtables.so'
'c++/BUILD/lib/libtaxon1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon1.so'
'c++/BUILD/lib/libtaxon3.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon3.so'
'c++/BUILD/lib/libvalid.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libvalid.so'
'c++/BUILD/lib/libwritedb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libwritedb.so'
'c++/BUILD/lib/libxalgoblastdbindex.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgoblastdbindex.so'
'c++/BUILD/lib/libxalgodustmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgodustmask.so'
'c++/BUILD/lib/libxalgosegmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgosegmask.so'
'c++/BUILD/lib/libxalgowinmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgowinmask.so'
'c++/BUILD/lib/libxalnmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalnmgr.so'
'c++/BUILD/lib/libxblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblast.so'
'c++/BUILD/lib/libxblastformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblastformat.so'
'c++/BUILD/lib/libxcgi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcgi.so'
'c++/BUILD/lib/libxcleanup.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so'
'c++/BUILD/lib/libxcompress.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcompress.so'
'c++/BUILD/lib/libxconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxconnect.so'
'c++/BUILD/lib/libxformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxformat.so'
'c++/BUILD/lib/libxhtml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxhtml.so'
'c++/BUILD/lib/libxncbi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxncbi.so'
'c++/BUILD/lib/libxnetblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblast.so'
'c++/BUILD/lib/libxnetblastcli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblastcli.so'
'c++/BUILD/lib/libxobjmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjmgr.so'
'c++/BUILD/lib/libxobjread.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjread.so'
'c++/BUILD/lib/libxobjutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjutil.so'
'c++/BUILD/lib/libxregexp.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxregexp.so'
'c++/BUILD/lib/libxser.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxser.so'
'c++/BUILD/lib/libxutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxutil.so'
make[1]: Leaving directory '/build/ncbi-blast+-NJ30XM/ncbi-blast+-2.6.0'
dh_installdocs -a -O-Dc\+\+
dh_installchangelogs -a -O-Dc\+\+
dh_installexamples -a -O-Dc\+\+
dh_installman -a -O-Dc\+\+
dh_installcatalogs -a -O-Dc\+\+
dh_installcron -a -O-Dc\+\+
dh_installdebconf -a -O-Dc\+\+
dh_installemacsen -a -O-Dc\+\+
dh_installifupdown -a -O-Dc\+\+
dh_installinfo -a -O-Dc\+\+
dh_installinit -a -O-Dc\+\+
dh_installmenu -a -O-Dc\+\+
dh_installmime -a -O-Dc\+\+
dh_installmodules -a -O-Dc\+\+
dh_installlogcheck -a -O-Dc\+\+
dh_installlogrotate -a -O-Dc\+\+
dh_installpam -a -O-Dc\+\+
dh_installppp -a -O-Dc\+\+
dh_installudev -a -O-Dc\+\+
dh_installgsettings -a -O-Dc\+\+
dh_bugfiles -a -O-Dc\+\+
dh_ucf -a -O-Dc\+\+
dh_lintian -a -O-Dc\+\+
dh_gconf -a -O-Dc\+\+
dh_icons -a -O-Dc\+\+
dh_perl -a -O-Dc\+\+
dh_usrlocal -a -O-Dc\+\+
dh_link -a -O-Dc\+\+
dh_installwm -a -O-Dc\+\+
dh_installxfonts -a -O-Dc\+\+
dh_strip_nondeterminism -a -O-Dc\+\+
dh_compress -a -O-Dc\+\+
dh_fixperms -a -O-Dc\+\+
dh_strip -a -O-Dc\+\+
dh_makeshlibs -a -O-Dc\+\+
dh_shlibdeps -a -O-Dc\+\+
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so was not linked against libconnect.so (it uses none of the library's symbols)
dh_installdeb -a -O-Dc\+\+
dh_gencontrol -a -O-Dc\+\+
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O-Dc\+\+
dh_builddeb -a -O-Dc\+\+
dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.6.0-1_armhf.deb'.
dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.6.0-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genbuildinfo: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../ncbi-blast+_2.6.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build ncbi-blast+-2.6.0
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-01-27T13:40:58Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ncbi-blast+_2.6.0-1_armhf.changes:
----------------------------------
Format: 1.8
Date: Sun, 15 Jan 2017 17:12:27 +0000
Source: ncbi-blast+
Binary: ncbi-blast+ ncbi-blast+-legacy blast2
Architecture: armhf
Version: 2.6.0-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Olivier Sallou <osallou@debian.org>
Description:
blast2 - transitional dummy package to ncbi-blast+-legacy
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Changes:
ncbi-blast+ (2.6.0-1) unstable; urgency=medium
.
* New upstream release
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Checksums-Sha256:
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Files:
4dc9edc6f155bd6be0cb1efe5f7eda47 155384290 debug extra ncbi-blast+-dbgsym_2.6.0-1_armhf.deb
249f0170cb112eeb09337958317f4ffc 5407 science optional ncbi-blast+_2.6.0-1_armhf.buildinfo
fbb3542a9d665b91d98894b0db199b18 7990362 science optional ncbi-blast+_2.6.0-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ncbi-blast+-dbgsym_2.6.0-1_armhf.deb
------------------------------------
new debian package, version 2.0.
size 155384290 bytes: control archive=5341 bytes.
4176 bytes, 13 lines control
9752 bytes, 92 lines md5sums
Package: ncbi-blast+-dbgsym
Source: ncbi-blast+
Version: 2.6.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 161275
Depends: ncbi-blast+ (= 2.6.0-1)
Section: debug
Priority: extra
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: Debug symbols for ncbi-blast+
Auto-Built-Package: debug-symbols
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drwxr-xr-x root/root 0 2017-01-15 17:12 ./
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lrwxrwxrwx root/root 0 2017-01-15 17:12 ./usr/share/doc/ncbi-blast+-dbgsym -> ncbi-blast+
ncbi-blast+_2.6.0-1_armhf.deb
-----------------------------
new debian package, version 2.0.
size 7990362 bytes: control archive=3757 bytes.
1231 bytes, 24 lines control
6674 bytes, 101 lines md5sums
Package: ncbi-blast+
Version: 2.6.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 33063
Depends: ncbi-data, python, perl:any, libbz2-1.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgnutls30 (>= 3.5.6), libgomp1 (>= 4.9), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0)
Enhances: t-coffee
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.
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Build Architecture: armhf
Build-Space: 2465108
Build-Time: 17031
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 330
Job: ncbi-blast+_2.6.0-1
Machine Architecture: armhf
Package: ncbi-blast+
Package-Time: 17431
Source-Version: 2.6.0-1
Space: 2465108
Status: successful
Version: 2.6.0-1
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Finished at 2017-01-27T13:40:58Z
Build needed 04:50:31, 2465108k disc space