ncbi-blast+ →
2.2.28-2 →
armhf → 2013-06-20 18:02:18
sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testbuildd.raspbian.org
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║ ncbi-blast+ 2.2.28-2 (armhf) 20 Jun 2013 13:35 ║
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Package: ncbi-blast+
Version: 2.2.28-2
Source Version: 2.2.28-2
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-ZClXTI' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-a0bc1294-7c1c-4f2a-ba09-60ee15c9d2b5' with '«CHROOT»'
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Get:3 http://172.17.0.1 jessie-staging/main Sources [6639 kB]
Get:4 http://172.17.0.1 jessie-staging/main armhf Packages [7647 kB]
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NOTICE: 'ncbi-blast+' packaging is maintained in the 'Svn' version control system at:
svn://svn.debian.org/debian-med/trunk/packages/ncbi-blast+/trunk/
Need to get 13.5 MB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main ncbi-blast+ 2.2.28-2 (dsc) [2274 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main ncbi-blast+ 2.2.28-2 (tar) [13.5 MB]
Get:3 http://172.17.0.1/private/ jessie-staging/main ncbi-blast+ 2.2.28-2 (diff) [23.8 kB]
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/build/ncbi-blast+-ZClXTI/resolver-HomyCl/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
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Installing build dependencies
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The following NEW packages will be installed:
sbuild-build-depends-core-dummy
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Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), autotools-dev (>= 20100122), debhelper (>= 9), dpkg-dev (>= 1.16.1), libboost-test-dev, libbz2-dev, libpcre3-dev, quilt, time, zlib1g-dev
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), autotools-dev (>= 20100122), debhelper (>= 9), dpkg-dev (>= 1.16.1), libboost-test-dev, libbz2-dev, libpcre3-dev, quilt, time, zlib1g-dev
dpkg-deb: building package `sbuild-build-depends-ncbi-blast+-dummy' in `/build/ncbi-blast+-ZClXTI/resolver-N2xENS/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install ncbi-blast+ build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
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The following extra packages will be installed:
autotools-dev bsdmainutils debhelper diffstat file gettext gettext-base
groff-base html2text intltool-debian libasprintf0c2 libboost-test-dev
libboost-test1.49-dev libboost-test1.49.0 libboost1.49-dev libbz2-dev
libcroco3 libffi6 libglib2.0-0 libicu48 libmagic1 libpcre3-dev libpcrecpp0
libpipeline1 libunistring0 libxml2 man-db po-debconf quilt time zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff libboost1.49-doc
libboost-chrono1.49-dev libboost-date-time1.49-dev
libboost-filesystem1.49-dev libboost-graph-parallel1.49-dev
libboost-graph1.49-dev libboost-iostreams1.49-dev libboost-locale1.49-dev
libboost-math1.49-dev libboost-mpi1.49-dev libboost-program-options1.49-dev
libboost-python1.49-dev libboost-random1.49-dev libboost-regex1.49-dev
libboost-serialization1.49-dev libboost-signals1.49-dev
libboost-system1.49-dev libboost-thread1.49-dev libboost-timer1.49-dev
libboost-wave1.49-dev xsltproc doxygen docbook-xml docbook-xsl default-jdk
fop less www-browser libmail-box-perl procmail graphviz default-mta
mail-transport-agent
Recommended packages:
curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autotools-dev bsdmainutils debhelper diffstat file gettext gettext-base
groff-base html2text intltool-debian libasprintf0c2 libboost-test-dev
libboost-test1.49-dev libboost-test1.49.0 libboost1.49-dev libbz2-dev
libcroco3 libffi6 libglib2.0-0 libicu48 libmagic1 libpcre3-dev libpcrecpp0
libpipeline1 libunistring0 libxml2 man-db po-debconf quilt
sbuild-build-depends-ncbi-blast+-dummy time zlib1g-dev
0 upgraded, 32 newly installed, 0 to remove and 4 not upgraded.
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Get:16 http://172.17.0.1/private/ jessie-staging/main time armhf 1.7-24 [34.4 kB]
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Get:20 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu2 [223 kB]
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Get:30 http://172.17.0.1/private/ jessie-staging/main quilt all 0.60-8 [381 kB]
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┌──────────────────────────────────────────────────────────────────────────────┐
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Kernel: Linux 3.9.4-imx4 armhf (armv7l)
Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2+rpi1 gcc-4.6_4.6.4-2+rpi1 libc6-dev_2.17-3 libstdc++6_4.8.0-7+rpi1 libstdc++6-4.6-dev_4.6.4-2+rpi1 linux-libc-dev_3.2.41-2+rpi1
Package versions: apt_0.9.7.8+rpi1 autotools-dev_20130515.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 coreutils_8.13-3.5 cpio_2.11+dfsg-0.1 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2+rpi1 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20120909 debianutils_4.3.4 diffstat_1.55-3 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-2 findutils_4.4.2-5 g++_4:4.6.3-8 g++-4.6_4.6.4-2+rpi1 gcc_4:4.6.3-8 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-2+rpi1 gcc-4.6-base_4.6.4-2+rpi1 gcc-4.7-base_4.7.3-4+rpi1 gcc-4.8-base_4.8.0-7+rpi1 gettext_0.18.2.1-1 gettext-base_0.18.2.1-1 gnupg_1.4.12-7 gpgv_1.4.12-7 grep_2.14-2 groff-base_1.22.2-3 gzip_1.5-1.1 hostname_3.12 html2text_1.3.2a-16 initramfs-tools_0.112 initscripts_2.88dsf-41 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.1-3.1+rpi1 kmod_9-3 libacl1_2.2.52-1 libapt-pkg4.12_0.9.7.8+rpi1 libasprintf0c2_0.18.2.1-1 libattr1_1:2.4.47-1 libblkid1_2.20.1-5.4 libboost-test-dev_1.49.0.1 libboost-test1.49-dev_1.49.0-4 libboost-test1.49.0_1.49.0-4 libboost1.49-dev_1.49.0-4 libbz2-1.0_1.0.6-4 libbz2-dev_1.0.6-4 libc-bin_2.17-3 libc-dev-bin_2.17-3 libc6_2.17-3 libc6-dev_2.17-3 libcap2_1:2.22-1.2 libclass-isa-perl_0.36-5 libcomerr2_1.42.5-1.1 libcroco3_0.6.8-2 libdb5.1_5.1.29-5 libdbus-1-3_1.6.10-1 libdpkg-perl_1.16.10 libffi6_3.0.13-4 libgc1c2_1:7.1-9.1 libgcc1_1:4.8.0-7+rpi1 libgdbm3_1.8.3-11 libglib2.0-0_2.36.1-2build1 libgmp10_2:5.1.2+dfsg-1 libgomp1_4.8.0-7+rpi1 libicu48_4.8.1.1-12 libklibc_2.0.1-3.1+rpi1 libkmod2_9-3 liblocale-gettext-perl_1.05-7 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.14-2 libmount1_2.20.1-5.4 libmpc2_0.9-4 libmpc3_1.0.1-1 libmpfr4_3.1.1-1 libncurses5_5.9+20130504-1 libncursesw5_5.9+20130504-1 libpam-modules_1.1.3-9 libpam-modules-bin_1.1.3-9 libpam-runtime_1.1.3-9 libpam0g_1.1.3-9 libpcre3_1:8.31-2 libpcre3-dev_1:8.31-2 libpcrecpp0_1:8.31-2 libpipeline1_1.2.3-1 libprocps0_1:3.3.4-2 libreadline6_6.2+dfsg-0.1 libselinux1_2.1.13-2 libsemanage-common_2.1.10-2 libsemanage1_2.1.10-2 libsepol1_2.1.9-2 libslang2_2.2.4-15 libss2_1.42.5-1.1 libstdc++6_4.8.0-7+rpi1 libstdc++6-4.6-dev_4.6.4-2+rpi1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9+20130504-1 libudev0_175-7.2 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23+nmu1 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.4 libxml2_2.8.0+dfsg1-7+nmu1 linux-libc-dev_3.2.41-2+rpi1 login_1:4.1.5.1-1 lsb-base_4.1+Debian8+rpi1 make_3.81-8.2 makedev_2.3.1-93 man-db_2.6.3-7 mawk_1.3.3-17 mount_2.20.1-5.4 multiarch-support_2.17-3 ncurses-base_5.9+20130504-1 ncurses-bin_5.9+20130504-1 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-21+rpi1 perl-base_5.14.2-21+rpi1 perl-modules_5.14.2-21+rpi1 plymouth_0.8.8-6 po-debconf_1.0.16+nmu2 procps_1:3.3.4-2 quilt_0.60-8 raspbian-archive-keyring_20120528.2 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.2.2-1 sensible-utils_0.0.7 sysv-rc_2.88dsf-41 sysvinit_2.88dsf-41 sysvinit-utils_2.88dsf-41 tar_1.26+dfsg-5 time_1.7-24 tzdata_2013c-2 udev_175-7.2 util-linux_2.20.1-5.4 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1 zlib1g-dev_1:1.2.8.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Mon Jun 3 03:44:46 2013 UTC using RSA key ID F14A64A2
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.2.28-2.dsc
dpkg-source: info: extracting ncbi-blast+ in ncbi-blast+-2.2.28
dpkg-source: info: unpacking ncbi-blast+_2.2.28.orig.tar.gz
dpkg-source: info: unpacking ncbi-blast+_2.2.28-2.debian.tar.gz
dpkg-source: info: applying enable_clean_after_failed_compile
dpkg-source: info: applying hurd_fixes
dpkg-source: info: applying legacy_rename_rpsblast
dpkg-source: info: applying fix_lib_deps
dpkg-source: info: applying no_multiarch_rpath
dpkg-source: info: applying use_pie_for_apps
dpkg-source: info: applying skip_services_unit_test
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=POSIX
LOGNAME=root
LS_OPTIONS=--color=auto
MAIL=/var/mail/root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/root
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-a0bc1294-7c1c-4f2a-ba09-60ee15c9d2b5
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
SHLVL=1
SSH_CLIENT=192.168.1.2 53797 22
SSH_CONNECTION=192.168.1.2 53797 192.168.1.45 22
SSH_TTY=/dev/pts/0
TERM=xterm
USER=root
XDG_SESSION_COOKIE=106ef489ba27ee071ab233f6518d3bce-1371250784.150246-1803625542
_=/etc/init.d/buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package ncbi-blast+
dpkg-buildpackage: source version 2.2.28-2
dpkg-source --before-build ncbi-blast+-2.2.28
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean -Dc++ --with autotools_dev --with quilt
dh_testdir -O-Dc\+\+
dh_auto_clean -O-Dc\+\+
dh_autotools-dev_restoreconfig -O-Dc\+\+
dh_quilt_unpatch -O-Dc\+\+
Removing patch skip_services_unit_test
Restoring c++/src/objtools/blast/services/unit_test/Makefile.blast_services_unit_test.app
Removing patch use_pie_for_apps
Restoring c++/src/build-system/Makefile.app.in
Removing patch no_multiarch_rpath
Restoring c++/src/build-system/configure
Restoring c++/src/build-system/configure.ac
Removing patch fix_lib_deps
Restoring c++/src/algo/blast/core/Makefile.blast.lib
Restoring c++/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib
Restoring c++/src/algo/blast/dbindex/makeindex/Makefile.makeindex.app
Restoring c++/src/algo/blast/format/Makefile.xblastformat.lib
Restoring c++/src/algo/blast/api/Makefile.xblast.lib
Restoring c++/src/algo/blast/blastinput/Makefile.blastinput.lib
Restoring c++/src/algo/blast/Makefile.blast_macros.mk
Restoring c++/src/algo/winmask/Makefile.xalgowinmask.lib
Restoring c++/src/algo/dustmask/Makefile.xalgodustmask.lib
Restoring c++/src/algo/segmask/Makefile.xalgosegmask.lib
Restoring c++/src/cgi/Makefile.cgi.lib
Restoring c++/src/html/Makefile.html.lib
Restoring c++/src/objects/blast/Makefile.xnetblastcli.lib
Restoring c++/src/objects/blast/Makefile.blast.lib
Restoring c++/src/objects/blastxml/Makefile.blastxml.lib
Restoring c++/src/objects/entrez2/Makefile.entrez2.lib
Restoring c++/src/objects/entrez2/Makefile.entrez2cli.lib
Restoring c++/src/objects/scoremat/Makefile.scoremat.lib
Restoring c++/src/objects/seqedit/Makefile.seqedit.lib
Restoring c++/src/objects/submit/Makefile.submit.lib
Restoring c++/src/objects/biblio/Makefile.biblio.lib
Restoring c++/src/objects/blastdb/Makefile.blastdb.lib
Restoring c++/src/objects/general/Makefile.general.lib
Restoring c++/src/objects/genomecoll/Makefile.genome_collection.lib
Restoring c++/src/objects/id1/Makefile.id1.lib
Restoring c++/src/objects/id2/Makefile.id2.lib
Restoring c++/src/objects/medline/Makefile.medline.lib
Restoring c++/src/objects/pub/Makefile.pub.lib
Restoring c++/src/objects/seq/Makefile.seq.lib
Restoring c++/src/objects/seqcode/Makefile.seqcode.lib
Restoring c++/src/objects/seqset/Makefile.seqset.lib
Restoring c++/src/objects/seqsplit/Makefile.seqsplit.lib
Restoring c++/src/objtools/align_format/Makefile.align_format.lib
Restoring c++/src/objtools/alnmgr/Makefile.alnmgr.lib
Restoring c++/src/objtools/readers/Makefile.xobjread.lib
Restoring c++/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib
Restoring c++/src/objtools/simple/Makefile.xobjsimple.lib
Restoring c++/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib
Restoring c++/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib
Restoring c++/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib
Restoring c++/src/objtools/blast/services/Makefile.blast_services.lib
Restoring c++/src/objtools/blast/seqdb_writer/Makefile.writedb.lib
Restoring c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib
Restoring c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib
Restoring c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib
Restoring c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib
Restoring c++/src/objtools/data_loaders/genbank/cache/Makefile.ncbi_xreader_cache.lib
Restoring c++/src/objtools/data_loaders/genbank/id1/Makefile.ncbi_xreader_id1.lib
Restoring c++/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib
Restoring c++/src/connect/Makefile.xconnect.lib
Restoring c++/src/connect/ext/Makefile.xconnext.lib
Restoring c++/src/objmgr/util/Makefile.util.lib
Restoring c++/src/objmgr/split/Makefile.id2_split.lib
Restoring c++/src/util/compress/api/Makefile.compress.lib
Restoring c++/src/util/sequtil/Makefile.sequtil.lib
Restoring c++/src/util/Makefile.util.lib
Restoring c++/src/util/xregexp/Makefile.xregexp.lib
Restoring c++/src/corelib/Makefile.test_boost.lib
Restoring c++/src/corelib/Makefile.test_mt.lib
Restoring c++/src/serial/Makefile.serial.lib
Removing patch legacy_rename_rpsblast
Restoring c++/src/app/blast/legacy_blast.pl
Removing patch hurd_fixes
Restoring c++/src/build-system/configure
Restoring c++/src/build-system/configure.ac
Restoring c++/src/connect/ncbi_socket_cxx.cpp
Restoring c++/src/connect/ext/ncbi_localnet.c
Removing patch enable_clean_after_failed_compile
Restoring c++/src/build-system/new_module.sh.in
No patches applied
debian/rules override_dh_clean
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
dh_clean
#Tricky - for each module directory there may be several module files
#or there may be none but then there is still a module named after the
#directory. Clean everything!
for x in c++/src/objects/* ; do \
(cd "$x" && ( \
mods="`echo *.module`" ; \
[ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \
for mod in $mods ; do \
../../../BUILD/build/new_module.sh $mod purge_sources ; \
done ) ; \
) ; \
done
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
make[1]: [override_dh_clean] Error 127 (ignored)
rm -rf c++/compilers/dll c++/config.log c++/Makefile
rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module
find -name check_exec.pid -delete
rm -rf c++/BUILD
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
debian/rules build-arch
dh build-arch -Dc++ --with autotools_dev --with quilt
dh_testdir -a -O-Dc\+\+
dh_autotools-dev_updateconfig -a -O-Dc\+\+
dh_quilt_patch -a -O-Dc\+\+
Applying patch enable_clean_after_failed_compile
patching file c++/src/build-system/new_module.sh.in
Applying patch hurd_fixes
patching file c++/src/build-system/configure
patching file c++/src/build-system/configure.ac
patching file c++/src/connect/ncbi_socket_cxx.cpp
patching file c++/src/connect/ext/ncbi_localnet.c
Applying patch legacy_rename_rpsblast
patching file c++/src/app/blast/legacy_blast.pl
Applying patch fix_lib_deps
patching file c++/src/algo/blast/core/Makefile.blast.lib
patching file c++/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib
patching file c++/src/algo/blast/format/Makefile.xblastformat.lib
patching file c++/src/algo/winmask/Makefile.xalgowinmask.lib
patching file c++/src/cgi/Makefile.cgi.lib
patching file c++/src/html/Makefile.html.lib
patching file c++/src/objects/blast/Makefile.xnetblastcli.lib
patching file c++/src/objtools/align_format/Makefile.align_format.lib
patching file c++/src/objtools/alnmgr/Makefile.alnmgr.lib
patching file c++/src/objtools/readers/Makefile.xobjread.lib
patching file c++/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib
patching file c++/src/objtools/simple/Makefile.xobjsimple.lib
patching file c++/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib
patching file c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib
patching file c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib
patching file c++/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib
patching file c++/src/algo/blast/api/Makefile.xblast.lib
patching file c++/src/algo/blast/blastinput/Makefile.blastinput.lib
patching file c++/src/algo/dustmask/Makefile.xalgodustmask.lib
patching file c++/src/connect/Makefile.xconnect.lib
patching file c++/src/connect/ext/Makefile.xconnext.lib
patching file c++/src/objects/blast/Makefile.blast.lib
patching file c++/src/objects/blastxml/Makefile.blastxml.lib
patching file c++/src/objects/entrez2/Makefile.entrez2.lib
patching file c++/src/objects/entrez2/Makefile.entrez2cli.lib
patching file c++/src/objects/scoremat/Makefile.scoremat.lib
patching file c++/src/objects/seqedit/Makefile.seqedit.lib
patching file c++/src/objects/submit/Makefile.submit.lib
patching file c++/src/objmgr/util/Makefile.util.lib
patching file c++/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib
patching file c++/src/objtools/blast/services/Makefile.blast_services.lib
patching file c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib
patching file c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib
patching file c++/src/objtools/data_loaders/genbank/cache/Makefile.ncbi_xreader_cache.lib
patching file c++/src/objtools/data_loaders/genbank/id1/Makefile.ncbi_xreader_id1.lib
patching file c++/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib
patching file c++/src/util/compress/api/Makefile.compress.lib
patching file c++/src/util/sequtil/Makefile.sequtil.lib
patching file c++/src/corelib/Makefile.test_boost.lib
patching file c++/src/corelib/Makefile.test_mt.lib
patching file c++/src/objects/biblio/Makefile.biblio.lib
patching file c++/src/objects/blastdb/Makefile.blastdb.lib
patching file c++/src/objects/general/Makefile.general.lib
patching file c++/src/objects/genomecoll/Makefile.genome_collection.lib
patching file c++/src/objects/id1/Makefile.id1.lib
patching file c++/src/objects/id2/Makefile.id2.lib
patching file c++/src/objects/medline/Makefile.medline.lib
patching file c++/src/objects/pub/Makefile.pub.lib
patching file c++/src/objects/seq/Makefile.seq.lib
patching file c++/src/objects/seqcode/Makefile.seqcode.lib
patching file c++/src/objects/seqset/Makefile.seqset.lib
patching file c++/src/objects/seqsplit/Makefile.seqsplit.lib
patching file c++/src/serial/Makefile.serial.lib
patching file c++/src/util/Makefile.util.lib
patching file c++/src/util/xregexp/Makefile.xregexp.lib
patching file c++/src/algo/segmask/Makefile.xalgosegmask.lib
patching file c++/src/objmgr/split/Makefile.id2_split.lib
patching file c++/src/objtools/blast/seqdb_writer/Makefile.writedb.lib
patching file c++/src/algo/blast/Makefile.blast_macros.mk
patching file c++/src/algo/blast/dbindex/makeindex/Makefile.makeindex.app
Applying patch no_multiarch_rpath
patching file c++/src/build-system/configure
patching file c++/src/build-system/configure.ac
Applying patch use_pie_for_apps
patching file c++/src/build-system/Makefile.app.in
Applying patch skip_services_unit_test
patching file c++/src/objtools/blast/services/unit_test/Makefile.blast_services_unit_test.app
Now at patch skip_services_unit_test
debian/rules override_dh_auto_configure
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \
CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug
configure: loading site script ./src/build-system/config.site
configure: creating cache config.cache
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configure: looking for configurables below /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++...
configure: ...done
updating cache config.cache
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config.status: executing default commands
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib/ncbicfg.c is updated
Platform not defined for Linux armv7l -- please fix me
project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/3.8.5/project_tree_builder
Will build project_tree_builder locally
**********************************************************************
Building project_tree_builder
**********************************************************************
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[3] (Makefile.precompile): Nothing to be done for `all'.
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[2] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[2] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[2] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib TMPL=corelib -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/blob_storage.cpp -o blob_storage.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/blob_storage.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/blob_storage.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ddumpable.cpp -o ddumpable.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ddumpable.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ddumpable.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/env_reg.cpp -o env_reg.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/env_reg.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/metareg.cpp -o metareg.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/metareg.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_config.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_param.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_process.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_safe_static.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_signal.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_signal.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_stack.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_system.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiapp.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiargs.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiatomic.cpp:45:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include ncbicfg.c -o ncbicfg.o
ncbicfg.c:61:1: warning: string length '977' is greater than the length '509' ISO C90 compilers are required to support [-Woverlength-strings]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidbg.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:779:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbidiag.hpp:1735) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:1662:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:881) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In member function 'std::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:1725:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:881) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:1750:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:881) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:1782:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:881) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag.cpp:2727:44: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:339) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag_p.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidiag_p.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidll.cpp -o ncbidll.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbidll.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbidll.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbienv.cpp -o ncbienv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbienv.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiexec.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiexec.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiexpt.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbifile.cpp -o ncbifile.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbifile.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimempool.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbimempool.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbimtx.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbiobj.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbireg.cpp -o ncbireg.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbireg.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbistr.cpp -o ncbistr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbistr.cpp:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbistre.cpp -o ncbistre.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbistre.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbithr.cpp -o ncbithr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbithr.cpp:45:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbitime.cpp -o ncbitime.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbitime.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/obj_store.cpp -o obj_store.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/obj_store.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/obj_store.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/plugin_manager.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/plugin_manager_store.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/stream_utils.cpp -o stream_utils.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/stream_utils.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/syslog.cpp -o syslog.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/syslog.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/syslog.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/version.cpp -o version.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/version.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/request_ctx.cpp -o request_ctx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/request_ctx.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/request_control.cpp -o request_control.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/request_control.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/expr.cpp -o expr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/expr.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/expr.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/resource_info.cpp -o resource_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/resource_info.hpp:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/resource_info.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/interprocess_lock.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_autoinit.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/perf_log.cpp -o perf_log.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/perf_log.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/perf_log.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbi_toolkit.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbierror.cpp -o ncbierror.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/ncbierror.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxncbi.so .libxncbi.so.stamp
/usr/bin/g++ -shared -o libxncbi.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxncbi.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxncbi.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxncbi.so
ln -f .xncbi.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xncbi.dep
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib TMPL=test_mt -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/test_mt.cpp -o test_mt.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_mt.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/test_mt.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libtest_mt.so .libtest_mt.so.stamp
/usr/bin/g++ -shared -o libtest_mt.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O test_mt.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libtest_mt.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libtest_mt.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libtest_mt.so
ln -f .test_mt.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.test_mt.dep
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib TMPL=test_boost -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/test_boost.cpp -o test_boost.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/corelib/test_boost.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccoSD3aV.s: Assembler messages:
/tmp/ccoSD3aV.s:15136: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:15146: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:15163: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19328: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19338: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19355: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19412: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19422: Warning: swp{b} use is deprecated for this architecture
/tmp/ccoSD3aV.s:19439: Warning: swp{b} use is deprecated for this architecture
/bin/rm -f libtest_boost.so .libtest_boost.so.stamp
/usr/bin/g++ -shared -o libtest_boost.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O test_boost.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libtest_boost.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libtest_boost.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libtest_boost.so
ln -f .test_boost.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.test_boost.dep
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util TMPL=util -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/random_gen.cpp -o random_gen.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/random_gen.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/random_gen.cpp:75:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/utf8.cpp -o utf8.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/utf8.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/utf8.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/checksum.cpp -o checksum.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/checksum.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/bytesrc.cpp -o bytesrc.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/bytesrc.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/strbuffer.cpp -o strbuffer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/strbuffer.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/strbuffer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/itree.cpp -o itree.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/itree.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/smalldns.cpp -o smalldns.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/smalldns.cpp:34:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_old.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_old.cpp: In member function 'virtual void ncbi::CStdPoolOfThreads::KillAllThreads(ncbi::CStdPoolOfThreads::TKillFlags)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_old.cpp:63:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_old.cpp:66:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ddump_viewer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/strsearch.cpp -o strsearch.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/strsearch.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/logrotate.cpp -o logrotate.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/logrotate.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/logrotate.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/format_guess.cpp -o format_guess.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/format_guess.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/format_guess.cpp: In member function 'bool ncbi::CFormatGuess::x_TestTableDelimiter(const string&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/format_guess.cpp:1078:25: warning: variable 'merge_delims' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ascii85.cpp -o ascii85.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/ascii85.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ascii85.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/md5.cpp -o md5.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/md5.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/md5.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/file_obsolete.cpp -o file_obsolete.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/file_obsolete.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/file_obsolete.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/unicode.cpp -o unicode.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/unicode.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/dictionary.cpp -o dictionary.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/dictionary.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/dictionary.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/dictionary_util.cpp -o dictionary_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/static_map.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/dictionary_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_nonstop.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_nonstop.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sgml_entity.cpp -o sgml_entity.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/sgml_entity.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sgml_entity.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/static_set.cpp -o static_set.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/static_set.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/transmissionrw.cpp -o transmissionrw.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/transmissionrw.cpp:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/miscmath.c -o miscmath.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/mutex_pool.cpp -o mutex_pool.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/mutex_pool.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/mutex_pool.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/ncbi_cache.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ncbi_cache.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/line_reader.cpp -o line_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/line_reader.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/util_exception.cpp -o util_exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/ncbi_table.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/util_exception.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/uttp.cpp -o uttp.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/multi_writer.cpp -o multi_writer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/multi_writer.cpp:32:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/itransaction.cpp -o itransaction.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/itransaction.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/itransaction.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool.cpp -o thread_pool.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/thread_pool_ctrl.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/thread_pool_ctrl.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/scheduler.cpp -o scheduler.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/scheduler.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/distribution.cpp -o distribution.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/random_gen.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/distribution.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/distribution.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/util_misc.cpp -o util_misc.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/util_misc.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ncbi_url.cpp -o ncbi_url.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/ncbi_url.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxutil.so .libxutil.so.stamp
/usr/bin/g++ -shared -o libxutil.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o util_misc.o ncbi_url.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxutil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxutil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxutil.so
ln -f .xutil.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xutil.dep
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/regexp'
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
/usr/bin/make[2] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp TMPL=xregexp -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/regexp.cpp -o regexp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/xregexp/regexp.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/regexp.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/xregexp/arg_regexp.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/arg_regexp.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/xregexp/mask_regexp.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/xregexp/mask_regexp.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxregexp.so .libxregexp.so.stamp
/usr/bin/g++ -shared -o libxregexp.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxregexp.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxregexp.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxregexp.so
ln -f .xregexp.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xregexp.dep
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/file_contents.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_configure.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_configure.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_makefile.hpp:31,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_makefile.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_project_context.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_site.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_builder_app.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree_builder.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_src_resolver.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_utils.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/resolver.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_projects.cpp -o proj_projects.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_projects.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_projects.cpp:30:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/configurable_file.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/configurable_file.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_gui.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/mac_prj_generator.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder/prj_file_collector.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -lm -lpthread -o project_tree_builder
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f project_tree_builder /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f project_tree_builder /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/project_tree_builder
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
**********************************************************************
Running project_tree_builder. Please wait.
**********************************************************************
./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ src Makefile.flat
Done
===============================================================================
NCBI C++ Toolkit documentation: doc/index.html, doc/config.html#ref_Running
For the available configuration flags run: ./configure --help
CFLAGS = -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC
CXXFLAGS = -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS = -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O
LIBRARIES: build as dynamic by default
FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux
PACKAGES:
enabled: Z BZ2 PCRE Boost.Spirit Boost.Test.Included
disabled: UUID FUSE LocalZ LocalBZ2 LZO LocalPCRE GCRYPT GNUTLS OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON23 PYTHON24 PYTHON25 PERL Boost.Regex Boost.System Boost.Test Boost.Threads C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF UNGIF GIF XPM FreeType FTGL MAGIC MIMETIC
PROJECTS:
enabled: cgi local_lbsm connext ncbi_crypt serial objects app algo
disabled: bdb dbapi ctools gui gbench
Tools / flags / paths: /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.mk
Configuration header: /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc/ncbiconf_unix.h
To build everything: cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build && make all_r
or simply run make in the current directory
Alternatively, cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build && make -f Makefile.flat
******* CONFIGURATION SUCCESSFUL *******
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
debian/rules override_dh_auto_build
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
cd c++/BUILD/build && \
make -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/"
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
/usr/bin/make -w -f Makefile.flat ptb_all.real MTARGET=
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
cd corelib/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'.
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
cd corelib/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
cd util/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
cd util/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
cd serial/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
cd serial/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial TMPL=serial -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/hookdata.cpp -o hookdata.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/hookdata.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/hookdatakey.cpp -o hookdatakey.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/hookdatakey.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typeinfo.cpp -o typeinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typeinfo.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectinfo.cpp -o objectinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectinfo.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectiter.cpp -o objectiter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectiter.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectio.cpp -o objectio.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objectio.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typeref.cpp -o typeref.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typeref.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typemap.cpp -o typemap.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/typemap.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stdtypes.cpp -o stdtypes.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stdtypes.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypesimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stdtypes.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stdtypes.cpp:1631:36: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/enumerated.cpp -o enumerated.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/enumerated.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/ptrinfo.cpp -o ptrinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/ptrinfo.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/autoptrinfo.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/continfo.cpp -o continfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/continfo.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stltypes.cpp -o stltypes.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stltypesimpl.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/stltypes.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/memberid.cpp -o memberid.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/memberid.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/memberlist.cpp -o memberlist.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/memberlist.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/item.cpp -o item.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/item.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/classinfob.cpp -o classinfob.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/classinfob.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/member.cpp -o member.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/member.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/classinfo.cpp -o classinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/classinfo.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/variant.cpp -o variant.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/variant.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/choice.cpp -o choice.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/classinfob.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/choice.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/choice.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/choiceptr.cpp -o choiceptr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/choiceptr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/aliasinfo.cpp -o aliasinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/aliasinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/aliasinfo.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistr.cpp -o objistr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistr.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:46:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistr.cpp:46:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h: In member function 'unsigned int bm::deserializer<BV, DEC>::deserialize(bm::deserializer<BV, DEC>::bvector_type&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, DEC = bm::decoder, bm::deserializer<BV, DEC>::bvector_type = bm::bvector<>, bm::word_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1163:56: instantiated from 'unsigned int bm::deserialize(BV&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, bm::word_t = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistr.cpp:1802:76: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1475:20: warning: variable 'glevels' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h: In member function 'unsigned int bm::deserializer<BV, DEC>::deserialize(bm::deserializer<BV, DEC>::bvector_type&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, DEC = bm::decoder_little_endian, bm::deserializer<BV, DEC>::bvector_type = bm::bvector<>, bm::word_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1175:56: instantiated from 'unsigned int bm::deserialize(BV&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, bm::word_t = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistr.cpp:1802:76: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1475:20: warning: variable 'glevels' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostr.cpp -o objostr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostr.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objcopy.cpp -o objcopy.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objcopy.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/iterator.cpp -o iterator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/iterator.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serial.cpp -o serial.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serial.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/delaybuf.cpp -o delaybuf.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/delaybuf.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/pack_string.cpp -o pack_string.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/exception.cpp -o exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/exception.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/exception.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objhook.cpp -o objhook.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objhook.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objlist.cpp -o objlist.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objlist.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objstack.cpp -o objstack.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objstack.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasn.cpp -o objostrasn.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasn.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostrasn.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasn.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasn.cpp:328:16: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrasn.cpp -o objistrasn.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrasn.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasnb.cpp -o objostrasnb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasnb.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostrasnb.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasnb.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrasnb.cpp:487:16: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrasnb.cpp -o objistrasnb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrasnb.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrxml.cpp -o objostrxml.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrxml.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostr.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objostrxml.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrxml.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrxml.cpp:798:16: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrxml.cpp -o objistrxml.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrxml.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrxml.cpp: In member function 'virtual std::string ncbi::CObjectIStreamXml::ReadFileHeader()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrxml.cpp:527:33: warning: variable 'docType' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrjson.cpp -o objostrjson.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objostrjson.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrjson.cpp -o objistrjson.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrjson.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/objecttype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objhook.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objistr.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objistrjson.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrjson.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/objistrjson.cpp:515:16: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serializable.cpp -o serializable.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serializable.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serializable.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serialobject.cpp -o serialobject.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/serialobject.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/pathhook.cpp -o pathhook.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/pathhook.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/pathhook.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxser.so .libxser.so.stamp
/usr/bin/g++ -shared -o libxser.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxser.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxser.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxser.so
ln -f .xser.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xser.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
cd serial/datatool/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
cd serial/datatool/ && /usr/bin/make -w APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool TMPL=datatool -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/datatool.cpp -o datatool.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/type.cpp -o type.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/namespace.cpp -o namespace.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/namespace.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/statictype.cpp -o statictype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumtype.cpp -o enumtype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumtype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumtype.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/reftype.cpp -o reftype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/unitype.cpp -o unitype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/blocktype.cpp -o blocktype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choicetype.cpp -o choicetype.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.cpp -o typestr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/ptrstr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/ptrstr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/stdstr.cpp -o stdstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/stdstr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/stdstr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/classstr.cpp -o classstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumstr.cpp -o enumstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumstr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/enumstr.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/stlstr.cpp -o stlstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choicestr.cpp -o choicestr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/choiceptrstr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/value.cpp -o value.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/value.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/value.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/mcontainer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/mcontainer.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/module.cpp -o module.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/moduleset.cpp -o moduleset.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/generate.cpp -o generate.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/filecode.cpp -o filecode.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/code.cpp -o code.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/code.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/code.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/fileutil.cpp -o fileutil.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/fileutil.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/fileutil.cpp: In member function 'bool ncbi::CDelayedOfstream::equals()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/fileutil.cpp:465:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.cpp -o alexer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/aparser.cpp -o aparser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/parser.cpp -o parser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/parser.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/parser.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/lexer.cpp -o lexer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/lexer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/lexer.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.cpp -o exceptions.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/comments.cpp -o comments.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/comments.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/srcutil.cpp -o srcutil.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/srcutil.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdaux.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdaux.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdlexer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdlexer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdllexer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdllexer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_pattern_match_callback.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_pattern_match_callback.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_code_generator.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_node.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_merger.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_merger.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/aliasstr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_node.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_spec_file_parser.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/serial/datatool/traversal_spec_file_parser.cpp:187:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f datatool /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f datatool /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
cd objects/general/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh general all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general'
/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
cd objects/general/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general TMPL=general -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general__.cpp -o general__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general___.cpp -o general___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp -o uoconv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:46:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h: In member function 'unsigned int bm::deserializer<BV, DEC>::deserialize(bm::deserializer<BV, DEC>::bvector_type&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, DEC = bm::decoder, bm::deserializer<BV, DEC>::bvector_type = bm::bvector<>, bm::word_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1163:56: instantiated from 'unsigned int bm::deserialize(BV&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, bm::word_t = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:96:71: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1475:20: warning: variable 'glevels' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h: In member function 'unsigned int bm::deserializer<BV, DEC>::deserialize(bm::deserializer<BV, DEC>::bvector_type&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, DEC = bm::decoder_little_endian, bm::deserializer<BV, DEC>::bvector_type = bm::bvector<>, bm::word_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1175:56: instantiated from 'unsigned int bm::deserialize(BV&, const unsigned char*, bm::word_t*) [with BV = bm::bvector<>, bm::word_t = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:96:71: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmserial.h:1475:20: warning: variable 'glevels' set but not used [-Wunused-but-set-variable]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/stdtypes.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objectinfo.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/uoconv.cpp:187:20: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/bin/rm -f libgeneral.so .libgeneral.so.stamp
/usr/bin/g++ -shared -o libgeneral.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O general__.o general___.o uoconv.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libgeneral.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libgeneral.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libgeneral.so
ln -f .general.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.general.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
cd objects/biblio/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh biblio all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio'
/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
cd objects/biblio/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio TMPL=biblio -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio__.cpp -o biblio__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio___.cpp -o biblio___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/citation_base.cpp -o citation_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/biblio/citation_base.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/citation_base.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libbiblio.so .libbiblio.so.stamp
/usr/bin/g++ -shared -o libbiblio.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O biblio__.o biblio___.o citation_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libbiblio.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libbiblio.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libbiblio.so
ln -f .biblio.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.biblio.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/compo_heap.c:142:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/redo_alignment.c:184:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/redo_alignment.c:199:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o
/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp
/usr/bin/g++ -shared -o libcomposition_adjustment.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libcomposition_adjustment.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libcomposition_adjustment.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libcomposition_adjustment.so
ln -f .composition_adjustment.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.composition_adjustment.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
cd util/tables/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
cd util/tables/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/tables TMPL=tables -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o
/bin/rm -f libtables.so .libtables.so.stamp
/usr/bin/g++ -shared -o libtables.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O raw_scoremat.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libtables.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libtables.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libtables.so
ln -f .tables.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.tables.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
cd connect/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
cd connect/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect TMPL=xconnect -w all
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/.#lock-map.
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_lbsm.c -o ncbi_lbsm.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_lbsm_ipc.c -o ncbi_lbsm_ipc.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_types.c -o ncbi_types.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_priv.c -o ncbi_priv.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_core.c -o ncbi_core.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_util.c -o ncbi_util.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c -o ncbi_socket.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c: In function 's_DoLog':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:493:25: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:496:25: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:519:21: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:525:21: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:528:21: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket.c:534:21: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_connection.c -o ncbi_connection.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_connector.c -o ncbi_connector.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c:40:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_http_connector.h:121:34: warning: comma at end of enumerator list [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c:996:32: warning: ISO C90 does not support the 'll' gnu_scanf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c: In function 's_Read':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c:1201:13: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_http_connector.c:1201:13: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_service.c -o ncbi_service.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_dispd.c:39:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_http_connector.h:121:34: warning: comma at end of enumerator list [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_service_connector.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_service_connector.c:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_http_connector.h:121:34: warning: comma at end of enumerator list [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:204:17: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:204:17: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:222:17: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:222:17: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:1076:9: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPRestart':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:1420:5: warning: ISO C90 does not support the 'll' gnu_scanf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPSzcb':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:1454:24: warning: ISO C90 does not support the 'll' gnu_scanf length modifier [-Wformat]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCompleteUpload':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_ftp_connector.c:1773:17: warning: ISO C90 does not support the 'll' gnu_printf length modifier [-Wformat]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_lb.c -o ncbi_lb.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_local.c -o ncbi_local.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_base64.c -o ncbi_base64.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_base64.c:245:5: warning: string length '2048' is greater than the length '509' ISO C90 compilers are required to support [-Woverlength-strings]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_version.c -o ncbi_version.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_socket_unix.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_socket_cxx.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_core_cxx.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/email_diag_handler.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/email_diag_handler.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_streambuf.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_stream.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_namedpipe.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_namedpipe_connector.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_pipe.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_pipe.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_pipe.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_pipe_connector.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_pipe_connector.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_core_cxx.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_conn_reader_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_conn_reader_writer.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ncbi_userhost.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxconnect.so .libxconnect.so.stamp
/usr/bin/g++ -shared -o libxconnect.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_lbsmd.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lnsl -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxconnect.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxconnect.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxconnect.so
ln -f .xconnect.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xconnect.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
cd algo/blast/core/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
cd algo/blast/core/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core TMPL=blast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/aa_ungapped.h:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/aa_ungapped.h:36:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:489:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:496:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:742:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/aa_ungapped.c:749:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_engine.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:61:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_engine.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:61:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c: In function 's_BlastSearchEngineCore':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:636:5: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:636:5: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:1144:9: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:1261:22: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_engine.c:1336:10: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_extend.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_extend.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_filter.c:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_filter.c:37:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_filter.c:300:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_filter.c:300:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_gapalign.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_gapalign.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c:44:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c: In function 'BLAST_GreedyGappedAlignment':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c:2694:7: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_gapalign.c:2694:7: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:44:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c: In function 's_CutOffGapEditScript':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:2190:4: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:2190:4: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c: In function 'Blast_HSPResultsFromHSPStreamWithLimitEx':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:3511:13: warning: variable 'rm_hsps' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c: At top level:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hits.c:3224:12: warning: 's_SortHspWrapEvalue' defined but not used [-Wunused-function]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspstream.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hspstream.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspstream.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_hspstream.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c:39:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c: In function 'BlastIntervalTreeAddHSP':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c:669:13: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.c:669:13: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_kappa.c:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_kappa.c:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_kappa.c:46:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_aalookup.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aalookup.c:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/lookup_wrap.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_aascan.h:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c:572:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c:575:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_aascan.c:580:33: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_nalookup.h:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nalookup.c:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nalookup.c:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_nalookup.h:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c: In function 's_BlastNaScanSubject_8_4':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:110:10: warning: variable 'lut_word_length' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:298:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:300:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1341:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1350:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1352:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1356:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1361:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1367:33: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1371:33: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1375:33: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:1379:33: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2585:24: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2587:39: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2589:39: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2591:39: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2599:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2601:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2603:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2608:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2610:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2612:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2614:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2620:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2623:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2626:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2629:43: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2640:39: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2659:16: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2662:16: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_nascan.c:2664:12: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_message.c -o blast_message.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c -o blast_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:40:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:41:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspfilter.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_collector.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:44:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:45:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:79:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:79:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c: In function 's_MergeWindowMaskerOptions':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:352:9: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_options.c:352:9: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_psi.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.h:56,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi.c:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/na_ungapped.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_extend.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/na_ungapped.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:469:15: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1584:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1585:18: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1597:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1598:18: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1605:19: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1606:18: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1619:23: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1685:9: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1687:25: warning: ISO C forbids conversion of object pointer to function pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1757:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1761:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1764:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1766:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1770:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1774:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1778:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1780:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1784:40: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1788:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1791:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/na_ungapped.c:1793:36: warning: ISO C forbids conversion of function pointer to object pointer type [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_psi.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.h:56,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.c:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.c: In function '_PSIValidateCdMSA':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.c:877:5: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.c:877:5: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_seg.c:44:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_seg.c:44:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_setup.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_setup.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c:42:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c: In function 'BLAST_CalcEffLengths':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c:766:11: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_setup.c:766:11: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_psi.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.h:56,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:58:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:587:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:587:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c: In function 's_BlastGumbelBlkNew':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:818:21: warning: unused variable 'retv' [-Wunused-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c: At top level:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:5081:15: warning: 's_CalculateNormalProbability' defined but not used [-Wunused-function]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c: In function 'BLAST_SpougeEtoS':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_stat.c:5205:12: warning: 'a' may be used uninitialized in this function [-Wuninitialized]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_traceback.h:40:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c:56:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_traceback.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c:56:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c:68:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_itree.h:167:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c: In function 'Blast_TracebackFromHSPList':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c:359:25: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_traceback.c:359:25: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c -o blast_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:43:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c:41:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c: In function 'BlastSeqBlkSetSeqRanges':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c:203:9: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_util.c:203:9: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_collector.h:40:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_collector.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspfilter.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_collector.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_collector.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:40:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_besthit.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspfilter.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_besthit.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_besthit.c:41:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:79:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_besthit.h:79:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_culling.h:47:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c:48:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hspfilter.h:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/hspfilter_culling.h:48,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c:48:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c:51:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c:51:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/hspfilter_culling.c:224:11: warning: comma at end of enumerator list [-pedantic]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/link_hsps.h:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/link_hsps.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/link_hsps.h:40:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/link_hsps.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/lookup_wrap.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/lookup_wrap.c:43:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/lookup_wrap.c:47:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_filter.h:307:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_psi.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.h:56,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/matrix_freq_ratios.c:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/pattern.c -o pattern.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/lookup_wrap.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/phi_lookup.h:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_extend.c:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_hits.h:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/phi_extend.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_extend.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/phi_gapalign.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_gapalign.c:61:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/phi_gapalign.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_gapalign.c:61:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/lookup_wrap.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/phi_lookup.h:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/phi_lookup.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c:36:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c: In function 'BlastHitSavingParametersNew':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c:763:4: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_parameters.c:763:4: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_psi.h:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_psi_priv.h:56,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_posit.c:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_program.c -o blast_program.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:55:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_sw.h:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_sw.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_options.h:213:1: warning: (this will be reported only once per input file) [enabled by default]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_sw.h:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_sw.c:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/core/blast_parameters.h:433:1: warning: (this will be reported only once per input file) [enabled by default]
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/split_query.c -o split_query.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o
/bin/rm -f libblast.so .libblast.so.stamp
/usr/bin/g++ -shared -o libblast.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblast.so
ln -f .blast.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blast.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
cd objects/medline/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh medline all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline'
/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
cd objects/medline/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline TMPL=medline -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline__.cpp -o medline__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline___.cpp -o medline___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libmedline.so .libmedline.so.stamp
/usr/bin/g++ -shared -o libmedline.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O medline__.o medline___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libmedline.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libmedline.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libmedline.so
ln -f .medline.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.medline.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
cd objects/pub/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh pub all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub'
/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
cd objects/pub/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub TMPL=pub -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub__.cpp -o pub__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub___.cpp -o pub___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libpub.so .libpub.so.stamp
/usr/bin/g++ -shared -o libpub.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O pub__.o pub___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libpub.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libpub.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libpub.so
ln -f .pub.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.pub.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
cd objects/seqcode/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh seqcode all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode'
/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
cd objects/seqcode/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode TMPL=seqcode -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqcode.so .libseqcode.so.stamp
/usr/bin/g++ -shared -o libseqcode.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seqcode__.o seqcode___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqcode.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqcode.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqcode.so
ln -f .seqcode.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqcode.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
cd util/sequtil/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
cd util/sequtil/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil TMPL=sequtil -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil.cpp -o sequtil.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp: In static member function 'static ncbi::SIZE_TYPE ncbi::CSeqConvert_imp::x_Convert4naTo2na(const char*, ncbi::TSeqPos, ncbi::TSeqPos, char*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp:702:25: warning: suggest parentheses around arithmetic in operand of '|' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp:730:25: warning: suggest parentheses around arithmetic in operand of '|' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_convert_imp.cpp:736:25: warning: suggest parentheses around arithmetic in operand of '|' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_manip.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/sequtil/sequtil.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_tables.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_tables.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/sequtil/sequtil_shared.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libsequtil.so .libsequtil.so.stamp
/usr/bin/g++ -shared -o libsequtil.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libsequtil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libsequtil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libsequtil.so
ln -f .sequtil.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.sequtil.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
cd objects/seq/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -w all
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
status=0 ; \
for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \
d=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../$x ; \
(cd $d && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh) || status=9 ; \
test -f ${x}__.cpp || \
echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \
test -f ${x}___.cpp || \
echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \
done ; \
exit $status
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqblock'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqblock'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqres'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqres'
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqtable'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.7.0
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqtable'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh seq all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq'
/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
cd objects/seq/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq TMPL=seq -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq__.cpp -o seq__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqalign__.cpp -o seqalign__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Seq_align.cpp:1360:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Std_seg.hpp:79) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Seq_align.cpp:1369:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Seq_align.cpp:1343) [-Wdeprecated-declarations]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/seqalign__.cpp:17:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Spliced_seg.cpp: In member function 'void ncbi::objects::CSpliced_seg::Validate(bool) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Spliced_seg.cpp:183:14: warning: variable 'genomic_plus' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqblock__.cpp -o seqblock__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqfeat__.cpp -o seqfeat__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:25:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/OrgMod.cpp: In function 'void ncbi::objects::s_ProcessInstitutionCollectionCodeLine(const ncbi::CTempString&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/OrgMod.cpp:154:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static void ncbi::objects::CSubSource::IsCorrectLatLonFormat(std::string, bool&, bool&, bool&, bool&, double&, double&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/SubSource.cpp:492:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/SubSource.cpp: In function 'std::string ncbi::objects::s_GetNumFromLatLonToken(std::string)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/SubSource.cpp:692:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/SubSource.cpp:695:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqloc__.cpp -o seqloc__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqres__.cpp -o seqres__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqtable__.cpp -o seqtable__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqtable/CommonBytes_table_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqtable/CommonBytes_table.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqtable/CommonBytes_table.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq___.cpp -o seq___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqalign___.cpp -o seqalign___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqblock___.cpp -o seqblock___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqfeat___.cpp -o seqfeat___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqloc___.cpp -o seqloc___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqres___.cpp -o seqres___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include seqtable___.cpp -o seqtable___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqtable/CommonBytes_table_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_tree.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_handle.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_mapper.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqfeat/SeqFeatData.hpp:75,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_from_string.cpp:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseq.so .libseq.so.stamp
/usr/bin/g++ -shared -o libseq.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseq.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseq.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseq.so
ln -f .seq.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seq.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
cd objects/blastdb/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh blastdb all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb'
/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
cd objects/blastdb/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb TMPL=blastdb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblastdb.so .libblastdb.so.stamp
/usr/bin/g++ -shared -o libblastdb.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blastdb__.o blastdb___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblastdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblastdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblastdb.so
ln -f .blastdb.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blastdb.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
cd util/creaders/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
/usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
cd util/creaders/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders TMPL=creaders -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders/alnread.c -o alnread.o
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders/alnread.c:51:20: warning: comma at end of enumerator list [-pedantic]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders/alnread.c: In function 's_AfrpProcessFastaGap':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders/alnread.c:3557:1: warning: C++ style comments are not allowed in ISO C90 [enabled by default]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/creaders/alnread.c:3557:1: warning: (this will be reported only once per input file) [enabled by default]
/bin/rm -f libcreaders.so .libcreaders.so.stamp
/usr/bin/g++ -shared -o libcreaders.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O alnread.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libcreaders.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libcreaders.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libcreaders.so
ln -f .creaders.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.creaders.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
cd objects/genomecoll/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh genome_collection all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh gencoll_client all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll'
/usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
cd objects/genomecoll/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll TMPL=genome_collection -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp
/usr/bin/g++ -shared -o libgenome_collection.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O genome_collection__.o genome_collection___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libgenome_collection.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libgenome_collection.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libgenome_collection.so
ln -f .genome_collection.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.genome_collection.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
cd objects/seqset/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh seqset all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/medline/medline.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset'
/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
cd objects/seqset/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset TMPL=seqset -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset__.cpp -o seqset__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/Bioseq_set.cpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset___.cpp -o seqset___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqset.so .libseqset.so.stamp
/usr/bin/g++ -shared -o libseqset.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seqset__.o seqset___.o gb_release_file.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqset.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqset.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqset.so
ln -f .seqset.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqset.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
cd objects/scoremat/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh scoremat all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat'
/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
cd objects/scoremat/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat TMPL=scoremat -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libscoremat.so .libscoremat.so.stamp
/usr/bin/g++ -shared -o libscoremat.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O scoremat__.o scoremat___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libscoremat.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libscoremat.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libscoremat.so
ln -f .scoremat.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.scoremat.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
cd objects/seqedit/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh seqedit all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit'
/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
cd objects/seqedit/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit TMPL=seqedit -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqedit.so .libseqedit.so.stamp
/usr/bin/g++ -shared -o libseqedit.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seqedit__.o seqedit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqedit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqedit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqedit.so
ln -f .seqedit.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqedit.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
cd objects/seqsplit/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh seqsplit all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit'
/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
cd objects/seqsplit/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit TMPL=seqsplit -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqsplit.so .libseqsplit.so.stamp
/usr/bin/g++ -shared -o libseqsplit.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seqsplit__.o seqsplit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqsplit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqsplit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqsplit.so
ln -f .seqsplit.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqsplit.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
cd objmgr/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
cd objmgr/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr TMPL=objmgr -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/table_field.cpp -o table_field.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/snp_annot_info.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_types_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_loc_cvt.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_selector.cpp -o annot_selector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_name.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_selector.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_descr_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_descr.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/feat_ci.cpp -o feat_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/feat_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/graph_ci.cpp -o graph_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_types_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_object.cpp -o annot_object.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_object_index.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_ci.cpp -o annot_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_types_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_info.cpp -o tse_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_source.cpp -o data_source.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/priority.cpp -o priority.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/priority.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/priority.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/prefetch_impl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_manager.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/prefetch_manager_impl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_manager_impl.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/prefetch_manager.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/prefetch_actions.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope.cpp -o scope.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/heap_scope.cpp -o heap_scope.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/heap_scope.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/heap_scope.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_impl.cpp -o scope_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_info.cpp -o scope_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/scope_info.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_handle.cpp -o tse_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/tse_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map.cpp -o seq_map.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_entry_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_annot_ci.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/annot_types_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_entry_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_set_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_annot_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/align_ci.cpp -o align_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/align_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_loader.cpp -o data_loader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/data_loader.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/handle_range.cpp -o handle_range.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/objmgr_exception.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/object_manager.cpp -o object_manager.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/object_manager.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_vector.cpp -o seq_vector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_descr_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_descr.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_split_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_chunk_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_ci.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_type_index.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_loc_mapper.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_collector.cpp -o annot_collector.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/data_loader_factory.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/mapped_feat.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_feat_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_graph_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_align_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/scope_impl.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/edit_commands_impl.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/bioseq_edit_commands.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edit_saver.cpp -o edit_saver.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/edit_saver.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/unsupp_editsaver.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/edits_db_engine.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edits_db_engine.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/edits_db_saver.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_finder.cpp -o annot_finder.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/impl/annot_finder.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/annot_finder.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp
/usr/bin/g++ -shared -o libxobjmgr.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxobjmgr.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxobjmgr.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxobjmgr.so
ln -f .xobjmgr.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xobjmgr.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:50:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:51,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvol.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:39:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'int ncbi::CSeqDBIsam::x_DiffCharLease(const string&, ncbi::CSeqDBMemLease&, const string&, ncbi::CSeqDBIsam::TIndx, Uint4, ncbi::CSeqDBIsam::TIndx, bool, ncbi::CSeqDBLockHold&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:450:9: warning: variable 'result' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector<std::basic_string<char> >&, std::vector<std::basic_string<char> >&, std::vector<long long int>&, ncbi::CSeqDBLockHold&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:943:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqdb.so .libseqdb.so.stamp
/usr/bin/g++ -shared -o libseqdb.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqdb.so
ln -f .seqdb.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqdb.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objects/submit/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh submit all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit'
/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
cd objects/submit/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit TMPL=submit -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/submit__.cpp -o submit__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/submit___.cpp -o submit___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libsubmit.so .libsubmit.so.stamp
/usr/bin/g++ -shared -o libsubmit.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O submit__.o submit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libsubmit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libsubmit.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libsubmit.so
ln -f .submit.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.submit.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
cd objtools/readers/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
cd objtools/readers/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers TMPL=xobjread -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/read_util.cpp -o read_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp: In member function 'bool ncbi::CFormatGuessEx::x_TryRmo()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp:227:50: warning: 'static ncbi::objects::CRmReader* ncbi::objects::CRmReader::OpenReader(ncbi::CNcbiIstream&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/rm_reader.hpp:750) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp:228:32: warning: 'void ncbi::objects::CRmReader::Read(ncbi::CRef<ncbi::objects::CSeq_annot>, ncbi::objects::IRmReaderFlags::TFlags, size_t)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/rm_reader.hpp:752) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp:229:35: warning: 'static void ncbi::objects::CRmReader::CloseReader(ncbi::objects::CRmReader*)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/rm_reader.hpp:751) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp: In member function 'bool ncbi::CFormatGuessEx::x_TryAgp()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/format_guess_ex.cpp:244:39: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_read.hpp:51) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/acc_pattern.cpp:43:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp -o agp_read.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_read.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef<ncbi::objects::CBioseq_set> ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_read.hpp:60) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_read.hpp:51) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp -o agp_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpRow::FromString(const string&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:351:56: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:353:56: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:357:58: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpRow::ParseComponentCols(bool)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:470:62: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:474:62: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpRow::ParseGapCols(bool)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_util.cpp:541:56: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:200) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/agp_validate_reader.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_validate_reader.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'void ncbi::CAgpValidateReader::x_PrintTotals(ncbi::CNcbiOstream&, bool)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_validate_reader.cpp:889:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/agp_validate_reader.cpp:894:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/cigar.cpp -o cigar.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta.cpp -o fasta.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_entry> ncbi::objects::CFastaReader::ReadAlignedSet(int)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta.cpp:974:75: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta_aln_builder.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta_aln_builder.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/getfeature.cpp -o getfeature.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/getfeature.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/reader_data.cpp -o reader_data.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/reader_data.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/phrap.cpp -o phrap.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/phrap.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/reader_base.cpp -o reader_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/readfeat.cpp -o readfeat.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/wiggle_reader.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff3_sofa.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/vcf_reader.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/best_feat_finder.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/best_feat_finder.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/source_mod_parser.cpp: In member function 'void ncbi::objects::CSourceModParser::x_ApplyMods(ncbi::CAutoInitRef<ncbi::objects::CBioSource>&, ncbi::CTempString)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/source_mod_parser.cpp:594:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/readers/fasta_exception.cpp:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxobjread.so .libxobjread.so.stamp
/usr/bin/g++ -shared -o libxobjread.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o getfeature.o gff_reader.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lpub -lgeneral -lxser -lcreaders -lsequtil -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxobjread.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxobjread.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxobjread.so
ln -f .xobjread.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xobjread.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
cd objmgr/util/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
cd objmgr/util/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util TMPL=util -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/weight.cpp -o weight.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/sequence.cpp -o sequence.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/feature.cpp -o feature.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seqtitle.cpp: In function 'bool ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq&, std::string*, ncbi::objects::sequence::TGetTitleFlags)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seqtitle.cpp:672:16: warning: variable 'search_depth' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/create_defline.cpp -o create_defline.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxobjutil.so .libxobjutil.so.stamp
/usr/bin/g++ -shared -o libxobjutil.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O weight.o sequence.o feature.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxobjutil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxobjutil.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxobjutil.so
ln -f .xobjutil.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xobjutil.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
cd objtools/seqmasks_io/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
cd objtools/seqmasks_io/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp
/usr/bin/g++ -shared -o libseqmasks_io.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libseqmasks_io.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libseqmasks_io.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libseqmasks_io.so
ln -f .seqmasks_io.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.seqmasks_io.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
cd objects/variation/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh variation all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/general/general.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/pub/pub.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation'
/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
cd objects/variation/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation TMPL=variation -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/variation__.cpp -o variation__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/variation___.cpp -o variation___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libvariation.so .libvariation.so.stamp
/usr/bin/g++ -shared -o libvariation.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O variation__.o variation___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libvariation.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libvariation.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libvariation.so
ln -f .variation.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.variation.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
cd algo/blast/dbindex/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
cd algo/blast/dbindex/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/g++ -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/sequence.hpp:271) [-Wdeprecated-declarations]
/usr/bin/g++ -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp
/usr/bin/g++ -shared -o libxalgoblastdbindex.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxalgoblastdbindex.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxalgoblastdbindex.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxalgoblastdbindex.so
ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xalgoblastdbindex.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
cd algo/dustmask/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
cd algo/dustmask/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/dustmask TMPL=xalgodustmask -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/dustmask/symdust.cpp -o symdust.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/dustmask/symdust.hpp:45:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp
/usr/bin/g++ -shared -o libxalgodustmask.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O symdust.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxalgodustmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxalgodustmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxalgodustmask.so
ln -f .xalgodustmask.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xalgodustmask.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
cd algo/winmask/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
cd algo/winmask/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask TMPL=xalgowinmask -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_istat.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_util.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_pattern.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_factory.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_uset_simple.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_simple.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_istat_factory.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_factory.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_uset_array.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_array.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_bin.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:38:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt.cpp: In member function 'virtual void ncbi::CSeqMaskerOstatOpt::doFinalize()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:281:11: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_uset_hash.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_uset_hash.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:111:21: warning: 'unit_size' may be used uninitialized in this function [-Wuninitialized]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp: In member function 'virtual void ncbi::CSeqMaskerOstatOptBin::write_out(const ncbi::CSeqMaskerOstatOpt::params&) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:74:7: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_cache_boost.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_counts_converter.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/sequence.hpp:271) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/winmask/win_mask_config.hpp:41:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp
/usr/bin/g++ -shared -o libxalgowinmask.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxalgowinmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxalgowinmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxalgowinmask.so
ln -f .xalgowinmask.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xalgowinmask.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
cd objects/blast/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh blast all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
cd objects/blast/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast TMPL=blast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blast__.cpp -o blast__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Bla_com_opt_db_res_by_orga_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Bla_com_opt_db_res_by_orga.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/Bla_com_opt_db_res_by_orga.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blast___.cpp -o blast___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/Bla_com_opt_db_res_by_orga_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/names.cpp -o names.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxnetblast.so .libxnetblast.so.stamp
/usr/bin/g++ -shared -o libxnetblast.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blast__.o blast___.o names.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxnetblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxnetblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxnetblast.so
ln -f .xnetblast.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xnetblast.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
cd objects/blast/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `all'.
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast TMPL=xnetblastcli -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blastclient.cpp -o blastclient.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp
/usr/bin/g++ -shared -o libxnetblastcli.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blastclient.o blastclient_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxnetblastcli.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxnetblastcli.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxnetblastcli.so
ln -f .xnetblastcli.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xnetblastcli.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
cd algo/blast/api/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
cd algo/blast/api/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api TMPL=xblast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_cxx.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_local_priv.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_setup_cxx.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_seqalign.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp:98:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:165) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_options_handle.cpp:104:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/pssm_engine.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_blast.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/remote_blast.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_objmgr_tools.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/repeats_filter_cxx.cpp:44:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_mtlock.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psibl2seq.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_db_adapter.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_impl.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_impl.cpp: In member function 'void ncbi::blast::CPsiBlastImpl::x_ExtractQueryFromPssm()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_impl.cpp:122:23: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_iteration.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psi_pssm_input.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psi_pssm_input.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/msa_pssm_input.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/msa_pssm_input.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_aux_priv.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_aux_priv.cpp: In function 'void ncbi::blast::PsiBlastComputePssmScores(ncbi::CRef<ncbi::objects::CPssmWithParameters>, const ncbi::blast::CBlastOptions&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/psiblast_aux_priv.cpp:472:41: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_aux_priv.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_aux_priv.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/version.cpp -o version.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/version.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/dust_filter.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rps_aux.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/search_strategy.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/setup_factory.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/prelim_stage.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/traceback_stage.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/uniform_search.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_search.cpp -o local_search.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_search.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_search.cpp: In member function 'virtual ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalPssmSearch::Run()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/local_search.cpp:171:43: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_results.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/remote_search.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/query_data.cpp -o query_data.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/query_data.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/objmgr_query_data.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/objmgrfree_query_data.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/blast_dbindex.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_cxx.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_aux_priv.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_blk.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/split_query_blk.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/winmask_filter.cpp:43:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp: In member function 'ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalRPSBlast::Run()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp:385:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp: In member function 'ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalRPSBlast::RunThreadedSearch()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/rpsblast_local.cpp:418:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seedtop.cpp: In member function 'void ncbi::blast::CSeedTop::x_ParsePattern()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/seedtop.cpp:73:48: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/cdd_pssm_input.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blast/Blast4_value.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/api/deltablast.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxblast.so .libxblast.so.stamp
/usr/bin/g++ -shared -o libxblast.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgowinmask -lxalgodustmask -lseqmasks_io -lseqdb -lxobjread -lvariation -lcreaders -lxobjutil -lblastdb -lxnetblastcli -lxnetblast -lscoremat -lxconnect -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxblast.so
ln -f .xblast.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xblast.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
cd objtools/blast/services/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
cd objtools/blast/services/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services TMPL=blast_services -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services/blast_services.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblast_services.so .libblast_services.so.stamp
/usr/bin/g++ -shared -o libblast_services.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blast_services.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblast_services.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblast_services.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblast_services.so
ln -f .blast_services.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blast_services.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libgene_info.so .libgene_info.so.stamp
/usr/bin/g++ -shared -o libgene_info.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libgene_info.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libgene_info.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libgene_info.so
ln -f .gene_info.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.gene_info.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objects/id1/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1 && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh id1 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1'
/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
cd objects/id1/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1 TMPL=id1 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/id1__.cpp -o id1__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/id1___.cpp -o id1___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libid1.so .libid1.so.stamp
/usr/bin/g++ -shared -o libid1.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O id1__.o id1___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libid1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libid1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libid1.so
ln -f .id1.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.id1.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
cd objects/id2/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2 && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh id2 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2'
/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
cd objects/id2/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2 TMPL=id2 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/id2__.cpp -o id2__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/id2___.cpp -o id2___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libid2.so .libid2.so.stamp
/usr/bin/g++ -shared -o libid2.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O id2__.o id2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libid2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libid2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libid2.so
ln -f .id2.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.id2.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
cd util/compress/api/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
cd util/compress/api/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api TMPL=compress -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/compress.cpp -o compress.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/compress.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/stream.cpp -o stream.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/stream.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/streambuf.cpp -o streambuf.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/streambuf.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/stream_util.cpp -o stream_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/stream_util.hpp:49,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/stream_util.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/bzip2.cpp -o bzip2.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/bzip2.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/bzip2.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/zlib.cpp -o zlib.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/zlib.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/lzo.cpp -o lzo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/lzo.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/compress/reader_zlib.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/reader_zlib.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/tar.cpp -o tar.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/util/compress/api/tar.cpp:51:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxcompress.so .libxcompress.so.stamp
/usr/bin/g++ -shared -o libxcompress.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxcompress.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxcompress.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxcompress.so
ln -f .xcompress.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xcompress.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/dispatcher.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/seqref.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/blob_id.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/split_parser.cpp -o split_parser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/split_parser.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/split_parser.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/request_result.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/reader_service.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/incr_time.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/incr_time.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp
ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o split_parser.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader.a
ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader-static.dep
/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp
/usr/bin/g++ -shared -o libncbi_xreader.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o split_parser.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader.so
ln -f .ncbi_xreader.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp
ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_cache.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_cache.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_cache.a
ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_cache-static.dep
/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp
/usr/bin/g++ -shared -o libncbi_xreader_cache.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O reader_cache.o writer_cache.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_cache.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_cache.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_cache.so
ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_cache.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp
ar cr libncbi_xreader_id1.a reader_id1.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_id1.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_id1.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_id1.a
ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_id1-static.dep
/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp
/usr/bin/g++ -shared -o libncbi_xreader_id1.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O reader_id1.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_id1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_id1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_id1.so
ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_id1.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp
ar cr libncbi_xreader_id2.a reader_id2.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_id2.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_id2.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_id2.a
ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_id2-static.dep
/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp
/usr/bin/g++ -shared -o libncbi_xreader_id2.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O reader_id2.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xreader_id2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xreader_id2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xreader_id2.so
ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xreader_id2.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbloader.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbloader.cpp: In member function 'virtual ncbi::objects::CDataLoader::TTSE_Lock ncbi::objects::CGBDataLoader::ResolveConflict(const ncbi::objects::CSeq_id_Handle&, const TTSE_LockSet&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbloader.cpp:850:18: warning: variable 'conflict' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/genbank/gbload_util.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp
ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xloader_genbank.a
ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xloader_genbank-static.dep
/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp
/usr/bin/g++ -shared -o libncbi_xloader_genbank.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O gbloader.o gbload_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xreader_id2 -lncbi_xreader_id1 -lncbi_xreader_cache -lncbi_xreader -lxobjmgr -lseq -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xloader_genbank.so
ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xloader_genbank.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
cd objects/taxon1/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1 && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh taxon1 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1'
/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
cd objects/taxon1/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1 TMPL=taxon1 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/taxon1.cpp:34:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/cache.cpp -o cache.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/cache.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/utils.cpp -o utils.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libtaxon1.so .libtaxon1.so.stamp
/usr/bin/g++ -shared -o libtaxon1.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libtaxon1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libtaxon1.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libtaxon1.so
ln -f .taxon1.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.taxon1.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
cd objtools/alnmgr/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
cd objtools/alnmgr/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr TMPL=alnmgr -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/aln_builders.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:71:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/ncbi_bitset.hpp:53,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h: In constructor 'bm::blocks_manager<Alloc>::blocks_manager(const gap_word_t*, bm::id_t, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::id_t = unsigned int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bm.h:848:20: instantiated from 'bm::bvector<A>::bvector(bm::strategy, const gap_word_t*, bm::bvector<A>::size_type, const Alloc&) [with Alloc = bm::mem_alloc<bm::block_allocator, bm::ptr_allocator>, bm::gap_word_t = short unsigned int, bm::bvector<A>::size_type = unsigned int]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/aln_stats.hpp:325:13: instantiated from 'size_t ncbi::CAlnStats<_TAlnIdVec>::x_AddId(const TAlnSeqIdIRef&, size_t, size_t) [with _TAlnIdVec = ncbi::CAlnIdMap<std::vector<const ncbi::objects::CSeq_align*>, ncbi::CAlnSeqIdsExtract<ncbi::CAlnSeqId, ncbi::CScopeAlnSeqIdConverter<ncbi::CAlnSeqId> > >, size_t = unsigned int, ncbi::TAlnSeqIdIRef = ncbi::CIRef<ncbi::IAlnSeqId>]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/aln_stats.hpp:118:21: instantiated from 'ncbi::CAlnStats<_TAlnIdVec>::CAlnStats(const TAlnIdVec&) [with _TAlnIdVec = ncbi::CAlnIdMap<std::vector<const ncbi::objects::CSeq_align*>, ncbi::CAlnSeqIdsExtract<ncbi::CAlnSeqId, ncbi::CScopeAlnSeqIdConverter<ncbi::CAlnSeqId> > >, ncbi::CAlnStats<_TAlnIdVec>::TAlnIdVec = ncbi::CAlnIdMap<std::vector<const ncbi::objects::CSeq_align*>, ncbi::CAlnSeqIdsExtract<ncbi::CAlnSeqId, ncbi::CScopeAlnSeqIdConverter<ncbi::CAlnSeqId> > >]'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_generators.cpp:1173:40: instantiated from here
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/bitset/bmblocks.h:649:14: warning: variable 'c' set but not used [-Wunused-but-set-variable]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/aln_seqid.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/align_range.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alndiag.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alndiag.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_align> ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector<int>&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmap.cpp:1473:56: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixMatch>&, const ncbi::CRef<ncbi::objects::CAlnMixMatch>&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp:78:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp:195:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp:197:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmatch.cpp:199:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp:103:42: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp:141:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp:1224:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmerger.cpp:151:17: warning: 'width2' may be used uninitialized in this function [-Wuninitialized]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnmix.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp:103:42: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnsegments.cpp:35:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp:103:42: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnsegments.cpp:309:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnseq.cpp:37:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnsegments.hpp:103:42: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixSeq>&, const ncbi::CRef<ncbi::objects::CAlnMixSeq>&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnseq.cpp:86:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvec_iterator.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp:136:80: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alnvecprint.cpp:300:80: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/score_builder_base.cpp: In function 'void ncbi::s_GetSplicedSegIdentityMismatch(ncbi::objects::CScope&, const ncbi::objects::CSeq_align&, const ncbi::CRangeCollection<unsigned int>&, int*, int*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/alnmgr/score_builder_base.cpp:231:31: warning: variable 'is_match' set but not used [-Wunused-but-set-variable]
/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp
/usr/bin/g++ -shared -o libxalnmgr.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxalnmgr.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxalnmgr.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxalnmgr.so
ln -f .xalnmgr.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xalnmgr.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
cd cgi/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
cd cgi/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi TMPL=cgi -w all
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/.#lock-map.
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbicgi.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgiapp.cpp -o cgiapp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgiapp.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgictx.cpp -o cgictx.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgictx.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbicgir.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbires.cpp -o ncbires.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ncbires.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ref_args.cpp -o ref_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/ref_args.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/ref_args.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_run.cpp -o cgi_run.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/cgiapp.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_run.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_util.cpp -o cgi_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/ncbi_url.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/cgi_util.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_util.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_serial.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_session.cpp -o cgi_session.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_session.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/cgi_exception.hpp:39:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_exception.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgiapp_cached.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/impl/cgi_entry_reader.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/cgi_entry_reader.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/user_agent.cpp -o user_agent.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/user_agent.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/cgi/user_agent.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxcgi.so .libxcgi.so.stamp
/usr/bin/g++ -shared -o libxcgi.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxcgi.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxcgi.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxcgi.so
ln -f .xcgi.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xcgi.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
cd html/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
cd html/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html TMPL=html -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/node.cpp -o node.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/node.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/html.cpp -o html.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/html.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/htmlhelper.cpp -o htmlhelper.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/htmlhelper.cpp:32:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/page.cpp -o page.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/page.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/pager.cpp -o pager.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/pager.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/selection.cpp -o selection.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/selection.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/components.cpp -o components.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/components.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/components.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/jsmenu.cpp -o jsmenu.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/jsmenu.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/commentdiag.cpp -o commentdiag.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/commentdiag.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/commentdiag.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/indentstream.cpp -o indentstream.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/indentstream.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/indentstream.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/html_exception.cpp -o html_exception.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/node.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/html_exception.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/htmlhelper.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/html/writer_htmlenc.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxhtml.so .libxhtml.so.stamp
/usr/bin/g++ -shared -o libxhtml.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O node.o html.o htmlhelper.o page.o pager.o selection.o components.o jsmenu.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxhtml.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxhtml.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxhtml.so
ln -f .xhtml.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xhtml.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
cd objtools/align_format/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
cd objtools/align_format/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format TMPL=align_format -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/align_format/format_flags.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/format_flags.cpp:30:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/align_format_util.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static std::map<std::basic_string<char>, ncbi::CRef<ncbi::objects::CSeq_align_set> > ncbi::align_format::CAlignFormatUtil::HspListToHitMap(std::vector<std::basic_string<char> >, const ncbi::objects::CSeq_align_set&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/align_format_util.cpp:1487:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showdefline.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showalign.cpp -o showalign.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/align_format/showalign.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showalign.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showalign.cpp: In member function 'virtual std::string ncbi::align_format::CDisplaySeqalign::x_DisplayRowData(ncbi::align_format::CDisplaySeqalign::SAlnRowInfo*)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/showalign.cpp:1710:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/tabular.cpp -o tabular.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/tabular.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/align_format/vectorscreen.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/vectorscreen.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/seqalignfilter.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/aln_printer.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libalign_format.so .libalign_format.so.stamp
/usr/bin/g++ -shared -o libalign_format.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o aln_printer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libalign_format.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libalign_format.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libalign_format.so
ln -f .align_format.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.align_format.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/seq_writer.cpp: In function 'std::string ncbi::s_GetTitle(ncbi::CConstRef<ncbi::objects::CBioseq>)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:206:1: warning: control reaches end of non-void function [-Wreturn-type]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp
/usr/bin/g++ -shared -o libblastdb_format.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O seq_writer.o blastdb_dataextract.o blastdb_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblastdb_format.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblastdb_format.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblastdb_format.so
ln -f .blastdb_format.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blastdb_format.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp
/usr/bin/g++ -shared -o libncbi_xloader_blastdb.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xloader_blastdb.so
ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xloader_blastdb.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp
/usr/bin/g++ -shared -o libncbi_xloader_blastdb_rmt.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so
ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
cd connect/ext/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
cd connect/ext/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext TMPL=xconnext -w all
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_xconnext to make__ext_common per /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/.#lock-map.
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_dblb.c -o ncbi_dblb.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_iprange.c -o ncbi_iprange.o
/usr/bin/gcc -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/connect/ext/ncbi_dblb_svcmapper.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxconnext.so .libxconnext.so.stamp
/usr/bin/g++ -shared -o libxconnext.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_iprange.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxconnect -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxconnext.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxconnext.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxconnext.so
ln -f .xconnext.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xconnext.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
cd algo/blast/blastinput/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
cd algo/blast/blastinput/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput TMPL=blastinput -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_input.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_scope_src.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_scope_src.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_args.cpp:44:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/cmdline_flags.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/cmdline_flags.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blast_input_aux.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastp_args.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastn_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rmblastn_args.cpp:25:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/blastx_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/tblastn_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/tblastx_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/psiblast_args.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rpsblast_args.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/igblastn_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/igblastp_args.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/deltablast_args.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblastinput.so .libblastinput.so.stamp
/usr/bin/g++ -shared -o libblastinput.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblastinput.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblastinput.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblastinput.so
ln -f .blastinput.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blastinput.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
cd objects/blastxml/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh blastxml all
File blastxml.module not found. Using defaults...
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml'
/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
cd objects/blastxml/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml TMPL=blastxml -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblastxml.so .libblastxml.so.stamp
/usr/bin/g++ -shared -o libblastxml.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blastxml__.o blastxml___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblastxml.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblastxml.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblastxml.so
ln -f .blastxml.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blastxml.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
cd objects/entrez2/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2 && /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/new_module.sh entrez2 all
Platform not defined for Linux armv7l -- please fix me
/usr/bin/make -w -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ DATATOOL=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2'
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++ -opm /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.7.0
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
cd objects/entrez2/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2 TMPL=entrez2 -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libentrez2.so .libentrez2.so.stamp
/usr/bin/g++ -shared -o libentrez2.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O entrez2__.o entrez2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxser -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libentrez2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libentrez2.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libentrez2.so
ln -f .entrez2.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.entrez2.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
cd objects/entrez2/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `all'.
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2 TMPL=entrez2cli -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp
/usr/bin/g++ -shared -o libentrez2cli.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O entrez2_client.o entrez2_client_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lentrez2 -lxser -lxconnect -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libentrez2cli.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libentrez2cli.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libentrez2cli.so
ln -f .entrez2cli.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.entrez2cli.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
cd corelib/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
cd algo/blast/format/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
cd algo/blast/format/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format TMPL=xblastformat -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/blastfmtutil.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blastfmtutil.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blastxml_format.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blast_format.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blast_format.cpp:52:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/data4xmlformat.hpp:133:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:165) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef<ncbi::objects::CSeq_align_set>, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/blast_format.cpp:400:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/data4xmlformat.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/data4xmlformat.cpp:41:0:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/data4xmlformat.hpp:133:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:165) [-Wdeprecated-declarations]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/build_archive.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/format/vecscreen_run.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxblastformat.so .libxblastformat.so.stamp
/usr/bin/g++ -shared -o libxblastformat.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blastfmtutil.o blastxml_format.o blast_format.o data4xmlformat.o build_archive.o vecscreen_run.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxblast -lalign_format -lxalnmgr -lxobjmgr -lxnetblast -lscoremat -lblastxml -lseq -lgeneral -lxser -ltables -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxblastformat.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxblastformat.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxblastformat.so
ln -f .xblastformat.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xblastformat.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp: In member function 'void blastinput::ReadMultipleAccessionsFromMemory::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:1082:55: warning: right operand of comma operator has no effect [-Wunused-value]
/tmp/ccZPHuR4.s: Assembler messages:
/tmp/ccZPHuR4.s:4964: Warning: swp{b} use is deprecated for this architecture
/tmp/ccZPHuR4.s:4973: Warning: swp{b} use is deprecated for this architecture
/tmp/ccZPHuR4.s:4990: Warning: swp{b} use is deprecated for this architecture
/tmp/ccZPHuR4.s:5035: Warning: swp{b} use is deprecated for this architecture
/tmp/ccZPHuR4.s:5044: Warning: swp{b} use is deprecated for this architecture
/tmp/ccZPHuR4.s:5061: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc5LrdG3.s: Assembler messages:
/tmp/cc5LrdG3.s:1393: Warning: swp{b} use is deprecated for this architecture
/tmp/cc5LrdG3.s:1403: Warning: swp{b} use is deprecated for this architecture
/tmp/cc5LrdG3.s:1420: Warning: swp{b} use is deprecated for this architecture
/tmp/cc5LrdG3.s:1484: Warning: swp{b} use is deprecated for this architecture
/tmp/cc5LrdG3.s:1494: Warning: swp{b} use is deprecated for this architecture
/tmp/cc5LrdG3.s:1511: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lnsl -lz -lbz2 -ldl -lm -lpthread -o blastinput_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastinput_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastinput_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastinput_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:47:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie main.o mkindex_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lcreaders -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o makembindex
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f makembindex /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f makembindex /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/makembindex
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd algo/blast/igblast/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/igblast/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/igblast TMPL=igblast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/igblast/igblast.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libigblast.so .libigblast.so.stamp
/usr/bin/g++ -shared -o libigblast.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O igblast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libigblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libigblast.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libigblast.so
ln -f .igblast.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.igblast.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
cd objtools/simple/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
cd objtools/simple/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/simple TMPL=xobjsimple -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/simple/simple_om.cpp -o simple_om.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp
/usr/bin/g++ -shared -o libxobjsimple.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O simple_om.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxobjsimple.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxobjsimple.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxobjsimple.so
ln -f .xobjsimple.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xobjsimple.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp: In function 'Uint4 TestUtil::EndianIndependentBufferHash(const char*, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:258:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccBfEriY.s: Assembler messages:
/tmp/ccBfEriY.s:797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:806: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:823: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:868: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:877: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:894: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1235: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1244: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1261: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1364: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1373: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1390: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1493: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1502: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1519: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1622: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1631: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1648: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1769: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1778: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1795: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1916: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1925: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:1942: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2063: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2072: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2089: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2210: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2219: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2236: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2357: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2366: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2452: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2573: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2582: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2599: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2720: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2729: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2746: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2867: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2876: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:2893: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3014: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3024: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3041: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3443: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3451: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3468: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3514: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3522: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3539: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3585: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3593: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3610: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3656: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3664: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3681: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3727: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3735: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3752: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3798: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3806: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3823: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3869: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3877: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3894: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3940: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3948: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:3965: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4011: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4019: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4036: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4081: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4090: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4107: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4152: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4160: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4177: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4223: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4231: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4248: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4294: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4302: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:4319: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5435: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5444: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5461: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5575: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5584: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5601: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5740: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5749: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5766: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5861: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5871: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5888: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5982: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:5992: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6009: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6055: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6065: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6082: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6632: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6641: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6658: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6771: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6780: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6911: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6920: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:6937: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7051: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7060: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7077: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7190: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7200: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7217: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7399: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7408: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7425: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7473: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7483: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7500: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7547: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7556: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7573: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7622: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7631: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7648: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7730: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7739: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBfEriY.s:7756: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc1k9ffO.s: Assembler messages:
/tmp/cc1k9ffO.s:5038: Warning: swp{b} use is deprecated for this architecture
/tmp/cc1k9ffO.s:5047: Warning: swp{b} use is deprecated for this architecture
/tmp/cc1k9ffO.s:5064: Warning: swp{b} use is deprecated for this architecture
/tmp/cc1k9ffO.s:5109: Warning: swp{b} use is deprecated for this architecture
/tmp/cc1k9ffO.s:5118: Warning: swp{b} use is deprecated for this architecture
/tmp/cc1k9ffO.s:5135: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccqUyhum.s: Assembler messages:
/tmp/ccqUyhum.s:1115: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1124: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1141: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1186: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1195: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1212: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1782: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1791: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1808: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1917: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1927: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:1944: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2054: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2064: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2081: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2128: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2137: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2154: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2662: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2671: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2688: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2802: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2811: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2828: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2936: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2945: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:2962: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3148: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3157: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3174: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3284: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3294: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3311: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3416: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3425: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3442: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3493: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3502: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3519: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3796: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3805: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3822: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3869: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3879: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3896: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3943: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3952: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqUyhum.s:3969: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:71:6: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1246:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1250:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1255:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1257:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1261:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1263:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1267:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1269:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1273:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1275:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1313:1: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:165) [-Wdeprecated-declarations]
/tmp/cccUuV5h.s: Assembler messages:
/tmp/cccUuV5h.s:4072: Warning: swp{b} use is deprecated for this architecture
/tmp/cccUuV5h.s:4082: Warning: swp{b} use is deprecated for this architecture
/tmp/cccUuV5h.s:4099: Warning: swp{b} use is deprecated for this architecture
/tmp/cccUuV5h.s:4163: Warning: swp{b} use is deprecated for this architecture
/tmp/cccUuV5h.s:4173: Warning: swp{b} use is deprecated for this architecture
/tmp/cccUuV5h.s:4190: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccR4GVWy.s: Assembler messages:
/tmp/ccR4GVWy.s:3095: Warning: swp{b} use is deprecated for this architecture
/tmp/ccR4GVWy.s:3104: Warning: swp{b} use is deprecated for this architecture
/tmp/ccR4GVWy.s:3121: Warning: swp{b} use is deprecated for this architecture
/tmp/ccR4GVWy.s:3166: Warning: swp{b} use is deprecated for this architecture
/tmp/ccR4GVWy.s:3175: Warning: swp{b} use is deprecated for this architecture
/tmp/ccR4GVWy.s:3192: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccfzj5CD.s: Assembler messages:
/tmp/ccfzj5CD.s:1828: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfzj5CD.s:1838: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfzj5CD.s:1855: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfzj5CD.s:1920: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfzj5CD.s:1930: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfzj5CD.s:1947: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccpZVcgE.s: Assembler messages:
/tmp/ccpZVcgE.s:3589: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpZVcgE.s:3598: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpZVcgE.s:3615: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpZVcgE.s:3660: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpZVcgE.s:3669: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpZVcgE.s:3686: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cco76MAf.s: Assembler messages:
/tmp/cco76MAf.s:1082: Warning: swp{b} use is deprecated for this architecture
/tmp/cco76MAf.s:1092: Warning: swp{b} use is deprecated for this architecture
/tmp/cco76MAf.s:1109: Warning: swp{b} use is deprecated for this architecture
/tmp/cco76MAf.s:1173: Warning: swp{b} use is deprecated for this architecture
/tmp/cco76MAf.s:1183: Warning: swp{b} use is deprecated for this architecture
/tmp/cco76MAf.s:1200: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc3uL9fy.s: Assembler messages:
/tmp/cc3uL9fy.s:1230: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3uL9fy.s:1239: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3uL9fy.s:1256: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3uL9fy.s:1301: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3uL9fy.s:1310: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3uL9fy.s:1327: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc88ro6c.s: Assembler messages:
/tmp/cc88ro6c.s:1332: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1341: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1358: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1403: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1412: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1429: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1591: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1600: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1617: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1732: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1741: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1758: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1867: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1877: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1894: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1943: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1952: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:1969: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3017: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3026: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3043: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3155: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3164: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3181: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3290: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3300: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3317: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3366: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3375: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3392: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3849: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3858: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3875: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3936: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3945: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:3962: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7070: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7079: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7096: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7245: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7254: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7271: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7420: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7429: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7446: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7738: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7747: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7764: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7864: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7873: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7890: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7942: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7951: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:7968: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8021: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8030: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8047: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8100: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8109: Warning: swp{b} use is deprecated for this architecture
/tmp/cc88ro6c.s:8126: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccjx0Ovx.s: Assembler messages:
/tmp/ccjx0Ovx.s:1091: Warning: swp{b} use is deprecated for this architecture
/tmp/ccjx0Ovx.s:1101: Warning: swp{b} use is deprecated for this architecture
/tmp/ccjx0Ovx.s:1118: Warning: swp{b} use is deprecated for this architecture
/tmp/ccjx0Ovx.s:1183: Warning: swp{b} use is deprecated for this architecture
/tmp/ccjx0Ovx.s:1193: Warning: swp{b} use is deprecated for this architecture
/tmp/ccjx0Ovx.s:1210: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccn98uPu.s: Assembler messages:
/tmp/ccn98uPu.s:1287: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:1296: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:1313: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:1358: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:1367: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:1384: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2057: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2066: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2083: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2238: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2247: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2264: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2420: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2429: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2446: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2597: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2606: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2623: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2776: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2785: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2802: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2951: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2960: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:2977: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3148: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3158: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3175: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3225: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3234: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3251: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3305: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3314: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3331: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3385: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3394: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3411: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3465: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3474: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3491: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3545: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3554: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:3571: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:4808: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:4817: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:4834: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:4989: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:4998: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5015: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5171: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5180: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5197: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5348: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5357: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5374: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5528: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5537: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5554: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5705: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5714: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5731: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5953: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5962: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:5979: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6128: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6137: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6154: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6297: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6307: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6324: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6374: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6383: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6400: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6454: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6463: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6480: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6534: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6543: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6560: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6614: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6623: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6640: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6694: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6703: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6720: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6774: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6783: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6800: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6854: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6863: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:6880: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9129: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9139: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9156: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9238: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9248: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9265: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9790: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9800: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9817: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9899: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9909: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:9926: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10476: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10485: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10502: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10659: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10668: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10685: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10806: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10823: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10933: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10942: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:10959: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11110: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11119: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11136: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11288: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11297: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11314: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11466: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11475: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11492: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11715: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11724: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11741: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11877: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11887: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11904: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11954: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11963: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:11980: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12033: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12042: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12059: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12112: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12121: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12138: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12191: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12200: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12217: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12627: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12636: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12653: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12704: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12713: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12730: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12781: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12790: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn98uPu.s:12807: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:441:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_options.hpp:167) [-Wdeprecated-declarations]
/tmp/ccY9SsCy.s: Assembler messages:
/tmp/ccY9SsCy.s:1953: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY9SsCy.s:1963: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY9SsCy.s:1980: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY9SsCy.s:2045: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY9SsCy.s:2055: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY9SsCy.s:2072: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccAabelE.s: Assembler messages:
/tmp/ccAabelE.s:1138: Warning: swp{b} use is deprecated for this architecture
/tmp/ccAabelE.s:1148: Warning: swp{b} use is deprecated for this architecture
/tmp/ccAabelE.s:1165: Warning: swp{b} use is deprecated for this architecture
/tmp/ccAabelE.s:1229: Warning: swp{b} use is deprecated for this architecture
/tmp/ccAabelE.s:1239: Warning: swp{b} use is deprecated for this architecture
/tmp/ccAabelE.s:1256: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccmYxKEw.s: Assembler messages:
/tmp/ccmYxKEw.s:1646: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmYxKEw.s:1655: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmYxKEw.s:1672: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmYxKEw.s:1717: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmYxKEw.s:1726: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmYxKEw.s:1743: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cchmK5KK.s: Assembler messages:
/tmp/cchmK5KK.s:1023: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1032: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1049: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1094: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1103: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1120: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1442: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1451: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1468: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1620: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1630: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1647: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1700: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1708: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1725: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1898: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1907: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:1924: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2242: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2251: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2268: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2439: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2448: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2465: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2615: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2624: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2641: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2715: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2723: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2740: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2786: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2794: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2811: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2982: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:2990: Warning: swp{b} use is deprecated for this architecture
/tmp/cchmK5KK.s:3007: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccHhSEC3.s: Assembler messages:
/tmp/ccHhSEC3.s:1937: Warning: swp{b} use is deprecated for this architecture
/tmp/ccHhSEC3.s:1947: Warning: swp{b} use is deprecated for this architecture
/tmp/ccHhSEC3.s:1964: Warning: swp{b} use is deprecated for this architecture
/tmp/ccHhSEC3.s:2028: Warning: swp{b} use is deprecated for this architecture
/tmp/ccHhSEC3.s:2038: Warning: swp{b} use is deprecated for this architecture
/tmp/ccHhSEC3.s:2055: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccwwusqm.s: Assembler messages:
/tmp/ccwwusqm.s:1028: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1037: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1054: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1099: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1108: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1125: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1426: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1435: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1452: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1654: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1663: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1680: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1856: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1865: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:1882: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2031: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2040: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2057: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2213: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2222: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2239: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2346: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2356: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2373: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2456: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2464: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2481: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2581: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2589: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2606: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2652: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2660: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2677: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2921: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2929: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:2946: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3095: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3103: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3120: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3167: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3176: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:3193: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:4870: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:4879: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:4896: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5076: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5085: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5102: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5256: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5265: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5282: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5654: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5663: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5680: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5787: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5796: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5813: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5959: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5968: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:5985: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6154: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6163: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6180: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6349: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6358: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6375: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6482: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6492: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6509: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6638: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6646: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6663: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6711: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6719: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6736: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6934: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6942: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:6959: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7054: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7064: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7081: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7128: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7138: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7155: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7348: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7358: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7375: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7446: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7455: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7472: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7523: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7532: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7549: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7760: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7770: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwusqm.s:7787: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccRcVDPI.s: Assembler messages:
/tmp/ccRcVDPI.s:1514: Warning: swp{b} use is deprecated for this architecture
/tmp/ccRcVDPI.s:1523: Warning: swp{b} use is deprecated for this architecture
/tmp/ccRcVDPI.s:1540: Warning: swp{b} use is deprecated for this architecture
/tmp/ccRcVDPI.s:1585: Warning: swp{b} use is deprecated for this architecture
/tmp/ccRcVDPI.s:1594: Warning: swp{b} use is deprecated for this architecture
/tmp/ccRcVDPI.s:1611: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc2KRwVG.s: Assembler messages:
/tmp/cc2KRwVG.s:2389: Warning: swp{b} use is deprecated for this architecture
/tmp/cc2KRwVG.s:2399: Warning: swp{b} use is deprecated for this architecture
/tmp/cc2KRwVG.s:2416: Warning: swp{b} use is deprecated for this architecture
/tmp/cc2KRwVG.s:2481: Warning: swp{b} use is deprecated for this architecture
/tmp/cc2KRwVG.s:2491: Warning: swp{b} use is deprecated for this architecture
/tmp/cc2KRwVG.s:2508: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccIWpeYp.s: Assembler messages:
/tmp/ccIWpeYp.s:1283: Warning: swp{b} use is deprecated for this architecture
/tmp/ccIWpeYp.s:1293: Warning: swp{b} use is deprecated for this architecture
/tmp/ccIWpeYp.s:1310: Warning: swp{b} use is deprecated for this architecture
/tmp/ccIWpeYp.s:1375: Warning: swp{b} use is deprecated for this architecture
/tmp/ccIWpeYp.s:1385: Warning: swp{b} use is deprecated for this architecture
/tmp/ccIWpeYp.s:1402: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccVUpPsi.s: Assembler messages:
/tmp/ccVUpPsi.s:1548: Warning: swp{b} use is deprecated for this architecture
/tmp/ccVUpPsi.s:1558: Warning: swp{b} use is deprecated for this architecture
/tmp/ccVUpPsi.s:1575: Warning: swp{b} use is deprecated for this architecture
/tmp/ccVUpPsi.s:1639: Warning: swp{b} use is deprecated for this architecture
/tmp/ccVUpPsi.s:1649: Warning: swp{b} use is deprecated for this architecture
/tmp/ccVUpPsi.s:1666: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccpGRNXW.s: Assembler messages:
/tmp/ccpGRNXW.s:2399: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpGRNXW.s:2409: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpGRNXW.s:2426: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpGRNXW.s:2490: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpGRNXW.s:2500: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpGRNXW.s:2517: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc4gCXj0.s: Assembler messages:
/tmp/cc4gCXj0.s:1187: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4gCXj0.s:1197: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4gCXj0.s:1214: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4gCXj0.s:1279: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4gCXj0.s:1289: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4gCXj0.s:1306: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccQrwHuF.s: Assembler messages:
/tmp/ccQrwHuF.s:1459: Warning: swp{b} use is deprecated for this architecture
/tmp/ccQrwHuF.s:1469: Warning: swp{b} use is deprecated for this architecture
/tmp/ccQrwHuF.s:1486: Warning: swp{b} use is deprecated for this architecture
/tmp/ccQrwHuF.s:1551: Warning: swp{b} use is deprecated for this architecture
/tmp/ccQrwHuF.s:1561: Warning: swp{b} use is deprecated for this architecture
/tmp/ccQrwHuF.s:1578: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccySHoMf.s: Assembler messages:
/tmp/ccySHoMf.s:1252: Warning: swp{b} use is deprecated for this architecture
/tmp/ccySHoMf.s:1262: Warning: swp{b} use is deprecated for this architecture
/tmp/ccySHoMf.s:1279: Warning: swp{b} use is deprecated for this architecture
/tmp/ccySHoMf.s:1344: Warning: swp{b} use is deprecated for this architecture
/tmp/ccySHoMf.s:1354: Warning: swp{b} use is deprecated for this architecture
/tmp/ccySHoMf.s:1371: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccFBWhGK.s: Assembler messages:
/tmp/ccFBWhGK.s:1451: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:1460: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:1477: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:1522: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:1531: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:1548: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2249: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2258: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2275: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2412: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2422: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:2439: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:3989: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:3998: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4015: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4185: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4194: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4211: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4361: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4370: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4387: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4540: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4549: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4566: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4716: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4725: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4742: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4897: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4906: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:4923: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5146: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5155: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5172: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5436: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5446: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5463: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5510: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5520: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5537: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5584: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5594: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5611: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5658: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5668: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5685: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5734: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5743: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5760: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5811: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5820: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5837: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5888: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5897: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:5914: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7261: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7270: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7287: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7439: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7448: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7465: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7621: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7630: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7647: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7819: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7829: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7846: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7895: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7904: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7921: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7972: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7981: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:7998: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9005: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9014: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9031: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9183: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9192: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9209: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9366: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9375: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9392: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9552: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9562: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9579: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9628: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9637: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9654: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9705: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9714: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFBWhGK.s:9731: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccSrSD1P.s: Assembler messages:
/tmp/ccSrSD1P.s:4433: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:4442: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:4459: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:4504: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:4513: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:4530: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:12894: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:12903: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:12920: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13174: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13182: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13199: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13509: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13518: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13535: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13956: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13964: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:13981: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14318: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14327: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14344: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14596: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14604: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14621: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14931: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14940: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:14957: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:15380: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:15388: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:15405: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16636: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16645: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16662: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16779: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16788: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:16805: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17091: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17101: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17118: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17166: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17174: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17191: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17607: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17616: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17633: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17904: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17912: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:17929: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26163: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26173: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26190: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26298: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26307: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:26324: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33376: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33386: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33403: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33511: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33520: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:33537: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34088: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34098: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34115: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34223: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34232: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34249: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34807: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34824: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34930: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34939: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:34956: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37514: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37524: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37541: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37649: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37658: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:37675: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38799: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38809: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38826: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38934: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38943: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:38960: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43210: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43220: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43237: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43345: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43354: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:43371: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44787: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44814: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44922: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44931: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:44948: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46806: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46816: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46833: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46941: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46950: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:46967: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47520: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47530: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47547: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47655: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47664: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:47681: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48516: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48526: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48543: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48651: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48660: Warning: swp{b} use is deprecated for this architecture
/tmp/ccSrSD1P.s:48677: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc9NLDyC.s: Assembler messages:
/tmp/cc9NLDyC.s:979: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:988: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1005: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1050: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1059: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1076: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1437: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1446: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1463: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1611: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1620: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1637: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1748: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1757: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1774: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1881: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1891: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1908: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1977: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:1985: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2002: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2170: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2179: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2196: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2242: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2250: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2267: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2315: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2323: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2340: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2623: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2632: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2649: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2755: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2764: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2781: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2887: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2896: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:2913: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3022: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3031: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3048: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3153: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3162: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3179: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3287: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3297: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3314: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3515: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3524: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3541: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3586: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3594: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3611: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3657: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3665: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3682: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3728: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3736: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3753: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3836: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3844: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3861: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3907: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3915: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:3932: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4222: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4231: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4248: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4354: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4363: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4380: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4486: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4495: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4512: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4621: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4630: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4647: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4752: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4761: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4778: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4886: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4896: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:4913: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5114: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5123: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5140: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5185: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5193: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5210: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5256: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5264: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5281: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5327: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5335: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5352: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5435: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5443: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5460: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5506: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5514: Warning: swp{b} use is deprecated for this architecture
/tmp/cc9NLDyC.s:5531: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cchtYvYE.s: Assembler messages:
/tmp/cchtYvYE.s:979: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:988: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1005: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1050: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1059: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1076: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1444: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1453: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1470: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1619: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1628: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1645: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1755: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1765: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1782: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1843: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1851: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:1868: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2019: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2027: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2044: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2090: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2099: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2116: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2374: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2383: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2400: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2506: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2515: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2532: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2638: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2647: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2664: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2773: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2782: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2799: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2904: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2913: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:2930: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3038: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3048: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3065: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3266: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3275: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3292: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3337: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3345: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3362: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3408: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3416: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3433: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3479: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3487: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3504: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3587: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3595: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3612: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3658: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3666: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3683: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3973: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3982: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:3999: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4105: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4114: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4131: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4237: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4246: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4263: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4372: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4381: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4398: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4503: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4512: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4529: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4637: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4647: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4664: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4865: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4874: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4891: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4936: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4944: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:4961: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5007: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5015: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5032: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5078: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5086: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5103: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5186: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5194: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5211: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5257: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5265: Warning: swp{b} use is deprecated for this architecture
/tmp/cchtYvYE.s:5282: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc3c92Mr.s: Assembler messages:
/tmp/cc3c92Mr.s:1332: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:1341: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:1358: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:1403: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:1412: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:1429: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2581: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2590: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2607: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2764: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2773: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2790: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2946: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2955: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:2972: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3098: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3107: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3124: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3209: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3218: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3235: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3288: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3297: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3314: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3367: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3376: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3393: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3686: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3695: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:3712: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4482: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4491: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4508: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4659: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4668: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4685: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4836: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4846: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4863: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:4995: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5005: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5022: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5070: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5079: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5096: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5145: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5154: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5171: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5583: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5592: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5609: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5762: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5771: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5788: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5944: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5953: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:5970: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6124: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6134: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6151: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6232: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6242: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6259: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6308: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6317: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6334: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6386: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6395: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6412: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6465: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6474: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:6491: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7416: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7425: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7442: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7705: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7714: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7731: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7891: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7900: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:7917: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8043: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8052: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8069: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8159: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8168: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8185: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8238: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8247: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8264: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8317: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8326: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8343: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8636: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8645: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:8662: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9467: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9476: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9493: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9650: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9659: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:9676: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10000: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10009: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10026: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10183: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10192: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10209: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10364: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10373: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10390: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10617: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10626: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10643: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10800: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10809: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10826: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10979: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:10988: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11005: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11136: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11146: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11163: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11213: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11222: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11239: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11292: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11301: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11318: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11371: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11380: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11397: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11450: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11459: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11476: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11529: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11538: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11555: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11608: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11617: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11634: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11687: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11696: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:11713: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:12966: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:12975: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:12992: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13153: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13162: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13179: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13459: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13468: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13485: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13645: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13654: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13671: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13830: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13839: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:13856: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14017: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14026: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14125: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14284: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14293: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14310: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14469: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14478: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14495: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14657: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14666: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14683: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14843: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14852: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:14869: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15026: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15035: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15052: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15214: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15224: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15241: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15290: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15299: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15316: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15368: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15377: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15394: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15446: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15455: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15472: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15524: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15533: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15550: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15602: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15611: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15628: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15680: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15689: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15706: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15758: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15767: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15784: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15836: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15845: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15862: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15914: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15923: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15940: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:15992: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:16001: Warning: swp{b} use is deprecated for this architecture
/tmp/cc3c92Mr.s:16018: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cceilCUd.s: Assembler messages:
/tmp/cceilCUd.s:3474: Warning: swp{b} use is deprecated for this architecture
/tmp/cceilCUd.s:3484: Warning: swp{b} use is deprecated for this architecture
/tmp/cceilCUd.s:3501: Warning: swp{b} use is deprecated for this architecture
/tmp/cceilCUd.s:3566: Warning: swp{b} use is deprecated for this architecture
/tmp/cceilCUd.s:3576: Warning: swp{b} use is deprecated for this architecture
/tmp/cceilCUd.s:3593: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccvt6DBu.s: Assembler messages:
/tmp/ccvt6DBu.s:947: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:956: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:973: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1018: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1027: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1044: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1382: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1391: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1408: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1576: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1585: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1602: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1783: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1792: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1809: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1964: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1973: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:1990: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2075: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2083: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2100: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2155: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2163: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2180: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2353: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2361: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2378: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2465: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2473: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2490: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2929: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2938: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:2955: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3123: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3132: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3149: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3330: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3339: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3356: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3511: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3520: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3537: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3622: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3630: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3647: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3702: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3710: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3727: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3900: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3908: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:3925: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4013: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4021: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4038: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4480: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4489: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4506: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4676: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4685: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4702: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4885: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4894: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:4911: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5065: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5074: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5091: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5176: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5184: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5201: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5256: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5264: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5281: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5454: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5462: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5479: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5566: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5574: Warning: swp{b} use is deprecated for this architecture
/tmp/ccvt6DBu.s:5591: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccP5Wovt.s: Assembler messages:
/tmp/ccP5Wovt.s:1258: Warning: swp{b} use is deprecated for this architecture
/tmp/ccP5Wovt.s:1268: Warning: swp{b} use is deprecated for this architecture
/tmp/ccP5Wovt.s:1285: Warning: swp{b} use is deprecated for this architecture
/tmp/ccP5Wovt.s:1349: Warning: swp{b} use is deprecated for this architecture
/tmp/ccP5Wovt.s:1359: Warning: swp{b} use is deprecated for this architecture
/tmp/ccP5Wovt.s:1376: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccJQn73M.s: Assembler messages:
/tmp/ccJQn73M.s:2211: Warning: swp{b} use is deprecated for this architecture
/tmp/ccJQn73M.s:2220: Warning: swp{b} use is deprecated for this architecture
/tmp/ccJQn73M.s:2237: Warning: swp{b} use is deprecated for this architecture
/tmp/ccJQn73M.s:2282: Warning: swp{b} use is deprecated for this architecture
/tmp/ccJQn73M.s:2291: Warning: swp{b} use is deprecated for this architecture
/tmp/ccJQn73M.s:2308: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccfijZaO.s: Assembler messages:
/tmp/ccfijZaO.s:1514: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:1523: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:1540: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:1585: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:1594: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:1611: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3299: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3308: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3325: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3533: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3543: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3560: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3768: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3777: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3794: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3827: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3837: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:3854: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5016: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5025: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5042: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5110: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5120: Warning: swp{b} use is deprecated for this architecture
/tmp/ccfijZaO.s:5137: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In static member function 'static void CQueryDataTestFixture::s_ObjMgrFree_QueryFactory_LocalDataFromBioseq(int)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:495:47: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In static member function 'static void CQueryDataTestFixture::s_ObjMgrFree_QueryFactory_LocalDataFromBioseq_set(const std::vector<int>&)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:509:47: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In member function 'void QueryData::ObjMgr_QueryFactory_LocalData_GetSumOfSequenceLengths::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:580:43: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/tmp/ccBPtZsd.s: Assembler messages:
/tmp/ccBPtZsd.s:2519: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBPtZsd.s:2529: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBPtZsd.s:2546: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBPtZsd.s:2610: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBPtZsd.s:2620: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBPtZsd.s:2637: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccC0K6rN.s: Assembler messages:
/tmp/ccC0K6rN.s:980: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:990: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1007: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1072: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1082: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1099: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1985: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:1995: Warning: swp{b} use is deprecated for this architecture
/tmp/ccC0K6rN.s:2012: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccaqQn3j.s: Assembler messages:
/tmp/ccaqQn3j.s:1901: Warning: swp{b} use is deprecated for this architecture
/tmp/ccaqQn3j.s:1911: Warning: swp{b} use is deprecated for this architecture
/tmp/ccaqQn3j.s:1928: Warning: swp{b} use is deprecated for this architecture
/tmp/ccaqQn3j.s:1992: Warning: swp{b} use is deprecated for this architecture
/tmp/ccaqQn3j.s:2002: Warning: swp{b} use is deprecated for this architecture
/tmp/ccaqQn3j.s:2019: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccY8Gp1w.s: Assembler messages:
/tmp/ccY8Gp1w.s:2978: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY8Gp1w.s:2988: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY8Gp1w.s:3005: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY8Gp1w.s:3069: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY8Gp1w.s:3079: Warning: swp{b} use is deprecated for this architecture
/tmp/ccY8Gp1w.s:3096: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccwwaeC4.s: Assembler messages:
/tmp/ccwwaeC4.s:1358: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwaeC4.s:1368: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwaeC4.s:1385: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwaeC4.s:1450: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwaeC4.s:1460: Warning: swp{b} use is deprecated for this architecture
/tmp/ccwwaeC4.s:1477: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccCPBRrb.s: Assembler messages:
/tmp/ccCPBRrb.s:685: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:694: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:711: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:756: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:765: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:782: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1229: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1239: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1256: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1321: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1330: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1347: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1540: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1550: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1567: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1632: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1641: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1658: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1851: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1861: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1878: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1943: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1952: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:1969: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2162: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2172: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2189: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2254: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2263: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2280: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2477: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2487: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2504: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2569: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2578: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2595: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2787: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2814: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2879: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2888: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:2905: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3103: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3112: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3129: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3237: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3247: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3264: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3357: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3366: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3383: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3429: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3437: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3454: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3676: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3686: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3703: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3768: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3777: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3794: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3989: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:3999: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4016: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4081: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4090: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4107: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4299: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4309: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4326: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4391: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4400: Warning: swp{b} use is deprecated for this architecture
/tmp/ccCPBRrb.s:4417: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccFYeSgz.s: Assembler messages:
/tmp/ccFYeSgz.s:949: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:958: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:975: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:1020: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:1029: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:1046: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2318: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2328: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2345: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2413: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2422: Warning: swp{b} use is deprecated for this architecture
/tmp/ccFYeSgz.s:2439: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccxrHg3G.s: Assembler messages:
/tmp/ccxrHg3G.s:1586: Warning: swp{b} use is deprecated for this architecture
/tmp/ccxrHg3G.s:1596: Warning: swp{b} use is deprecated for this architecture
/tmp/ccxrHg3G.s:1613: Warning: swp{b} use is deprecated for this architecture
/tmp/ccxrHg3G.s:1677: Warning: swp{b} use is deprecated for this architecture
/tmp/ccxrHg3G.s:1687: Warning: swp{b} use is deprecated for this architecture
/tmp/ccxrHg3G.s:1704: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccYlm93w.s: Assembler messages:
/tmp/ccYlm93w.s:1236: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYlm93w.s:1245: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYlm93w.s:1262: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYlm93w.s:1307: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYlm93w.s:1316: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYlm93w.s:1333: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc4PYGDO.s: Assembler messages:
/tmp/cc4PYGDO.s:1306: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4PYGDO.s:1316: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4PYGDO.s:1333: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4PYGDO.s:1397: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4PYGDO.s:1407: Warning: swp{b} use is deprecated for this architecture
/tmp/cc4PYGDO.s:1424: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/random_gen.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccqShYU2.s: Assembler messages:
/tmp/ccqShYU2.s:507: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:516: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:533: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:578: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:587: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:604: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:772: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:781: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:798: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:918: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:927: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:944: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1054: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1063: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1080: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1193: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1202: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1219: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1328: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1337: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1354: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1465: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1474: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1491: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1601: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1610: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1627: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1738: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1747: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1764: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1900: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1970: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:1987: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2150: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2160: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2177: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2226: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2235: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2252: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2301: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2310: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2327: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2376: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2385: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2402: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2451: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2460: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2477: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2526: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2535: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2552: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2601: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2610: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2627: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2676: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2685: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2702: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2753: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2762: Warning: swp{b} use is deprecated for this architecture
/tmp/ccqShYU2.s:2779: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc6RSbXa.s: Assembler messages:
/tmp/cc6RSbXa.s:2951: Warning: swp{b} use is deprecated for this architecture
/tmp/cc6RSbXa.s:2961: Warning: swp{b} use is deprecated for this architecture
/tmp/cc6RSbXa.s:2978: Warning: swp{b} use is deprecated for this architecture
/tmp/cc6RSbXa.s:3043: Warning: swp{b} use is deprecated for this architecture
/tmp/cc6RSbXa.s:3053: Warning: swp{b} use is deprecated for this architecture
/tmp/cc6RSbXa.s:3070: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/../../core -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/api -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/algo/blast/core /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccr6BrR5.s: Assembler messages:
/tmp/ccr6BrR5.s:1800: Warning: swp{b} use is deprecated for this architecture
/tmp/ccr6BrR5.s:1810: Warning: swp{b} use is deprecated for this architecture
/tmp/ccr6BrR5.s:1827: Warning: swp{b} use is deprecated for this architecture
/tmp/ccr6BrR5.s:1891: Warning: swp{b} use is deprecated for this architecture
/tmp/ccr6BrR5.s:1901: Warning: swp{b} use is deprecated for this architecture
/tmp/ccr6BrR5.s:1918: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie test_objmgr.o blast_test_util.o blast_unit_test.o bl2seq_unit_test.o gencode_singleton_unit_test.o blastoptions_unit_test.o blastfilter_unit_test.o uniform_search_unit_test.o remote_blast_unit_test.o aascan_unit_test.o ntscan_unit_test.o version_reference_unit_test.o aalookup_unit_test.o subj_ranges_unit_test.o blastengine_unit_test.o linkhsp_unit_test.o blasthits_unit_test.o gapinfo_unit_test.o rps_unit_test.o hspstream_unit_test.o hspstream_test_util.o scoreblk_unit_test.o seqalign_cmp.o seqalign_set_convert.o split_query_unit_test.o phiblast_unit_test.o prelimsearch_unit_test.o psiblast_unit_test.o psibl2seq_unit_test.o traceback_unit_test.o tracebacksearch_unit_test.o msa2pssm_unit_test.o optionshandle_unit_test.o hspfilter_culling_unit_test.o hspfilter_besthit_unit_test.o psiblast_iteration_unit_test.o pssmcreate_unit_test.o blastdiag_unit_test.o blastextend_unit_test.o blastsetup_unit_test.o pssmenginefreqratios_unit_test.o querydata_unit_test.o queryinfo_unit_test.o redoalignment_unit_test.o search_strategy_unit_test.o setupfactory_unit_test.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o seqinfosrc_unit_test.o ntlookup_unit_test.o seqsrc_unit_test.o seqsrc_mock.o pssm_test_util.o pssmcreate_cdd_unit_test.o delta_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lnsl -lz -lbz2 -ldl -lm -lpthread -o blast_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blast_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blast_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blast_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccn2j2OR.s: Assembler messages:
/tmp/ccn2j2OR.s:1723: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:1733: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:1750: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:1814: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:1824: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:1841: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2391: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2400: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2417: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2526: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2535: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:2552: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4162: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4172: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4189: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4343: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4353: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4370: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4914: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4924: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:4941: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5044: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5054: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5071: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5562: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5571: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5588: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5692: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5702: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5719: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5824: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5834: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:5851: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6183: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6193: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6210: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6255: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6265: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6282: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6435: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6445: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6462: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6507: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6517: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6534: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6797: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6807: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:6824: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:7225: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:7235: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:7252: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8778: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8788: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8805: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8838: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8848: Warning: swp{b} use is deprecated for this architecture
/tmp/ccn2j2OR.s:8865: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc44azq7.s: Assembler messages:
/tmp/cc44azq7.s:2449: Warning: swp{b} use is deprecated for this architecture
/tmp/cc44azq7.s:2459: Warning: swp{b} use is deprecated for this architecture
/tmp/cc44azq7.s:2476: Warning: swp{b} use is deprecated for this architecture
/tmp/cc44azq7.s:2540: Warning: swp{b} use is deprecated for this architecture
/tmp/cc44azq7.s:2550: Warning: swp{b} use is deprecated for this architecture
/tmp/cc44azq7.s:2567: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp: In member function 'void blast_archive::BuildArchiveWithDB::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:79:43: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp: In member function 'void blast_archive::BuildArchiveWithBl2seq::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:118:43: warning: 'CObjMgrFree_QueryFactory' is deprecated (declared at /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51) [-Wdeprecated-declarations]
/tmp/ccPCcESC.s: Assembler messages:
/tmp/ccPCcESC.s:870: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:880: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:897: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:962: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:972: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:989: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2409: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2418: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2435: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2553: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2562: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2579: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2769: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2779: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:2796: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3102: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3111: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3128: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3177: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3186: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3203: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3290: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3300: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:3317: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:4405: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:4414: Warning: swp{b} use is deprecated for this architecture
/tmp/ccPCcESC.s:4431: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccBVrN0K.s: Assembler messages:
/tmp/ccBVrN0K.s:2544: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:2554: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:2571: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:2636: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:2646: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:2663: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3577: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3586: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3603: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3727: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3736: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:3753: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4062: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4071: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4088: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4138: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4147: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:4164: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5090: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5099: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5116: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5225: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5234: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5251: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5360: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5369: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5386: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5510: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5519: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5536: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5908: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5917: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:5934: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6022: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6031: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6048: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6098: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6107: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6124: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6173: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6182: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:6199: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7124: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7133: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7150: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7356: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7366: Warning: swp{b} use is deprecated for this architecture
/tmp/ccBVrN0K.s:7383: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o blast_format_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blast_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blast_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blast_format_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include -I../ /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cciP9gOl.s: Assembler messages:
/tmp/cciP9gOl.s:1568: Warning: swp{b} use is deprecated for this architecture
/tmp/cciP9gOl.s:1578: Warning: swp{b} use is deprecated for this architecture
/tmp/cciP9gOl.s:1595: Warning: swp{b} use is deprecated for this architecture
/tmp/cciP9gOl.s:1660: Warning: swp{b} use is deprecated for this architecture
/tmp/cciP9gOl.s:1670: Warning: swp{b} use is deprecated for this architecture
/tmp/cciP9gOl.s:1687: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie bdbloader_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lnsl -lz -lbz2 -ldl -lm -lpthread -o bdbloader_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f bdbloader_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f bdbloader_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/bdbloader_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In function 'void s_TestPartialAmbigRange(ncbi::CSeqDB&, int, int, int)':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:78:18: warning: variable 'wholeL' set but not used [-Wunused-but-set-variable]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::OidRanges::test_method()':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:1525:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
/tmp/cceejOw9.s: Assembler messages:
/tmp/cceejOw9.s:7419: Warning: swp{b} use is deprecated for this architecture
/tmp/cceejOw9.s:7428: Warning: swp{b} use is deprecated for this architecture
/tmp/cceejOw9.s:7445: Warning: swp{b} use is deprecated for this architecture
/tmp/cceejOw9.s:7490: Warning: swp{b} use is deprecated for this architecture
/tmp/cceejOw9.s:7499: Warning: swp{b} use is deprecated for this architecture
/tmp/cceejOw9.s:7516: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seqdb_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -o seqdb_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f seqdb_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f seqdb_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/seqdb_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd app/blast/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast -w all
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/legacy_blast.pl
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast -w all
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/update_blastdb.pl
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=blast_app_util -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blast_app_util.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp
ar cr libblast_app_util.a blast_app_util.o
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libblast_app_util.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libblast_app_util.a /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libblast_app_util.a
ln -f .blast_app_util.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.blast_app_util.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=blast_formatter -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blast_formatter.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blast_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blast_formatter
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blast_formatter /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blast_formatter /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blast_formatter
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=blastn -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastn_app.cpp -o blastn_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastn_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastn
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastn
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=blastp -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastp_app.cpp -o blastp_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastp_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastp_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastp
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastp /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastp /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastp
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=blastx -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastx_app.cpp -o blastx_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/blastx_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastx
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastx /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastx /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastx
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=deltablast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/deltablast_app.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie deltablast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o deltablast
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f deltablast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f deltablast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/deltablast
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=psiblast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/psiblast_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie psiblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o psiblast
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f psiblast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f psiblast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/psiblast
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=rpsblast -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/rpsblast_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie rpsblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o rpsblast
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f rpsblast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f rpsblast /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/rpsblast
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=rpstblastn -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/rpstblastn_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie rpstblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o rpstblastn
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f rpstblastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f rpstblastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/rpstblastn
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=seedtop -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/seedtop_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seedtop_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o seedtop
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f seedtop /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f seedtop /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/seedtop
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=tblastn -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/tblastn_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie tblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o tblastn
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f tblastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f tblastn /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/tblastn
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast TMPL=tblastx -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blast/tblastx_app.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie tblastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o tblastx
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f tblastx /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f tblastx /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/tblastx
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/build_db.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:39:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libwritedb.so .libwritedb.so.stamp
/usr/bin/g++ -shared -o libwritedb.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libwritedb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libwritedb.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libwritedb.so
ln -f .writedb.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.writedb.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
cd app/blastdb/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=blastdb_aliastool -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdb_aliastool.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastdb_aliastool.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastdb_aliastool
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastdb_aliastool /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastdb_aliastool /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastdb_aliastool
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=blastdbcheck -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastdbcheck.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastdbcheck
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastdbcheck /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastdbcheck /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastdbcheck
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=blastdbcmd -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcmd.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastdbcmd.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastdbcmd
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastdbcmd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastdbcmd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastdbcmd
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=blastdbcp -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/blastdbcp.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blastdbcp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lwritedb -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxconnext -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o blastdbcp
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastdbcp /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastdbcp /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastdbcp
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=convert2blastmask -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie convert2blastmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqmasks_io -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o convert2blastmask
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f convert2blastmask /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f convert2blastmask /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/convert2blastmask
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=makeblastdb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/makeblastdb.cpp:41:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_writer/build_db.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lwritedb -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o makeblastdb
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f makeblastdb /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f makeblastdb /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/makeblastdb
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb TMPL=makeprofiledb -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/blastdb/makeprofiledb.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie makeprofiledb.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lblastxml -lxcgi -lxhtml -lwritedb -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -ldl -lnsl -lm -lpthread -o makeprofiledb
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f makeprofiledb /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f makeprofiledb /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/makeprofiledb
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
cd app/dustmasker/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
cd app/dustmasker/ && /usr/bin/make -w APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker TMPL=dustmasker -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker/main.cpp -o main.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/dustmasker/dust_mask_app.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie main.o dust_mask_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lxobjutil -lxobjread -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o dustmasker
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f dustmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f dustmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/dustmasker
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
cd algo/segmask/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
cd algo/segmask/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/segmask TMPL=xalgosegmask -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/segmask/segmask.cpp -o segmask.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp
/usr/bin/g++ -shared -o libxalgosegmask.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O segmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libxalgosegmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libxalgosegmask.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libxalgosegmask.so
ln -f .xalgosegmask.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.xalgosegmask.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
cd app/segmasker/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
cd app/segmasker/ && /usr/bin/make -w APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/segmasker TMPL=segmasker -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/segmasker/segmasker.cpp -o segmasker.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie segmasker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjsimple -lseqmasks_io -lxalgosegmask -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o segmasker
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f segmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f segmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/segmasker
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
cd app/winmasker/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker -w all
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/windowmasker_2.2.22_adapter.py
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
cd app/winmasker/ && /usr/bin/make -w APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker TMPL=winmasker -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/main.cpp -o main.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_app.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/main.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/algo/dustmask/symdust.hpp:45:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqdb -lblastdb -lseqmasks_io -ltables -lxobjread -lvariation -lcreaders -lxobjread -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o windowmasker
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f windowmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f windowmasker /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/windowmasker
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
cd objmgr/split/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
cd objmgr/split/ && /usr/bin/make -w APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split TMPL=id2_split -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/blob_splitter.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/blob_splitter_params.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_params.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/split_blob.cpp -o split_blob.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/split_blob.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/id_range.cpp -o id_range.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/id_range.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/object_splitinfo.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/asn_sizer.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/annot_piece.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/chunk_info.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/size.cpp -o size.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objmgr/split/size.hpp:38,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/size.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o
/bin/rm -f libid2_split.so .libid2_split.so.stamp
/usr/bin/g++ -shared -o libid2_split.so -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -lm -lpthread
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f libid2_split.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib
ln -f libid2_split.so /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib/libid2_split.so
ln -f .id2_split.dep /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/status/.id2_split.dep
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
cd objtools/align_format/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/align_format/unit_test/ && /usr/bin/make -w APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cciMyyHM.s: Assembler messages:
/tmp/cciMyyHM.s:1786: Warning: swp{b} use is deprecated for this architecture
/tmp/cciMyyHM.s:1796: Warning: swp{b} use is deprecated for this architecture
/tmp/cciMyyHM.s:1813: Warning: swp{b} use is deprecated for this architecture
/tmp/cciMyyHM.s:1878: Warning: swp{b} use is deprecated for this architecture
/tmp/cciMyyHM.s:1888: Warning: swp{b} use is deprecated for this architecture
/tmp/cciMyyHM.s:1905: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cc0DkAzQ.s: Assembler messages:
/tmp/cc0DkAzQ.s:2015: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:2024: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:2041: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:2086: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:2095: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:2112: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4108: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4117: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4134: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4249: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4258: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4275: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4388: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4397: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4414: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4527: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4536: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4553: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4666: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4675: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4692: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4804: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4813: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:4830: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5255: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5264: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5281: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5330: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5339: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5356: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5405: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5414: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5431: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5480: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5489: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5506: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5554: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5564: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5581: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5628: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5637: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:5654: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6421: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6431: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6448: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6513: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6522: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6539: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6930: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6940: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:6957: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:7022: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:7031: Warning: swp{b} use is deprecated for this architecture
/tmp/cc0DkAzQ.s:7048: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccpEdxsy.s: Assembler messages:
/tmp/ccpEdxsy.s:1826: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:1835: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:1852: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:1897: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:1906: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:1923: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2089: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2098: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2115: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2275: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2285: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2302: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2412: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2422: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2439: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2548: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2558: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2575: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2707: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2717: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2734: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2778: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2788: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2805: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2849: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2859: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2876: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2944: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2952: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:2969: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3261: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3270: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3287: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3447: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3456: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3473: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3587: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3596: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3613: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3721: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3731: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3748: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3792: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3802: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3819: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3888: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3896: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpEdxsy.s:3913: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccpdmszQ.s: Assembler messages:
/tmp/ccpdmszQ.s:1559: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpdmszQ.s:1569: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpdmszQ.s:1586: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpdmszQ.s:1650: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpdmszQ.s:1660: Warning: swp{b} use is deprecated for this architecture
/tmp/ccpdmszQ.s:1677: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbitime.hpp:59,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cct0XV6O.s: Assembler messages:
/tmp/cct0XV6O.s:1496: Warning: swp{b} use is deprecated for this architecture
/tmp/cct0XV6O.s:1506: Warning: swp{b} use is deprecated for this architecture
/tmp/cct0XV6O.s:1523: Warning: swp{b} use is deprecated for this architecture
/tmp/cct0XV6O.s:1587: Warning: swp{b} use is deprecated for this architecture
/tmp/cct0XV6O.s:1597: Warning: swp{b} use is deprecated for this architecture
/tmp/cct0XV6O.s:1614: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lcreaders -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnext -lxconnect -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o align_format_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f align_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f align_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/align_format_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccmcBljR.s: Assembler messages:
/tmp/ccmcBljR.s:1829: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmcBljR.s:1839: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmcBljR.s:1856: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmcBljR.s:1920: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmcBljR.s:1930: Warning: swp{b} use is deprecated for this architecture
/tmp/ccmcBljR.s:1947: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seq_writer_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -o blastdb_format_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blastdb_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blastdb_format_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blastdb_format_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie gene_info_reader_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o gene_info_reader
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f gene_info_reader /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f gene_info_reader /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/gene_info_reader
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccdiE7VK.s: Assembler messages:
/tmp/ccdiE7VK.s:2411: Warning: swp{b} use is deprecated for this architecture
/tmp/ccdiE7VK.s:2421: Warning: swp{b} use is deprecated for this architecture
/tmp/ccdiE7VK.s:2438: Warning: swp{b} use is deprecated for this architecture
/tmp/ccdiE7VK.s:2502: Warning: swp{b} use is deprecated for this architecture
/tmp/ccdiE7VK.s:2512: Warning: swp{b} use is deprecated for this architecture
/tmp/ccdiE7VK.s:2529: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie gene_info_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f gene_info_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f gene_info_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/gene_info_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seqdb_demo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o seqdb_demo
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f seqdb_demo /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f seqdb_demo /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/seqdb_demo
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:40:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie seqdb_perf.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o seqdb_perf
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f seqdb_perf /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f seqdb_perf /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/seqdb_perf
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/ccYeZCzi.s: Assembler messages:
/tmp/ccYeZCzi.s:2749: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYeZCzi.s:2758: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYeZCzi.s:2775: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYeZCzi.s:2820: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYeZCzi.s:2829: Warning: swp{b} use is deprecated for this architecture
/tmp/ccYeZCzi.s:2846: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie writedb_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lxobjutil -lcreaders -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lnsl -ldl -lm -lpthread -o writedb_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f writedb_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f writedb_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/writedb_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w sources
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Nothing to be done for `sources'.
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/make -f /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w all
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/g++ -c -Wall -Wno-format-y2k -pthread -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/inc -I/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o
In file included from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/objtools/blast/services/blast_services.hpp:36,
from /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(const ncbi::CTempString&, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4229:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(const ncbi::CTempString&, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t, ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/include/corelib/ncbistr.hpp:4250:82: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
/tmp/cccuKpmy.s: Assembler messages:
/tmp/cccuKpmy.s:1761: Warning: swp{b} use is deprecated for this architecture
/tmp/cccuKpmy.s:1770: Warning: swp{b} use is deprecated for this architecture
/tmp/cccuKpmy.s:1787: Warning: swp{b} use is deprecated for this architecture
/tmp/cccuKpmy.s:1832: Warning: swp{b} use is deprecated for this architecture
/tmp/cccuKpmy.s:1841: Warning: swp{b} use is deprecated for this architecture
/tmp/cccuKpmy.s:1858: Warning: swp{b} use is deprecated for this architecture
/usr/bin/g++ -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -Wl,-E -fPIE -pie blast_services_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -L/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lnsl -lz -lbz2 -ldl -lm -lpthread -o blast_services_unit_test
/bin/bash /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/scripts/common/impl/if_diff.sh ln -f blast_services_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin
ln -f blast_services_unit_test /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/bin/blast_services_unit_test
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
debian/rules override_dh_auto_test
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
dh_auto_test
make[2]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++'
if test -s ""; then \
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build && /usr/bin/make -w check_p RUN_CHECK=Y; \
else \
cd /build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build && /usr/bin/make -w check_r RUN_CHECK=Y; \
fi
make[3]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
======================================================================
make[4]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
/usr/bin/make -C corelib -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/corelib'
/usr/bin/make -C util -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/make -C regexp -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/regexp'
/usr/bin/make -C xregexp -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/xregexp'
/usr/bin/make -C compress -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress'
/usr/bin/make -C bzip2 -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/bzip2'
NOTE: Skipping project bzip2 due to unmet requirements:
LocalBZ2
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -C zlib -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/zlib'
NOTE: Skipping project zlib due to unmet requirements:
LocalZ
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress/api'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/compress'
echo 'Warning: non-existent sub-project "image"'
Warning: non-existent sub-project "image"
/usr/bin/make -C tables -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/tables'
/usr/bin/make -C creaders -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/creaders'
/usr/bin/make -C sequtil -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/sequtil'
/usr/bin/make -C bitset -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/bitset'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util/bitset'
echo 'Warning: non-existent sub-project "qparse"'
Warning: non-existent sub-project "qparse"
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/util'
/usr/bin/make -C connect -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
echo 'Warning: non-existent sub-project "services"'
Warning: non-existent sub-project "services"
/usr/bin/make -C ext -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect/ext'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "daemons"'
Warning: non-existent sub-project "daemons"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/connect'
/usr/bin/make -C cgi -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/cgi'
/usr/bin/make -C html -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/html'
/usr/bin/make -C build-system -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system'
/usr/bin/make -C project_tree_builder -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
SKIP -- build-system/project_tree_builder/project_tree_builder
/usr/bin/make -C msbuild -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder/msbuild'
NOTE: Skipping project msbuild due to unmet requirements:
MSWin
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system/project_tree_builder'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/build-system'
/usr/bin/make -C serial -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
/usr/bin/make -C datatool -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
TEST -- serial/datatool/datatool
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial/datatool'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "soap"'
Warning: non-existent sub-project "soap"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/serial'
echo 'Warning: non-existent sub-project "db"'
Warning: non-existent sub-project "db"
echo 'Warning: non-existent sub-project "dbapi"'
Warning: non-existent sub-project "dbapi"
/usr/bin/make -C objects -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects'
/usr/bin/make -C general -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/general'
/usr/bin/make -C biblio -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biblio'
/usr/bin/make -C medline -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medline'
/usr/bin/make -C pub -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pub'
/usr/bin/make -C seqcode -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqcode'
/usr/bin/make -C seq -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seq'
/usr/bin/make -C seqset -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqset'
/usr/bin/make -C submit -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/submit'
/usr/bin/make -C seqedit -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqedit'
/usr/bin/make -C seqsplit -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id1'
/usr/bin/make -C id2 -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/id2'
/usr/bin/make -C entrez2 -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrez2'
/usr/bin/make -C pubmed -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pubmed'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pubmed'
/usr/bin/make -C medlars -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medlars'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/medlars'
/usr/bin/make -C mla -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mla'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mla'
/usr/bin/make -C proj -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/proj'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/proj'
/usr/bin/make -C scoremat -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/scoremat'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blast'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastdb'
/usr/bin/make -C blastxml -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/blastxml'
/usr/bin/make -C mmdb -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mmdb'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mmdb'
/usr/bin/make -C cn3d -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/cn3d'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/cn3d'
/usr/bin/make -C cdd -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/cdd'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/cdd'
/usr/bin/make -C ncbimime -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/ncbimime'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/ncbimime'
/usr/bin/make -C pcsubstance -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pcsubstance'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pcsubstance'
/usr/bin/make -C pcassay -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pcassay'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/pcassay'
/usr/bin/make -C gbseq -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/gbseq'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/gbseq'
/usr/bin/make -C insdseq -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/insdseq'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/insdseq'
/usr/bin/make -C tinyseq -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/tinyseq'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/tinyseq'
/usr/bin/make -C biotree -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biotree'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/biotree'
/usr/bin/make -C entrezgene -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrezgene'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/entrezgene'
/usr/bin/make -C omssa -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/omssa'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/omssa'
/usr/bin/make -C remap -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/remap'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/remap'
/usr/bin/make -C seqtest -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqtest'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/seqtest'
/usr/bin/make -C taxon1 -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon1'
/usr/bin/make -C taxon3 -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon3'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/taxon3'
/usr/bin/make -C trackmgr -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/trackmgr'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/trackmgr'
/usr/bin/make -C valerr -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/valerr'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/valerr'
/usr/bin/make -C valid -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/valid'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/valid'
/usr/bin/make -C access -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/access'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/access'
/usr/bin/make -C docsum -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/docsum'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/docsum'
/usr/bin/make -C featdef -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/featdef'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/featdef'
/usr/bin/make -C genomecoll -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C homologene -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/homologene'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/homologene'
/usr/bin/make -C mim -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mim'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/mim'
/usr/bin/make -C objprt -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/objprt'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/objprt'
/usr/bin/make -C variation -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/variation'
/usr/bin/make -C macro -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/macro'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects/macro'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objects'
/usr/bin/make -C objmgr -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/usr/bin/make -C util -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/util'
/usr/bin/make -C split -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr/split'
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objmgr'
/usr/bin/make -C objtools -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools'
/usr/bin/make -C readers -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
echo 'Warning: non-existent sub-project "app"'
Warning: non-existent sub-project "app"
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/readers'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -C test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C seqdb_writer -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C gene_info_reader -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/gene_info_reader'
echo 'Warning: non-existent sub-project "gene_info_writer"'
Warning: non-existent sub-project "gene_info_writer"
/usr/bin/make -C services -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
SKIP -- objtools/blast/services/unit_test/blast_services_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services/unit_test'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C blastdb_format -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast/blastdb_format'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/blast'
echo 'Warning: non-existent sub-project "lds"'
Warning: non-existent sub-project "lds"
echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C data_loaders -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C genbank -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -C cache -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[8]: Nothing to be done for `check_add_r'.
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -C pubseq -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/pubseq'
NOTE: Skipping project pubseq due to unmet requirements:
PubSeqOS
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/pubseq'
/usr/bin/make -C id2 -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[8]: Nothing to be done for `check_add_r'.
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[8]: Nothing to be done for `check_add_r'.
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -C pubseq2 -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/pubseq2'
NOTE: Skipping project pubseq2 due to unmet requirements:
PubSeqOS
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/pubseq2'
/usr/bin/make -C gicache -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[8]: Nothing to be done for `check_add_r'.
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/genbank'
echo 'Warning: non-existent sub-project "lds"'
Warning: non-existent sub-project "lds"
echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders/blastdb'
echo 'Warning: non-existent sub-project "cdd"'
Warning: non-existent sub-project "cdd"
echo 'Warning: non-existent sub-project "trace"'
Warning: non-existent sub-project "trace"
echo 'Warning: non-existent sub-project "patcher"'
Warning: non-existent sub-project "patcher"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C simple -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/simple'
/usr/bin/make -C alnmgr -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/alnmgr'
echo 'Warning: non-existent sub-project "cddalignview"'
Warning: non-existent sub-project "cddalignview"
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
echo 'Warning: non-existent sub-project "manip"'
Warning: non-existent sub-project "manip"
/usr/bin/make -C format -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/format'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/format'
echo 'Warning: non-existent sub-project "validator"'
Warning: non-existent sub-project "validator"
echo 'Warning: non-existent sub-project "asniotest"'
Warning: non-existent sub-project "asniotest"
echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
echo 'Warning: non-existent sub-project "edit"'
Warning: non-existent sub-project "edit"
echo 'Warning: non-existent sub-project "writers"'
Warning: non-existent sub-project "writers"
/usr/bin/make -C cleanup -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/cleanup'
echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -C seqmasks_io -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/seqmasks_io'
echo 'Warning: non-existent sub-project "eutils"'
Warning: non-existent sub-project "eutils"
/usr/bin/make -C align_format -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
TEST -- objtools/align_format/unit_test/align_format_unit_test
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format/unit_test'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools/align_format'
echo 'Warning: non-existent sub-project "snputil"'
Warning: non-existent sub-project "snputil"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/objtools'
echo 'Warning: non-existent sub-project "ctools"'
Warning: non-existent sub-project "ctools"
/usr/bin/make -C algo -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo'
/usr/bin/make -C dustmask -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/dustmask'
/usr/bin/make -C winmask -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/winmask'
echo 'Warning: non-existent sub-project "sequence"'
Warning: non-existent sub-project "sequence"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast'
/usr/bin/make -C composition_adjustment -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -C core -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/core'
/usr/bin/make -C dbindex -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -C makeindex -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
SKIP -- algo/blast/dbindex/makeindex/makeindex
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/dbindex'
echo 'Warning: non-existent sub-project "dbindex_search"'
Warning: non-existent sub-project "dbindex_search"
/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/api'
/usr/bin/make -C format -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/format'
/usr/bin/make -C blastinput -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput/unit_test'
echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C igblast -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
make[7]: Nothing to be done for `check_add_r'.
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/igblast'
echo 'Warning: non-existent sub-project "gumbel_params"'
Warning: non-existent sub-project "gumbel_params"
/usr/bin/make -C unit_tests -w check_add_r || exit 5
make[7]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests'
/usr/bin/make -C blast_format -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -C api -w check_add_r || exit 5
make[8]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
TEST -- algo/blast/unit_tests/api/blast_unit_test
make[8]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests/api'
make[7]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast/unit_tests'
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/blast'
/usr/bin/make -C segmask -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
make[6]: Nothing to be done for `check_add_r'.
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo/segmask'
echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
echo 'Warning: non-existent sub-project "structure"'
Warning: non-existent sub-project "structure"
echo 'Warning: non-existent sub-project "ms"'
Warning: non-existent sub-project "ms"
echo 'Warning: non-existent sub-project "gnomon"'
Warning: non-existent sub-project "gnomon"
echo 'Warning: non-existent sub-project "tree"'
Warning: non-existent sub-project "tree"
echo 'Warning: non-existent sub-project "phy_tree"'
Warning: non-existent sub-project "phy_tree"
echo 'Warning: non-existent sub-project "seqqa"'
Warning: non-existent sub-project "seqqa"
echo 'Warning: non-existent sub-project "cobalt"'
Warning: non-existent sub-project "cobalt"
echo 'Warning: non-existent sub-project "text"'
Warning: non-existent sub-project "text"
echo 'Warning: non-existent sub-project "volume_merge"'
Warning: non-existent sub-project "volume_merge"
echo 'Warning: non-existent sub-project "primer"'
Warning: non-existent sub-project "primer"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/algo'
echo 'Warning: non-existent sub-project "misc"'
Warning: non-existent sub-project "misc"
echo 'Warning: non-existent sub-project "gui"'
Warning: non-existent sub-project "gui"
/usr/bin/make -C app -w check_add_r || exit 5
make[5]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app'
echo 'Warning: non-existent sub-project "asn2asn"'
Warning: non-existent sub-project "asn2asn"
echo 'Warning: non-existent sub-project "asn2fasta"'
Warning: non-existent sub-project "asn2fasta"
echo 'Warning: non-existent sub-project "asn2flat"'
Warning: non-existent sub-project "asn2flat"
echo 'Warning: non-existent sub-project "asnval"'
Warning: non-existent sub-project "asnval"
echo 'Warning: non-existent sub-project "id1_fetch"'
Warning: non-existent sub-project "id1_fetch"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
SKIP -- app/blast/blastp
SKIP -- app/blast/blastn
SKIP -- app/blast/blastx
SKIP -- app/blast/tblastn
SKIP -- app/blast/tblastx
SKIP -- app/blast/psiblast
SKIP -- app/blast/rpsblast
SKIP -- app/blast/rpstblastn
SKIP -- app/blast/blast_formatter
SKIP -- app/blast/deltablast
SKIP -- app/blast/seedtop
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blast'
echo 'Warning: non-existent sub-project "convert_seq"'
Warning: non-existent sub-project "convert_seq"
echo 'Warning: non-existent sub-project "nmer_repeats"'
Warning: non-existent sub-project "nmer_repeats"
echo 'Warning: non-existent sub-project "objmgr"'
Warning: non-existent sub-project "objmgr"
echo 'Warning: non-existent sub-project "gi2taxid"'
Warning: non-existent sub-project "gi2taxid"
echo 'Warning: non-existent sub-project "netschedule"'
Warning: non-existent sub-project "netschedule"
echo 'Warning: non-existent sub-project "grid"'
Warning: non-existent sub-project "grid"
echo 'Warning: non-existent sub-project "igblast"'
Warning: non-existent sub-project "igblast"
/usr/bin/make -C winmasker -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
SKIP -- app/winmasker/winmasker
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/winmasker'
/usr/bin/make -C dustmasker -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
SKIP -- app/dustmasker/dustmasker
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/dustmasker'
/usr/bin/make -C segmasker -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
SKIP -- app/segmasker/segmasker
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/segmasker'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
SKIP -- app/blastdb/blastdbcmd
SKIP -- app/blastdb/makeblastdb
SKIP -- app/blastdb/blastdb_aliastool
SKIP -- app/blastdb/blastdbcheck
SKIP -- app/blastdb/convert2blastmask
SKIP -- app/blastdb/blastdbcp
SKIP -- app/blastdb/makeprofiledb
make[6]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app/blastdb'
echo 'Warning: non-existent sub-project "agpconvert"'
Warning: non-existent sub-project "agpconvert"
echo 'Warning: non-existent sub-project "id2_fetch"'
Warning: non-existent sub-project "id2_fetch"
echo 'Warning: non-existent sub-project "agp_validate"'
Warning: non-existent sub-project "agp_validate"
echo 'Warning: non-existent sub-project "objextract"'
Warning: non-existent sub-project "objextract"
echo 'Warning: non-existent sub-project "lds_indexer"'
Warning: non-existent sub-project "lds_indexer"
echo 'Warning: non-existent sub-project "bdb_env_keeper"'
Warning: non-existent sub-project "bdb_env_keeper"
echo 'Warning: non-existent sub-project "nw_aligner"'
Warning: non-existent sub-project "nw_aligner"
echo 'Warning: non-existent sub-project "speedtest"'
Warning: non-existent sub-project "speedtest"
echo 'Warning: non-existent sub-project "idmapper"'
Warning: non-existent sub-project "idmapper"
echo 'Warning: non-existent sub-project "formatguess"'
Warning: non-existent sub-project "formatguess"
echo 'Warning: non-existent sub-project "multireader"'
Warning: non-existent sub-project "multireader"
echo 'Warning: non-existent sub-project "read_blast_result"'
Warning: non-existent sub-project "read_blast_result"
echo 'Warning: non-existent sub-project "splign"'
Warning: non-existent sub-project "splign"
echo 'Warning: non-existent sub-project "hfilter"'
Warning: non-existent sub-project "hfilter"
echo 'Warning: non-existent sub-project "annotwriter"'
Warning: non-existent sub-project "annotwriter"
echo 'Warning: non-existent sub-project "compart"'
Warning: non-existent sub-project "compart"
echo 'Warning: non-existent sub-project "streamtest"'
Warning: non-existent sub-project "streamtest"
echo 'Warning: non-existent sub-project "lds2_indexer"'
Warning: non-existent sub-project "lds2_indexer"
echo 'Warning: non-existent sub-project "split_cache"'
Warning: non-existent sub-project "split_cache"
echo 'Warning: non-existent sub-project "wig2table"'
Warning: non-existent sub-project "wig2table"
echo 'Warning: non-existent sub-project "netcache"'
Warning: non-existent sub-project "netcache"
echo 'Warning: non-existent sub-project "rmblastn"'
Warning: non-existent sub-project "rmblastn"
make[5]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build/app'
echo 'Warning: non-existent sub-project "sample"'
Warning: non-existent sub-project "sample"
echo 'Warning: non-existent sub-project "internal"'
Warning: non-existent sub-project "internal"
make[4]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
----------------------------------------------------------------------
Building check script...
Done.
OK -- [serial/datatool] datatool.sh (real 1.53, user 1.10, sys 0.19)
OK -- [serial/datatool] datatool_xml.sh (real 0.25, user 0.10, sys 0.07)
OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.11, user 0.06, sys 0.02)
Succeeded : 3
Timeout : 0
Failed : 0
Absent : 0
******** ALL TESTS COMPLETED SUCCESSFULLY ********
make[3]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++/BUILD/build'
make[2]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28/c++'
c++/BUILD/build/check.sh concat_err
cat c++/BUILD/build/check.sh.out_err
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
fakeroot debian/rules binary-arch
dh binary-arch -Dc++ --with autotools_dev --with quilt
dh_testroot -a -O-Dc\+\+
dh_prep -a -O-Dc\+\+
dh_installdirs -a -O-Dc\+\+
debian/rules override_dh_auto_install
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/
cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
debian/rules override_dh_install
make[1]: Entering directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
# dh_install
mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+
mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+
mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast
mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb
mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \
debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter
rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \
debian/ncbi-blast+/usr/bin/datatool \
debian/ncbi-blast+/usr/bin/project_tree_builder \
debian/ncbi-blast+/usr/lib/ncbi-blast+/libtest_*.so
if test -d debian/ncbi-blast+-legacy/usr/share/ncbi-blast+/bin; then cp debian/legacy/legacy.sh debian/ncbi-blast+-legacy/usr/share/ncbi-blast+/bin/; fi
make[1]: Leaving directory `/build/ncbi-blast+-ZClXTI/ncbi-blast+-2.2.28'
dh_installdocs -a -O-Dc\+\+
dh_installchangelogs -a -O-Dc\+\+
dh_installexamples -a -O-Dc\+\+
dh_installman -a -O-Dc\+\+
dh_installcatalogs -a -O-Dc\+\+
dh_installcron -a -O-Dc\+\+
dh_installdebconf -a -O-Dc\+\+
dh_installemacsen -a -O-Dc\+\+
dh_installifupdown -a -O-Dc\+\+
dh_installinfo -a -O-Dc\+\+
dh_installinit -a -O-Dc\+\+
dh_installmenu -a -O-Dc\+\+
dh_installmime -a -O-Dc\+\+
dh_installmodules -a -O-Dc\+\+
dh_installlogcheck -a -O-Dc\+\+
dh_installlogrotate -a -O-Dc\+\+
dh_installpam -a -O-Dc\+\+
dh_installppp -a -O-Dc\+\+
dh_installudev -a -O-Dc\+\+
dh_installwm -a -O-Dc\+\+
dh_installxfonts -a -O-Dc\+\+
dh_installgsettings -a -O-Dc\+\+
dh_bugfiles -a -O-Dc\+\+
dh_ucf -a -O-Dc\+\+
dh_lintian -a -O-Dc\+\+
dh_gconf -a -O-Dc\+\+
dh_icons -a -O-Dc\+\+
dh_perl -a -O-Dc\+\+
dh_usrlocal -a -O-Dc\+\+
dh_link -a -O-Dc\+\+
dh_compress -a -O-Dc\+\+
dh_fixperms -a -O-Dc\+\+
dh_strip -a -O-Dc\+\+
dh_makeshlibs -a -O-Dc\+\+
dh_shlibdeps -a -O-Dc\+\+
dh_installdeb -a -O-Dc\+\+
dh_gencontrol -a -O-Dc\+\+
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O-Dc\+\+
dh_builddeb -a -O-Dc\+\+
dpkg-deb: building package `ncbi-blast+' in `../ncbi-blast+_2.2.28-2_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../ncbi-blast+_2.2.28-2_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build ncbi-blast+-2.2.28
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20130620-1802
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
ncbi-blast+_2.2.28-2_armhf.changes:
───────────────────────────────────
Format: 1.8
Date: Sun, 02 Jun 2013 23:00:44 -0400
Source: ncbi-blast+
Binary: ncbi-blast+ ncbi-blast+-legacy
Architecture: armhf
Version: 2.2.28-2
Distribution: jessie-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Aaron M. Ucko <ucko@debian.org>
Description:
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Closes: 710807
Changes:
ncbi-blast+ (2.2.28-2) unstable; urgency=low
.
* debian/patches/use_pie_for_apps: Explicitly build all executables with
-fPIE -pie, to avoid giving project_tree_builder a partial PIE
treatment that now fails on mips and mipsel. (Closes: #710807.)
* debian/rules: Retire redundant APP_LDFLAGS override.
* Standards-Version: 3.9.4. (Already compliant.)
Checksums-Sha1:
de0ca2e12b6ecc657f09fad81f5e409c5dba39f1 10011558 ncbi-blast+_2.2.28-2_armhf.deb
Checksums-Sha256:
9b96b7f653898a9da2eb46288af6ce7a87f32532e77ffe77831ad6036a4e2430 10011558 ncbi-blast+_2.2.28-2_armhf.deb
Files:
013d198b00bf19083517cc34a8b9af8f 10011558 science optional ncbi-blast+_2.2.28-2_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
ncbi-blast+_2.2.28-2_armhf.deb
──────────────────────────────
new debian package, version 2.0.
size 10011558 bytes: control archive=3577 bytes.
1197 bytes, 24 lines control
6259 bytes, 95 lines md5sums
Package: ncbi-blast+
Version: 2.2.28-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 27092
Depends: ncbi-data, python, perl, libbz2-1.0, libc6 (>= 2.15), libgcc1 (>= 1:4.4.0), libpcre3 (>= 8.10), libstdc++6 (>= 4.6), zlib1g (>= 1:1.2.0)
Enhances: t-coffee
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.
drwxr-xr-x root/root 0 2013-06-20 17:59 ./
drwxr-xr-x root/root 0 2013-06-20 17:59 ./usr/
drwxr-xr-x root/root 0 2013-06-20 17:59 ./usr/bin/
-rwxr-xr-x root/root 51346 2013-06-20 17:59 ./usr/bin/legacy_blast
-rwxr-xr-x root/root 11993 2013-06-20 17:59 ./usr/bin/update_blastdb
-rwxr-xr-x root/root 5950 2013-06-20 17:59 ./usr/bin/windowmasker_2.2.22_adapter
-rwxr-xr-x root/root 177656 2013-06-20 17:59 ./usr/bin/blast_formatter
-rwxr-xr-x root/root 67060 2013-06-20 17:59 ./usr/bin/blastdb_aliastool
-rwxr-xr-x root/root 116212 2013-06-20 17:59 ./usr/bin/blastdbcheck
-rwxr-xr-x root/root 87596 2013-06-20 17:59 ./usr/bin/blastdbcmd
-rwxr-xr-x root/root 46600 2013-06-20 17:59 ./usr/bin/blastdbcp
-rwxr-xr-x root/root 153076 2013-06-20 17:59 ./usr/bin/blastn
-rwxr-xr-x root/root 153076 2013-06-20 17:59 ./usr/bin/blastp
-rwxr-xr-x root/root 153076 2013-06-20 17:59 ./usr/bin/blastx
-rwxr-xr-x root/root 42484 2013-06-20 17:59 ./usr/bin/convert2blastmask
-rwxr-xr-x root/root 173556 2013-06-20 17:59 ./usr/bin/deltablast
-rwxr-xr-x root/root 34292 2013-06-20 17:59 ./usr/bin/dustmasker
-rwxr-xr-x root/root 22004 2013-06-20 17:59 ./usr/bin/gene_info_reader
-rwxr-xr-x root/root 153076 2013-06-20 17:59 ./usr/bin/makeblastdb
-rwxr-xr-x root/root 46580 2013-06-20 17:59 ./usr/bin/makembindex
-rwxr-xr-x root/root 91636 2013-06-20 17:59 ./usr/bin/makeprofiledb
-rwxr-xr-x root/root 177652 2013-06-20 17:59 ./usr/bin/psiblast
-rwxr-xr-x root/root 148980 2013-06-20 17:59 ./usr/bin/rpstblastn
-rwxr-xr-x root/root 34292 2013-06-20 17:59 ./usr/bin/segmasker
-rwxr-xr-x root/root 30196 2013-06-20 17:59 ./usr/bin/seqdb_perf
-rwxr-xr-x root/root 165364 2013-06-20 17:59 ./usr/bin/tblastn
-rwxr-xr-x root/root 153076 2013-06-20 17:59 ./usr/bin/tblastx
-rwxr-xr-x root/root 38388 2013-06-20 17:59 ./usr/bin/windowmasker
-rwxr-xr-x root/root 148980 2013-06-20 17:59 ./usr/bin/rpsblast+
-rwxr-xr-x root/root 148980 2013-06-20 17:59 ./usr/bin/seedtop+
drwxr-xr-x root/root 0 2013-06-20 17:59 ./usr/lib/
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /build/ncbi-blast+-ZClXTI
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 272056
Build-Time: 15698
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 188
Job: ncbi-blast+_2.2.28-2
Machine Architecture: armhf
Package: ncbi-blast+
Package-Time: 15977
Source-Version: 2.2.28-2
Space: 272056
Status: successful
Version: 2.2.28-2
────────────────────────────────────────────────────────────────────────────────
Finished at 20130620-1802
Build needed 04:26:17, 272056k disc space