Raspbian Package Auto-Building

Build log for nanolyse (1.2.0-2+b1) on armhf

nanolyse1.2.0-2+b1armhf → 2021-10-25 23:22:42

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| nanolyse 1.2.0-2+b1 (armhf)                  Mon, 25 Oct 2021 23:13:23 +0000 |
+==============================================================================+

Package: nanolyse
Version: 1.2.0-2+b1
Source Version: 1.2.0-2
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bookworm-staging-armhf-sbuild-2cd107c1-7965-439a-b372-e159e390bd45' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bookworm-staging/main Sources [12.4 MB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf Packages [13.4 MB]
Fetched 25.9 MB in 25s (1025 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'nanolyse' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/nanolyse.git
Please use:
git clone https://salsa.debian.org/med-team/nanolyse.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 40.7 kB of source archives.
Get:1 http://172.17.0.1/private bookworm-staging/main nanolyse 1.2.0-2 (dsc) [1999 B]
Get:2 http://172.17.0.1/private bookworm-staging/main nanolyse 1.2.0-2 (tar) [34.0 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main nanolyse 1.2.0-2 (diff) [4676 B]
Fetched 40.7 kB in 0s (95.2 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/nanolyse-mfPIVV/nanolyse-1.2.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/nanolyse-mfPIVV' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-z4U2tV/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-z4U2tV/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-z4U2tV/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2929 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-z4U2tV/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 42 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (21.5 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12484 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools
dpkg-deb: building package 'sbuild-build-depends-nanolyse-dummy' in '/<<BUILDDIR>>/resolver-z4U2tV/apt_archive/sbuild-build-depends-nanolyse-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-nanolyse-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Sources [511 B]
Get:5 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Packages [592 B]
Fetched 2436 B in 1s (3337 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-z4U2tV/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install nanolyse build dependencies (apt-based resolver)
--------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libffi8 libfile-stripnondeterminism-perl
  libicu67 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
  libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources
  python3-setuptools python3.9 python3.9-minimal sensible-utils
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc dh-make flit python3-toml
  gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc
  python3.9-venv python3.9-doc binfmt-support
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl ca-certificates libltdl-dev
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libffi8 libfile-stripnondeterminism-perl
  libicu67 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
  libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources
  python3-setuptools python3.9 python3.9-minimal
  sbuild-build-depends-nanolyse-dummy sensible-utils
0 upgraded, 48 newly installed, 0 to remove and 42 not upgraded.
Need to get 23.2 MB of archives.
After this operation, 87.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-z4U2tV/apt_archive ./ sbuild-build-depends-nanolyse-dummy 0.invalid.0 [880 B]
Get:2 http://172.17.0.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.2-4 [135 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-7 [793 kB]
Get:5 http://172.17.0.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bookworm-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:7 http://172.17.0.1/private bookworm-staging/main armhf libpython3.9-minimal armhf 3.9.7-4+rpi1 [794 kB]
Get:8 http://172.17.0.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.1-2 [80.3 kB]
Get:9 http://172.17.0.1/private bookworm-staging/main armhf python3.9-minimal armhf 3.9.7-4+rpi1 [1632 kB]
Get:10 http://172.17.0.1/private bookworm-staging/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB]
Get:11 http://172.17.0.1/private bookworm-staging/main armhf media-types all 4.0.0 [30.3 kB]
Get:12 http://172.17.0.1/private bookworm-staging/main armhf libffi8 armhf 3.4.2-3 [21.3 kB]
Get:13 http://172.17.0.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:14 http://172.17.0.1/private bookworm-staging/main armhf libpython3.9-stdlib armhf 3.9.7-4+rpi1 [1618 kB]
Get:15 http://172.17.0.1/private bookworm-staging/main armhf python3.9 armhf 3.9.7-4+rpi1 [480 kB]
Get:16 http://172.17.0.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB]
Get:17 http://172.17.0.1/private bookworm-staging/main armhf python3 armhf 3.9.2-3 [37.9 kB]
Get:18 http://172.17.0.1/private bookworm-staging/main armhf sensible-utils all 0.0.17 [21.5 kB]
Get:19 http://172.17.0.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:20 http://172.17.0.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:21 http://172.17.0.1/private bookworm-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:22 http://172.17.0.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:23 http://172.17.0.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:24 http://172.17.0.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:25 http://172.17.0.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:26 http://172.17.0.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:27 http://172.17.0.1/private bookworm-staging/main armhf automake all 1:1.16.5-1 [823 kB]
Get:28 http://172.17.0.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:29 http://172.17.0.1/private bookworm-staging/main armhf libdebhelper-perl all 13.5.2 [192 kB]
Get:30 http://172.17.0.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:31 http://172.17.0.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:32 http://172.17.0.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:33 http://172.17.0.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:34 http://172.17.0.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.12.0-2 [26.3 kB]
Get:35 http://172.17.0.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.12.0-2 [15.5 kB]
Get:36 http://172.17.0.1/private bookworm-staging/main armhf libelf1 armhf 0.185-2 [168 kB]
Get:37 http://172.17.0.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:38 http://172.17.0.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:39 http://172.17.0.1/private bookworm-staging/main armhf libxml2 armhf 2.9.12+dfsg-5 [584 kB]
Get:40 http://172.17.0.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:41 http://172.17.0.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:42 http://172.17.0.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:43 http://172.17.0.1/private bookworm-staging/main armhf debhelper all 13.5.2 [1056 kB]
Get:44 http://172.17.0.1/private bookworm-staging/main armhf python3-lib2to3 all 3.9.7-1 [79.4 kB]
Get:45 http://172.17.0.1/private bookworm-staging/main armhf python3-distutils all 3.9.7-1 [146 kB]
Get:46 http://172.17.0.1/private bookworm-staging/main armhf dh-python all 5.20211016.1 [103 kB]
Get:47 http://172.17.0.1/private bookworm-staging/main armhf python3-pkg-resources all 58.2.0-1 [192 kB]
Get:48 http://172.17.0.1/private bookworm-staging/main armhf python3-setuptools all 58.2.0-1 [396 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 23.2 MB in 2s (12.0 MB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12484 files and directories currently installed.)
Preparing to unpack .../0-bsdextrautils_2.37.2-4_armhf.deb ...
Unpacking bsdextrautils (2.37.2-4) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../1-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../2-groff-base_1.22.4-7_armhf.deb ...
Unpacking groff-base (1.22.4-7) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../3-libpipeline1_1.5.3-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../4-man-db_2.9.4-2_armhf.deb ...
Unpacking man-db (2.9.4-2) ...
Selecting previously unselected package libpython3.9-minimal:armhf.
Preparing to unpack .../5-libpython3.9-minimal_3.9.7-4+rpi1_armhf.deb ...
Unpacking libpython3.9-minimal:armhf (3.9.7-4+rpi1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../6-libexpat1_2.4.1-2_armhf.deb ...
Unpacking libexpat1:armhf (2.4.1-2) ...
Selecting previously unselected package python3.9-minimal.
Preparing to unpack .../7-python3.9-minimal_3.9.7-4+rpi1_armhf.deb ...
Unpacking python3.9-minimal (3.9.7-4+rpi1) ...
Setting up libpython3.9-minimal:armhf (3.9.7-4+rpi1) ...
Setting up libexpat1:armhf (2.4.1-2) ...
Setting up python3.9-minimal (3.9.7-4+rpi1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13351 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.9.2-3_armhf.deb ...
Unpacking python3-minimal (3.9.2-3) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_4.0.0_all.deb ...
Unpacking media-types (4.0.0) ...
Selecting previously unselected package libffi8:armhf.
Preparing to unpack .../2-libffi8_3.4.2-3_armhf.deb ...
Unpacking libffi8:armhf (3.4.2-3) ...
Selecting previously unselected package libmpdec3:armhf.
Preparing to unpack .../3-libmpdec3_2.5.1-2+rpi1_armhf.deb ...
Unpacking libmpdec3:armhf (2.5.1-2+rpi1) ...
Selecting previously unselected package libpython3.9-stdlib:armhf.
Preparing to unpack .../4-libpython3.9-stdlib_3.9.7-4+rpi1_armhf.deb ...
Unpacking libpython3.9-stdlib:armhf (3.9.7-4+rpi1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../5-python3.9_3.9.7-4+rpi1_armhf.deb ...
Unpacking python3.9 (3.9.7-4+rpi1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../6-libpython3-stdlib_3.9.2-3_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.9.2-3) ...
Setting up python3-minimal (3.9.2-3) ...
Selecting previously unselected package python3.
(Reading database ... 13754 files and directories currently installed.)
Preparing to unpack .../00-python3_3.9.2-3_armhf.deb ...
Unpacking python3 (3.9.2-3) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ...
Unpacking sensible-utils (0.0.17) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../02-libmagic-mgc_1%3a5.39-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.39-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../03-libmagic1_1%3a5.39-3_armhf.deb ...
Unpacking libmagic1:armhf (1:5.39-3) ...
Selecting previously unselected package file.
Preparing to unpack .../04-file_1%3a5.39-3_armhf.deb ...
Unpacking file (1:5.39-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../05-gettext-base_0.21-4_armhf.deb ...
Unpacking gettext-base (0.21-4) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../06-libsigsegv2_2.13-1_armhf.deb ...
Unpacking libsigsegv2:armhf (2.13-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../07-m4_1.4.18-5_armhf.deb ...
Unpacking m4 (1.4.18-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../08-autoconf_2.71-2_all.deb ...
Unpacking autoconf (2.71-2) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../09-autotools-dev_20180224.1+nmu1_all.deb ...
Unpacking autotools-dev (20180224.1+nmu1) ...
Selecting previously unselected package automake.
Preparing to unpack .../10-automake_1%3a1.16.5-1_all.deb ...
Unpacking automake (1:1.16.5-1) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../11-autopoint_0.21-4_all.deb ...
Unpacking autopoint (0.21-4) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../12-libdebhelper-perl_13.5.2_all.deb ...
Unpacking libdebhelper-perl (13.5.2) ...
Selecting previously unselected package libtool.
Preparing to unpack .../13-libtool_2.4.6-15_all.deb ...
Unpacking libtool (2.4.6-15) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../14-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../15-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../16-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.12.0-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.12.0-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../18-dh-strip-nondeterminism_1.12.0-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.12.0-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../19-libelf1_0.185-2_armhf.deb ...
Unpacking libelf1:armhf (0.185-2) ...
Selecting previously unselected package dwz.
Preparing to unpack .../20-dwz_0.14-1_armhf.deb ...
Unpacking dwz (0.14-1) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../21-libicu67_67.1-7_armhf.deb ...
Unpacking libicu67:armhf (67.1-7) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../22-libxml2_2.9.12+dfsg-5_armhf.deb ...
Unpacking libxml2:armhf (2.9.12+dfsg-5) ...
Selecting previously unselected package gettext.
Preparing to unpack .../23-gettext_0.21-4_armhf.deb ...
Unpacking gettext (0.21-4) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../25-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../26-debhelper_13.5.2_all.deb ...
Unpacking debhelper (13.5.2) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../27-python3-lib2to3_3.9.7-1_all.deb ...
Unpacking python3-lib2to3 (3.9.7-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../28-python3-distutils_3.9.7-1_all.deb ...
Unpacking python3-distutils (3.9.7-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../29-dh-python_5.20211016.1_all.deb ...
Unpacking dh-python (5.20211016.1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../30-python3-pkg-resources_58.2.0-1_all.deb ...
Unpacking python3-pkg-resources (58.2.0-1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../31-python3-setuptools_58.2.0-1_all.deb ...
Unpacking python3-setuptools (58.2.0-1) ...
Selecting previously unselected package sbuild-build-depends-nanolyse-dummy.
Preparing to unpack .../32-sbuild-build-depends-nanolyse-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-nanolyse-dummy (0.invalid.0) ...
Setting up media-types (4.0.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.37.2-4) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.5.2) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.21-4) ...
Setting up file (1:5.39-3) ...
Setting up autotools-dev (20180224.1+nmu1) ...
Setting up libsigsegv2:armhf (2.13-1) ...
Setting up autopoint (0.21-4) ...
Setting up libffi8:armhf (3.4.2-3) ...
Setting up sensible-utils (0.0.17) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.185-2) ...
Setting up libxml2:armhf (2.9.12+dfsg-5) ...
Setting up libpython3.9-stdlib:armhf (3.9.7-4+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.2-3) ...
Setting up libfile-stripnondeterminism-perl (1.12.0-2) ...
Setting up gettext (0.21-4) ...
Setting up libtool (2.4.6-15) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.71-2) ...
Setting up dh-strip-nondeterminism (1.12.0-2) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-7) ...
Setting up python3.9 (3.9.7-4+rpi1) ...
Setting up automake (1:1.16.5-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.9.2-3) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up python3-lib2to3 (3.9.7-1) ...
Setting up python3-pkg-resources (58.2.0-1) ...
Setting up python3-distutils (3.9.7-1) ...
Setting up dh-python (5.20211016.1) ...
Setting up python3-setuptools (58.2.0-1) ...
Setting up debhelper (13.5.2) ...
Setting up sbuild-build-depends-nanolyse-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.32-4+rpi1) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.37-5+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.3.0-9+rpi1 gcc-10_10.3.0-9+rpi1 libc6-dev_2.32-4+rpi1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 linux-libc-dev_5.10.46-4+rpi1
Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12+rpi1 base-passwd_3.5.51 bash_5.1-3 binutils_2.37-5+rpi1 binutils-arm-linux-gnueabihf_2.37-5+rpi1 binutils-common_2.37-5+rpi1 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-1 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.3.0-9+rpi1 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.5.2 debianutils_4.11.2 dh-autoreconf_20 dh-python_5.20211016.1 dh-strip-nondeterminism_1.12.0-2 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.3.0-9+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.3.0-9+rpi1 gcc-10-base_10.3.0-9+rpi1 gcc-11-base_11.2.0-4+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.3.9 libarchive-zip-perl_1.68-1 libasan6_11.2.0-4+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-4+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.5-1 libaudit1_1:3.0.5-1 libbinutils_2.37-5+rpi1 libblkid1_2.37.2-1 libbz2-1.0_1.0.8-4 libc-bin_2.32-4+rpi1 libc-dev-bin_2.32-4+rpi1 libc6_2.32-4+rpi1 libc6-dev_2.32-4+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_11.2.0-4+rpi1 libcom-err2_1.46.4-1 libcrypt-dev_1:4.4.25-2 libcrypt1_1:4.4.25-2 libctf-nobfd0_2.37-5+rpi1 libctf0_2.37-5+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.5.2 libdpkg-perl_1.20.9+rpi1 libelf1_0.185-2 libexpat1_2.4.1-2 libext2fs2_1.46.4-1 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libffi8_3.4.2-3 libfile-stripnondeterminism-perl_1.12.0-2 libgcc-10-dev_10.3.0-9+rpi1 libgcc-s1_11.2.0-4+rpi1 libgcrypt20_1.9.4-3 libgdbm-compat4_1.21-1 libgdbm6_1.21-1 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-4+rpi1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.23-1 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libksba8_1.6.0-2 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.37.2-1 libmpc3_1.2.0-1 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-4 libnettle8_3.7.3-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-2 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-5 libpipeline1_1.5.3-1 libpython3-stdlib_3.9.2-3 libpython3.9-minimal_3.9.7-4+rpi1 libpython3.9-stdlib_3.9.7-4+rpi1 libreadline8_8.1-2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.37.2-1 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssl1.1_1.1.1l-1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.9-1+rpi1 libtasn1-6_4.17.0-2 libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20201114-4 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libubsan1_11.2.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_247.9-1+rpi1 libunistring2_0.9.10-6 libuuid1_2.37.2-1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.46-4+rpi1 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mount_2.37.2-1 ncurses-base_6.2+20201114-4 ncurses-bin_6.2+20201114-4 netbase_6.3 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-5 perl-base_5.32.1-5 perl-modules-5.32_5.32.1-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 python3_3.9.2-3 python3-distutils_3.9.7-1 python3-lib2to3_3.9.7-1 python3-minimal_3.9.2-3 python3-pkg-resources_58.2.0-1 python3-setuptools_58.2.0-1 python3.9_3.9.7-4+rpi1 python3.9-minimal_3.9.7-4+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-nanolyse-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.37.2-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.5Xq8vECT/trustedkeys.kbx': General error
gpgv: Signature made Fri Oct 15 06:10:32 2021 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./nanolyse_1.2.0-2.dsc
dpkg-source: info: extracting nanolyse in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking nanolyse_1.2.0.orig.tar.gz
dpkg-source: info: unpacking nanolyse_1.2.0-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying path_to_reference.patch

Check disc space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 1.2.0-2+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-2cd107c1-7965-439a-b372-e159e390bd45
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package nanolyse
dpkg-buildpackage: info: source version 1.2.0-2+b1
dpkg-buildpackage: info: source distribution bookworm-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:232: python3.9 setup.py clean 
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'build-lib' will not be supported in future versions. Please use the underscore name 'build_lib' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-layout' will not be supported in future versions. Please use the underscore name 'install_layout' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-scripts' will not be supported in future versions. Please use the underscore name 'install_scripts' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-lib' will not be supported in future versions. Please use the underscore name 'install_lib' instead
  warnings.warn(
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:232: python3.9 setup.py config 
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'build-lib' will not be supported in future versions. Please use the underscore name 'build_lib' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-layout' will not be supported in future versions. Please use the underscore name 'install_layout' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-scripts' will not be supported in future versions. Please use the underscore name 'install_scripts' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-lib' will not be supported in future versions. Please use the underscore name 'install_lib' instead
  warnings.warn(
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:232: /usr/bin/python3 setup.py build 
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'build-lib' will not be supported in future versions. Please use the underscore name 'build_lib' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-layout' will not be supported in future versions. Please use the underscore name 'install_layout' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-scripts' will not be supported in future versions. Please use the underscore name 'install_scripts' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-lib' will not be supported in future versions. Please use the underscore name 'install_lib' instead
  warnings.warn(
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/NanoLyse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
package init file 'reference/__init__.py' not found (or not a regular file)
running egg_info
creating NanoLyse.egg-info
writing NanoLyse.egg-info/PKG-INFO
writing dependency_links to NanoLyse.egg-info/dependency_links.txt
writing entry points to NanoLyse.egg-info/entry_points.txt
writing requirements to NanoLyse.egg-info/requires.txt
writing top-level names to NanoLyse.egg-info/top_level.txt
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference
copying reference/lambda.fasta.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build; python3.9 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

OK
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install --destdir=debian/nanolyse/ -a -O--buildsystem=pybuild
I: pybuild base:232: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/nanolyse 
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'build-lib' will not be supported in future versions. Please use the underscore name 'build_lib' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-layout' will not be supported in future versions. Please use the underscore name 'install_layout' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-scripts' will not be supported in future versions. Please use the underscore name 'install_scripts' instead
  warnings.warn(
/usr/lib/python3/dist-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'install-lib' will not be supported in future versions. Please use the underscore name 'install_lib' instead
  warnings.warn(
running install
running build
running build_py
package init file 'reference/__init__.py' not found (or not a regular file)
running egg_info
writing NanoLyse.egg-info/PKG-INFO
writing dependency_links to NanoLyse.egg-info/dependency_links.txt
writing entry points to NanoLyse.egg-info/entry_points.txt
writing requirements to NanoLyse.egg-info/requires.txt
writing top-level names to NanoLyse.egg-info/top_level.txt
reading manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
running install_lib
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__init__.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/version.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/NanoLyse.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__pycache__/version.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/reference
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference/lambda.fasta.gz -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/reference
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/version.py to version.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/NanoLyse.py to NanoLyse.cpython-39.pyc
running install_egg_info
Copying NanoLyse.egg-info to /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/NanoLyse-1.2.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing NanoLyse script to /<<PKGBUILDDIR>>/debian/nanolyse/usr/bin
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
rm -r debian/nanolyse/usr/lib/python3*/dist-packages/reference
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_installexamples -a -O--buildsystem=pybuild
   dh_installman -a -O--buildsystem=pybuild
   dh_python3 -a -O--buildsystem=pybuild
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_lintian -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'nanolyse' in '../nanolyse_1.2.0-2+b1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../nanolyse_1.2.0-2+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-10-25T23:22:37Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


nanolyse_1.2.0-2+b1_armhf.changes:
----------------------------------

Format: 1.8
Date: Fri, 15 Oct 2021 08:09:02 +0200
Source: nanolyse (1.2.0-2)
Binary: nanolyse
Binary-Only: yes
Architecture: armhf
Version: 1.2.0-2+b1
Distribution: bookworm-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
 nanolyse   - remove lambda phage reads from a fastq file
Changes:
 nanolyse (1.2.0-2+b1) bookworm-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 972d266ca3caf676d4768739775a76aea30225aa 5517 nanolyse_1.2.0-2+b1_armhf.buildinfo
 629a03d2adcf8819cf50475b9cf07cca89f90c25 25496 nanolyse_1.2.0-2+b1_armhf.deb
Checksums-Sha256:
 999e01c703ea01f1a57a4b474419cc254f352530654325205022507fc89abb28 5517 nanolyse_1.2.0-2+b1_armhf.buildinfo
 1cae898dfd6c058be19e6f9ef2be88b6a22ff5d722a544e321018fa112e07a04 25496 nanolyse_1.2.0-2+b1_armhf.deb
Files:
 3c23b28a173911a6f55d1bcf3646b409 5517 science optional nanolyse_1.2.0-2+b1_armhf.buildinfo
 f5e52e38b22705246109dff269e964ef 25496 science optional nanolyse_1.2.0-2+b1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


nanolyse_1.2.0-2+b1_armhf.deb
-----------------------------

 new Debian package, version 2.0.
 size 25496 bytes: control archive=1724 bytes.
     788 bytes,    17 lines      control              
    1637 bytes,    20 lines      md5sums              
     253 bytes,    12 lines   *  postinst             #!/bin/sh
     402 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: nanolyse
 Source: nanolyse (1.2.0-2)
 Version: 1.2.0-2+b1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 67
 Depends: python3-biopython, python3-mappy, python3:any
 Section: science
 Priority: optional
 Homepage: https://github.com/wdecoster/nanolyse
 Description: remove lambda phage reads from a fastq file
  NanoLyse is a tool for rapid removal of contaminant DNA, using the
  Minimap2 aligner through the mappy Python binding. A typical application
  would be the removal of the lambda phage control DNA fragment supplied
  by ONT, for which the reference sequence is included in the package.
  However, this approach may lead to unwanted loss of reads from regions
  highly homologous to the lambda phage genome.

drwxr-xr-x root/root         0 2021-10-15 06:09 ./
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/bin/
-rwxr-xr-x root/root       963 2021-10-15 06:09 ./usr/bin/NanoLyse
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/lib/python3/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/
-rw-r--r-- root/root      3116 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/dependency_links.txt
-rw-r--r-- root/root        53 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/requires.txt
-rw-r--r-- root/root        19 2021-10-15 06:09 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/lib/python3/dist-packages/nanolyse/
-rw-r--r-- root/root      5889 2021-10-15 06:09 ./usr/lib/python3/dist-packages/nanolyse/NanoLyse.py
-rw-r--r-- root/root        33 2020-09-11 11:46 ./usr/lib/python3/dist-packages/nanolyse/__init__.py
-rw-r--r-- root/root        22 2020-09-11 11:46 ./usr/lib/python3/dist-packages/nanolyse/version.py
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/doc/nanolyse/
-rw-r--r-- root/root       278 2021-10-15 06:09 ./usr/share/doc/nanolyse/README.test
-rw-r--r-- root/root       222 2021-10-15 06:09 ./usr/share/doc/nanolyse/changelog.Debian.armhf.gz
-rw-r--r-- root/root       279 2021-10-15 06:09 ./usr/share/doc/nanolyse/changelog.Debian.gz
-rw-r--r-- root/root      1158 2021-10-15 06:09 ./usr/share/doc/nanolyse/copyright
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/doc/nanolyse/examples/
-rw-r--r-- root/root       258 2021-10-15 06:09 ./usr/share/doc/nanolyse/examples/README
-rw-r--r-- root/root      1463 2021-10-15 06:09 ./usr/share/doc/nanolyse/examples/paired_reads.fastq
-rw-r--r-- root/root       304 2021-10-15 06:09 ./usr/share/doc/nanolyse/run-unit-test
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/lintian/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       118 2021-10-15 06:09 ./usr/share/lintian/overrides/nanolyse
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/man/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/man/man1/
-rw-r--r-- root/root       617 2021-10-15 06:09 ./usr/share/man/man1/NanoLyse.1.gz
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/nanolyse/
drwxr-xr-x root/root         0 2021-10-15 06:09 ./usr/share/nanolyse/reference/
-rw-r--r-- root/root      3569 2020-09-11 11:46 ./usr/share/nanolyse/reference/DNA_CS.fasta
-rw-r--r-- root/root     15316 2021-10-15 06:09 ./usr/share/nanolyse/reference/lambda.fasta.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 456
Build-Time: 55
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 453
Job: nanolyse_1.2.0-2
Machine Architecture: armhf
Package: nanolyse
Package-Time: 554
Source-Version: 1.2.0-2
Space: 456
Status: successful
Version: 1.2.0-2+b1
--------------------------------------------------------------------------------
Finished at 2021-10-25T23:22:37Z
Build needed 00:09:14, 456k disc space