Raspbian Package Auto-Building

Build log for nanolyse (1.2.0-1+b7) on armhf

nanolyse1.2.0-1+b7armhf → 2021-07-12 11:11:41

sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019

+==============================================================================+
| nanolyse 1.2.0-1+b7 (armhf)                  Mon, 12 Jul 2021 11:06:30 +0000 |
+==============================================================================+

Package: nanolyse
Version: 1.2.0-1+b7
Source Version: 1.2.0-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-5263b3f9-75dc-4d63-8480-5da400d049f7' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/nanolyse-QIZYy9/resolver-J30ekj' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.2 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.2 MB]
Fetched 25.5 MB in 11s (2347 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'nanolyse' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/nanolyse.git
Please use:
git clone https://salsa.debian.org/med-team/nanolyse.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 40.7 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main nanolyse 1.2.0-1 (dsc) [1999 B]
Get:2 http://172.17.0.1/private bullseye-staging/main nanolyse 1.2.0-1 (tar) [34.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main nanolyse 1.2.0-1 (diff) [4628 B]
Fetched 40.7 kB in 0s (214 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/nanolyse-QIZYy9/nanolyse-1.2.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/nanolyse-QIZYy9' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [391 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [472 B]
Fetched 1820 B in 0s (48.0 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl
  libicu67 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
  libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources
  python3-setuptools python3.9 python3.9-minimal sensible-utils
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
  libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc
  python3.9-venv python3.9-doc binfmt-support
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl ca-certificates libltdl-dev
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl
  libicu67 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
  libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources
  python3-setuptools python3.9 python3.9-minimal
  sbuild-build-depends-main-dummy sensible-utils
0 upgraded, 47 newly installed, 0 to remove and 22 not upgraded.
Need to get 23.2 MB of archives.
After this operation, 87.3 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [892 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf bsdextrautils armhf 2.36.1-7 [137 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-6 [793 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.2-1+rpi1 [791 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-2 [73.4 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.2-1+rpi1 [1625 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf media-types all 4.0.0 [30.3 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libmpdec3 armhf 2.5.1-1+rpi1 [73.4 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.2-1+rpi1 [1616 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.2-1+rpi1 [466 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.2-3 [37.9 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.14 [14.8 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-14 [313 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.3-2 [814 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3.4 [189 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.183-1 [161 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20210201-1 [164 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [580 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3.4 [1049 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.9.2-1 [143 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102+nmu1 [99.4 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 52.0.0-4 [190 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 52.0.0-4 [366 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up media-types (4.0.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.36.1-7) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
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Setting up libmagic1:armhf (1:5.39-3) ...
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Setting up libmpdec3:armhf (2.5.1-1+rpi1) ...
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Setting up libxml2:armhf (2.9.10+dfsg-6.7) ...
Setting up libpython3.9-stdlib:armhf (3.9.2-1+rpi1) ...
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Setting up libfile-stripnondeterminism-perl (1.11.0-1) ...
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Setting up autoconf (2.69-14) ...
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Setting up python3.9 (3.9.2-1+rpi1) ...
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.35.2-2+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.2.1-6+rpi1 gcc-10_10.2.1-6+rpi1 libc6-dev_2.31-11+rpi1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 linux-libc-dev_5.10.28-1+rpi1
Package versions: adduser_3.118 apt_2.2.3 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11+rpi1 base-passwd_3.5.49 bash_5.1-2 binutils_2.35.2-2+rpi1 binutils-arm-linux-gnueabihf_2.35.2-2+rpi1 binutils-common_2.35.2-2+rpi1 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.2.1-6+rpi1 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.75 debhelper_13.3.4 debianutils_4.11.2 dh-autoreconf_20 dh-python_4.20201102+nmu1 dh-strip-nondeterminism_1.11.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.13+20210201-1 e2fsprogs_1.46.2-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.2.1-6+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.2.1-6+rpi1 gcc-10-base_10.2.1-6+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.3.0-22+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg6.0_2.2.3 libarchive-zip-perl_1.68-1 libasan6_10.2.1-6+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-6+rpi1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2+rpi1 libblkid1_2.36.1-7 libbz2-1.0_1.0.8-4 libc-bin_2.31-11+rpi1 libc-dev-bin_2.31-11+rpi1 libc6_2.31-11+rpi1 libc6-dev_2.31-11+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6+rpi1 libcom-err2_1.46.2-1 libcrypt-dev_1:4.4.18-2 libcrypt1_1:4.4.18-2 libctf-nobfd0_2.35.2-2+rpi1 libctf0_2.35.2-2+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.257 libdebhelper-perl_13.3.4 libdpkg-perl_1.20.9+rpi1 libelf1_0.183-1 libexpat1_2.2.10-2 libext2fs2_1.46.2-1 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.11.0-1 libgcc-10-dev_10.2.1-6+rpi1 libgcc-s1_10.2.1-6+rpi1 libgcrypt20_1.8.7-3 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-3 libgomp1_10.2.1-6+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-5 libhogweed6_3.7.2-3 libicu67_67.1-7 libidn2-0_2.3.0-5 libisl23_0.23-1 libk5crypto3_1.18.3-5 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-5 libkrb5support0_1.18.3-5 libksba8_1.5.0-3 libldap-2.4-2_2.4.57+dfsg-2 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-1+rpi1 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-7 libmpc3_1.2.0-1 libmpdec3_2.5.1-1+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-2 libnettle8_3.7.2-3 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-7 libpam-modules-bin_1.4.0-7 libpam-runtime_1.4.0-7 libpam0g_1.4.0-7 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libpython3-stdlib_3.9.2-3 libpython3.9-minimal_3.9.2-1+rpi1 libpython3.9-stdlib_3.9.2-1+rpi1 libreadline8_8.1-1 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libsqlite3-0_3.34.1-3 libss2_1.46.2-1 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.3-5+rpi1 libtasn1-6_4.16.0-2 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libubsan1_10.2.1-6+rpi1 libuchardet0_0.0.7-1 libudev1_247.3-5+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-7 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.28-1+rpi1 login_1:4.8.1-1 logsave_1.46.2-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mount_2.36.1-7 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4 perl-base_5.32.1-4 perl-modules-5.32_5.32.1-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 python3_3.9.2-3 python3-distutils_3.9.2-1 python3-lib2to3_3.9.2-1 python3-minimal_3.9.2-3 python3-pkg-resources_52.0.0-4 python3-setuptools_52.0.0-4 python3.9_3.9.2-1+rpi1 python3.9-minimal_3.9.2-1+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.36.1-7 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: nanolyse
Binary: nanolyse
Architecture: any
Version: 1.2.0-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://github.com/wdecoster/nanolyse
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/nanolyse
Vcs-Git: https://salsa.debian.org/med-team/nanolyse.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools
Package-List:
 nanolyse deb science optional arch=any
Checksums-Sha1:
 e1395d91ea7796c9a6fc88cd944bd234a92da761 34030 nanolyse_1.2.0.orig.tar.gz
 6e2e15b2f494695d193333b6eb483a4f8fdb358f 4628 nanolyse_1.2.0-1.debian.tar.xz
Checksums-Sha256:
 99a54266c9a1a31ea196d6a35195e7f0a48ee3c3103faecdfd00c945a41d582d 34030 nanolyse_1.2.0.orig.tar.gz
 d69509befb1374b5c3297484a2779d9125e860363e48cf99814dfb911606e1f3 4628 nanolyse_1.2.0-1.debian.tar.xz
Files:
 c3323e3284203496566fe19a6b4822f1 34030 nanolyse_1.2.0.orig.tar.gz
 c162eb394d6d0ae05b8e1d888b99f42c 4628 nanolyse_1.2.0-1.debian.tar.xz

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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.qCGJwITJ/trustedkeys.kbx': General error
gpgv: Signature made Fri Oct 23 13:09:02 2020 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./nanolyse_1.2.0-1.dsc
dpkg-source: info: extracting nanolyse in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking nanolyse_1.2.0.orig.tar.gz
dpkg-source: info: unpacking nanolyse_1.2.0-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying path_to_reference.patch

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 1.2.0-1+b7

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=3022a9708189491d95cf94702fa03404
JOURNAL_STREAM=8:14335
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-5263b3f9-75dc-4d63-8480-5da400d049f7
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c50377
XDG_SESSION_TYPE=unspecified

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package nanolyse
dpkg-buildpackage: info: source version 1.2.0-1+b7
dpkg-buildpackage: info: source distribution bullseye-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:232: python3.9 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:232: python3.9 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:232: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
copying nanolyse/NanoLyse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse
package init file 'reference/__init__.py' not found (or not a regular file)
running egg_info
creating NanoLyse.egg-info
writing NanoLyse.egg-info/PKG-INFO
writing dependency_links to NanoLyse.egg-info/dependency_links.txt
writing entry points to NanoLyse.egg-info/entry_points.txt
writing requirements to NanoLyse.egg-info/requires.txt
writing top-level names to NanoLyse.egg-info/top_level.txt
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference
copying reference/lambda.fasta.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build; python3.9 -m unittest discover -v 

----------------------------------------------------------------------
Ran 0 tests in 0.000s

OK
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:232: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/nanolyse 
running install
running build
running build_py
package init file 'reference/__init__.py' not found (or not a regular file)
running egg_info
writing NanoLyse.egg-info/PKG-INFO
writing dependency_links to NanoLyse.egg-info/dependency_links.txt
writing entry points to NanoLyse.egg-info/entry_points.txt
writing requirements to NanoLyse.egg-info/requires.txt
writing top-level names to NanoLyse.egg-info/top_level.txt
reading manifest file 'NanoLyse.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'NanoLyse.egg-info/SOURCES.txt'
running install_lib
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__init__.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/version.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/NanoLyse.py -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/nanolyse/__pycache__/version.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__pycache__
creating /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/reference
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/reference/lambda.fasta.gz -> /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/reference
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/version.py to version.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/nanolyse/NanoLyse.py to NanoLyse.cpython-39.pyc
running install_egg_info
Copying NanoLyse.egg-info to /<<PKGBUILDDIR>>/debian/nanolyse/usr/lib/python3.9/dist-packages/NanoLyse-1.2.0.egg-info
Skipping SOURCES.txt
running install_scripts
Installing NanoLyse script to /<<PKGBUILDDIR>>/debian/nanolyse/usr/bin
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
rm -r debian/nanolyse/usr/lib/python3*/dist-packages/reference
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_installexamples -a -O--buildsystem=pybuild
   dh_installman -a -O--buildsystem=pybuild
   dh_python3 -a -O--buildsystem=pybuild
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_lintian -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -a -O--buildsystem=pybuild
   dh_strip -a -a -O--buildsystem=pybuild
   dh_makeshlibs -a -a -O--buildsystem=pybuild
   dh_shlibdeps -a -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'nanolyse' in '../nanolyse_1.2.0-1+b7_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../nanolyse_1.2.0-1+b7_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-07-12T11:11:37Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


nanolyse_1.2.0-1+b7_armhf.changes:
----------------------------------

Format: 1.8
Date: Mon, 12 Jul 2021 11:11:19 +0000
Source: nanolyse (1.2.0-1)
Binary: nanolyse
Binary-Only: yes
Architecture: armhf
Version: 1.2.0-1+b7
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Raspbian pi4 based autobuilder <root@raspbian.org>
Description:
 nanolyse   - remove lambda phage reads from a fastq file
Changes:
 nanolyse (1.2.0-1+b7) bullseye-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 dc23f9d3bc4d29bb8e56d01d6dc1fade74dcaf77 5505 nanolyse_1.2.0-1+b7_armhf.buildinfo
 862853a95df95bcafda71553ae84e65a55179aa5 25408 nanolyse_1.2.0-1+b7_armhf.deb
Checksums-Sha256:
 80bd9a19f7f1fe20eb0619eef4698d646a0b42a3af8991464cf1a63f0f1181ee 5505 nanolyse_1.2.0-1+b7_armhf.buildinfo
 8c41fea27543c650c254013103bba09d0921d611a0e6af3ebd834f8d57cbe48a 25408 nanolyse_1.2.0-1+b7_armhf.deb
Files:
 af628f9755ac39fd52b0efc127fb85fc 5505 science optional nanolyse_1.2.0-1+b7_armhf.buildinfo
 82536f4ae93676f93be25a2123e4907e 25408 science optional nanolyse_1.2.0-1+b7_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: nanolyse (1.2.0-1)
Binary: nanolyse
Architecture: armhf
Version: 1.2.0-1+b7
Binary-Only-Changes:
 nanolyse (1.2.0-1+b7) bullseye-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
 .
  -- Raspbian pi4 based autobuilder <root@raspbian.org>  Mon, 12 Jul 2021 11:11:19 +0000
Checksums-Md5:
 82536f4ae93676f93be25a2123e4907e 25408 nanolyse_1.2.0-1+b7_armhf.deb
Checksums-Sha1:
 862853a95df95bcafda71553ae84e65a55179aa5 25408 nanolyse_1.2.0-1+b7_armhf.deb
Checksums-Sha256:
 8c41fea27543c650c254013103bba09d0921d611a0e6af3ebd834f8d57cbe48a 25408 nanolyse_1.2.0-1+b7_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 12 Jul 2021 11:11:36 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.69-14),
 automake (= 1:1.16.3-2),
 autopoint (= 0.21-4),
 autotools-dev (= 20180224.1+nmu1),
 base-files (= 11+rpi1),
 base-passwd (= 3.5.49),
 bash (= 5.1-2),
 binutils (= 2.35.2-2+rpi1),
 binutils-arm-linux-gnueabihf (= 2.35.2-2+rpi1),
 binutils-common (= 2.35.2-2+rpi1),
 bsdextrautils (= 2.36.1-7),
 bsdutils (= 1:2.36.1-7),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-4),
 coreutils (= 8.32-4),
 cpp (= 4:10.2.1-1+rpi1),
 cpp-10 (= 10.2.1-6+rpi1),
 dash (= 0.5.11+git20200708+dd9ef66-5),
 debconf (= 1.5.75),
 debhelper (= 13.3.4),
 debianutils (= 4.11.2),
 dh-autoreconf (= 20),
 dh-python (= 4.20201102+nmu1),
 dh-strip-nondeterminism (= 1.11.0-1),
 diffutils (= 1:3.7-5),
 dpkg (= 1.20.9+rpi1),
 dpkg-dev (= 1.20.9+rpi1),
 dwz (= 0.13+20210201-1),
 file (= 1:5.39-3),
 findutils (= 4.8.0-1),
 g++ (= 4:10.2.1-1+rpi1),
 g++-10 (= 10.2.1-6+rpi1),
 gcc (= 4:10.2.1-1+rpi1),
 gcc-10 (= 10.2.1-6+rpi1),
 gcc-10-base (= 10.2.1-6+rpi1),
 gettext (= 0.21-4),
 gettext-base (= 0.21-4),
 grep (= 3.6-1),
 groff-base (= 1.22.4-6),
 gzip (= 1.10-4),
 hostname (= 3.23),
 init-system-helpers (= 1.60),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.2.53-10),
 libarchive-zip-perl (= 1.68-1),
 libasan6 (= 10.2.1-6+rpi1),
 libatomic1 (= 10.2.1-6+rpi1),
 libattr1 (= 1:2.4.48-6),
 libaudit-common (= 1:3.0-2),
 libaudit1 (= 1:3.0-2),
 libbinutils (= 2.35.2-2+rpi1),
 libblkid1 (= 2.36.1-7),
 libbz2-1.0 (= 1.0.8-4),
 libc-bin (= 2.31-11+rpi1),
 libc-dev-bin (= 2.31-11+rpi1),
 libc6 (= 2.31-11+rpi1),
 libc6-dev (= 2.31-11+rpi1),
 libcap-ng0 (= 0.7.9-2.2+b1),
 libcc1-0 (= 10.2.1-6+rpi1),
 libcom-err2 (= 1.46.2-1),
 libcrypt-dev (= 1:4.4.18-2),
 libcrypt1 (= 1:4.4.18-2),
 libctf-nobfd0 (= 2.35.2-2+rpi1),
 libctf0 (= 2.35.2-2+rpi1),
 libdb5.3 (= 5.3.28+dfsg1-0.8),
 libdebconfclient0 (= 0.257),
 libdebhelper-perl (= 13.3.4),
 libdpkg-perl (= 1.20.9+rpi1),
 libelf1 (= 0.183-1),
 libexpat1 (= 2.2.10-2),
 libffi7 (= 3.3-6),
 libfile-stripnondeterminism-perl (= 1.11.0-1),
 libgcc-10-dev (= 10.2.1-6+rpi1),
 libgcc-s1 (= 10.2.1-6+rpi1),
 libgcrypt20 (= 1.8.7-3),
 libgdbm-compat4 (= 1.19-2),
 libgdbm6 (= 1.19-2),
 libgmp10 (= 2:6.2.1+dfsg-1),
 libgomp1 (= 10.2.1-6+rpi1),
 libgpg-error0 (= 1.38-2),
 libgssapi-krb5-2 (= 1.18.3-5),
 libicu67 (= 67.1-7),
 libisl23 (= 0.23-1),
 libk5crypto3 (= 1.18.3-5),
 libkeyutils1 (= 1.6.1-2),
 libkrb5-3 (= 1.18.3-5),
 libkrb5support0 (= 1.18.3-5),
 liblz4-1 (= 1.9.3-1+rpi1),
 liblzma5 (= 5.2.5-2),
 libmagic-mgc (= 1:5.39-3),
 libmagic1 (= 1:5.39-3),
 libmount1 (= 2.36.1-7),
 libmpc3 (= 1.2.0-1),
 libmpdec3 (= 2.5.1-1+rpi1),
 libmpfr6 (= 4.1.0-3),
 libncursesw6 (= 6.2+20201114-2),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libpam-modules (= 1.4.0-7),
 libpam-modules-bin (= 1.4.0-7),
 libpam-runtime (= 1.4.0-7),
 libpam0g (= 1.4.0-7),
 libpcre2-8-0 (= 10.36-2),
 libpcre3 (= 2:8.39-13),
 libperl5.32 (= 5.32.1-4),
 libpipeline1 (= 1.5.3-1),
 libpython3-stdlib (= 3.9.2-3),
 libpython3.9-minimal (= 3.9.2-1+rpi1),
 libpython3.9-stdlib (= 3.9.2-1+rpi1),
 libreadline8 (= 8.1-1),
 libseccomp2 (= 2.5.1-1+rpi1),
 libselinux1 (= 3.1-3),
 libsigsegv2 (= 2.13-1),
 libsmartcols1 (= 2.36.1-7),
 libsqlite3-0 (= 3.34.1-3),
 libssl1.1 (= 1.1.1k-1),
 libstdc++-10-dev (= 10.2.1-6+rpi1),
 libstdc++6 (= 10.2.1-6+rpi1),
 libsub-override-perl (= 0.09-2),
 libsystemd0 (= 247.3-5+rpi1),
 libtinfo6 (= 6.2+20201114-2),
 libtirpc-common (= 1.3.1-1),
 libtirpc-dev (= 1.3.1-1),
 libtirpc3 (= 1.3.1-1),
 libtool (= 2.4.6-15),
 libubsan1 (= 10.2.1-6+rpi1),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 247.3-5+rpi1),
 libunistring2 (= 0.9.10-4),
 libuuid1 (= 2.36.1-7),
 libxml2 (= 2.9.10+dfsg-6.7),
 libzstd1 (= 1.4.8+dfsg-2.1+rpi1),
 linux-libc-dev (= 5.10.28-1+rpi1),
 login (= 1:4.8.1-1),
 lsb-base (= 11.1.0+rpi1),
 m4 (= 1.4.18-5),
 make (= 4.3-4.1),
 man-db (= 2.9.4-2),
 mawk (= 1.3.4.20200120-2),
 media-types (= 4.0.0),
 ncurses-base (= 6.2+20201114-2),
 ncurses-bin (= 6.2+20201114-2),
 patch (= 2.7.6-7),
 perl (= 5.32.1-4),
 perl-base (= 5.32.1-4),
 perl-modules-5.32 (= 5.32.1-4),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.9.2-3),
 python3-distutils (= 3.9.2-1),
 python3-lib2to3 (= 3.9.2-1),
 python3-minimal (= 3.9.2-3),
 python3-pkg-resources (= 52.0.0-4),
 python3-setuptools (= 52.0.0-4),
 python3.9 (= 3.9.2-1+rpi1),
 python3.9-minimal (= 3.9.2-1+rpi1),
 readline-common (= 8.1-1),
 sed (= 4.7-1),
 sensible-utils (= 0.0.14),
 sysvinit-utils (= 2.96-7),
 tar (= 1.34+dfsg-1),
 tzdata (= 2021a-1),
 util-linux (= 2.36.1-7),
 xz-utils (= 5.2.5-2),
 zlib1g (= 1:1.2.11.dfsg-2)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1626088279"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


nanolyse_1.2.0-1+b7_armhf.deb
-----------------------------

 new Debian package, version 2.0.
 size 25408 bytes: control archive=1724 bytes.
     788 bytes,    17 lines      control              
    1637 bytes,    20 lines      md5sums              
     241 bytes,    12 lines   *  postinst             #!/bin/sh
     390 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: nanolyse
 Source: nanolyse (1.2.0-1)
 Version: 1.2.0-1+b7
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 67
 Depends: python3-biopython, python3-mappy, python3:any
 Section: science
 Priority: optional
 Homepage: https://github.com/wdecoster/nanolyse
 Description: remove lambda phage reads from a fastq file
  NanoLyse is a tool for rapid removal of contaminant DNA, using the
  Minimap2 aligner through the mappy Python binding. A typical application
  would be the removal of the lambda phage control DNA fragment supplied
  by ONT, for which the reference sequence is included in the package.
  However, this approach may lead to unwanted loss of reads from regions
  highly homologous to the lambda phage genome.

drwxr-xr-x root/root         0 2021-07-12 11:11 ./
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/bin/
-rwxr-xr-x root/root       963 2021-07-12 11:11 ./usr/bin/NanoLyse
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/lib/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/lib/python3/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/
-rw-r--r-- root/root      3553 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/dependency_links.txt
-rw-r--r-- root/root        53 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/requires.txt
-rw-r--r-- root/root        19 2021-07-12 11:11 ./usr/lib/python3/dist-packages/NanoLyse-1.2.0.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/lib/python3/dist-packages/nanolyse/
-rw-r--r-- root/root      5889 2021-07-12 11:11 ./usr/lib/python3/dist-packages/nanolyse/NanoLyse.py
-rw-r--r-- root/root        33 2020-09-11 11:46 ./usr/lib/python3/dist-packages/nanolyse/__init__.py
-rw-r--r-- root/root        22 2020-09-11 11:46 ./usr/lib/python3/dist-packages/nanolyse/version.py
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/doc/nanolyse/
-rw-r--r-- root/root       278 2020-10-23 13:07 ./usr/share/doc/nanolyse/README.test
-rw-r--r-- root/root       215 2021-07-12 11:11 ./usr/share/doc/nanolyse/changelog.Debian.armhf.gz
-rw-r--r-- root/root       206 2021-07-12 11:11 ./usr/share/doc/nanolyse/changelog.Debian.gz
-rw-r--r-- root/root      1158 2020-10-23 13:07 ./usr/share/doc/nanolyse/copyright
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/doc/nanolyse/examples/
-rw-r--r-- root/root       258 2020-10-23 13:07 ./usr/share/doc/nanolyse/examples/README
-rw-r--r-- root/root      1463 2020-10-23 13:07 ./usr/share/doc/nanolyse/examples/paired_reads.fastq
-rw-r--r-- root/root       304 2020-10-23 13:07 ./usr/share/doc/nanolyse/run-unit-test
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/lintian/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       118 2020-10-23 13:07 ./usr/share/lintian/overrides/nanolyse
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/man/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/man/man1/
-rw-r--r-- root/root       617 2021-07-12 11:11 ./usr/share/man/man1/NanoLyse.1.gz
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/nanolyse/
drwxr-xr-x root/root         0 2021-07-12 11:11 ./usr/share/nanolyse/reference/
-rw-r--r-- root/root      3569 2020-09-11 11:46 ./usr/share/nanolyse/reference/DNA_CS.fasta
-rw-r--r-- root/root     15316 2021-07-12 11:11 ./usr/share/nanolyse/reference/lambda.fasta.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 456
Build-Time: 17
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 263
Job: nanolyse_1.2.0-1
Machine Architecture: armhf
Package: nanolyse
Package-Time: 307
Source-Version: 1.2.0-1
Space: 456
Status: successful
Version: 1.2.0-1+b7
--------------------------------------------------------------------------------
Finished at 2021-07-12T11:11:37Z
Build needed 00:05:07, 456k disk space