minimap →
0.2-4 →
armhf → 2018-07-31 05:04:38
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| minimap 0.2-4 (armhf) Tue, 31 Jul 2018 04:58:07 +0000 |
+==============================================================================+
Package: minimap
Version: 0.2-4
Source Version: 0.2-4
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-c40ba298-08f5-4533-b955-08f771bf9b8c' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.9 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.7 MB]
Fetched 23.6 MB in 28s (835 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'minimap' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/minimap.git
Please use:
git clone https://salsa.debian.org/med-team/minimap.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 112 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main minimap 0.2-4 (dsc) [2102 B]
Get:2 http://172.17.0.1/private buster-staging/main minimap 0.2-4 (tar) [31.2 kB]
Get:3 http://172.17.0.1/private buster-staging/main minimap 0.2-4 (diff) [78.4 kB]
Fetched 112 kB in 0s (325 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/minimap-xanYjA/minimap-0.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/minimap-xanYjA' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-RB4NeP/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-RB4NeP/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-RB4NeP/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2984 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 76 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (64.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15772 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), d-shlibs, zlib1g-dev
Filtered Build-Depends: debhelper (>= 11~), d-shlibs, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-minimap-dummy' in '/<<BUILDDIR>>/resolver-RB4NeP/apt_archive/sbuild-build-depends-minimap-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-minimap-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Sources [505 B]
Get:5 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ Packages [585 B]
Fetched 2423 B in 1s (3421 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install minimap build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1
libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libmagic-mgc libmagic1 libpipeline1
libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db po-debconf zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1
libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libmagic-mgc libmagic1 libpipeline1
libsigsegv2 libtimedate-perl libtool libxml2 m4 man-db po-debconf
sbuild-build-depends-minimap-dummy zlib1g-dev
0 upgraded, 38 newly installed, 0 to remove and 76 not upgraded.
Need to get 20.4 MB/21.0 MB of archives.
After this operation, 69.0 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-RB4NeP/apt_archive ./ sbuild-build-depends-minimap-dummy 0.invalid.0 [868 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.33-3 [234 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.33-3 [106 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.33-3 [64.7 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.82 [18.8 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.042-1 [20.1 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.042-1 [12.1 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.8.4-1+rpi1 [836 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb0 armhf 1.0.3+git161113-5 [12.8 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libicu60 armhf 60.2-6 [7789 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7 [602 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.3.5 [981 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 15772 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.9.1-1_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-1) ...
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Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../03-libpipeline1_1.5.0-1_armhf.deb ...
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Setting up libarchive-zip-perl (1.60-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libelf1:armhf (0.170-0.5) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.56.1-2) ...
No schema files found: removed existing output file.
Setting up d-shlibs (0.82) ...
Setting up gettext-base (0.19.8.1-6) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up libfreetype6:armhf (2.8.1-2) ...
Setting up libmagic-mgc (1:5.33-3) ...
Setting up libmagic1:armhf (1:5.33-3) ...
Setting up libgraphite2-3:armhf (1.3.11-2) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Setting up dwz (0.12-2) ...
Setting up autotools-dev (20180224.1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-6) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (0.042-1) ...
Setting up libharfbuzz0b:armhf (1.8.4-1+rpi1) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.33-3) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2.1) ...
Setting up libicu-le-hb0:armhf (1.0.3+git161113-5) ...
Setting up libicu60:armhf (60.2-6) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up gettext (0.19.8.1-6) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.20) ...
Setting up debhelper (11.3.5) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (0.042-1) ...
Setting up sbuild-build-depends-minimap-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-21+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-19 gcc-7_7.3.0-19 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-8+rpi1 linux-libc-dev_4.16.12-1+rpi1
Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3 binutils_2.30-21+rpi1 binutils-arm-linux-gnueabihf_2.30-21+rpi1 binutils-common_2.30-21+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32-0.1 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.3.0-3+rpi1 cpp-7_7.3.0-19 d-shlibs_0.82 dash_0.5.8-2.10 dbus_1.12.8-3 dbus-user-session_1.12.8-3 debconf_1.5.67 debhelper_11.3.5 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dirmngr_2.2.8-1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.2-1 e2fsprogs_1.44.2-1 e2fsprogs-l10n_1.44.2-1 fakeroot_1.22-2 fdisk_2.32-0.1 file_1:5.33-3 findutils_4.6.0+git+20171230-2 g++_4:7.3.0-3+rpi1 g++-7_7.3.0-19 gcc_4:7.3.0-3+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b7 gcc-5-base_5.5.0-8 gcc-7_7.3.0-19 gcc-7-base_7.3.0-19 gcc-8-base_8.1.0-8+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gnupg_2.2.8-1 gnupg-agent_2.2.8-1 gnupg-l10n_2.2.8-1 gnupg-utils_2.2.8-1 gpg_2.2.8-1 gpg-agent_2.2.8-1 gpg-wks-client_2.2.8-1 gpg-wks-server_2.2.8-1 gpgconf_2.2.8-1 gpgsm_2.2.8-1 gpgv_2.2.8-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-4 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-2 libasan4_7.3.0-19 libassuan0_2.5.1-2 libatomic1_8.1.0-8+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-21+rpi1 libblkid1_2.32-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-8+rpi1 libcilkrts5_7.3.0-19 libcom-err2_1.44.2-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.8-3 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.92-1+rpi1 libdrm2_2.4.92-1+rpi1 libelf1_0.170-0.5 libexpat1_2.2.5-3 libext2fs2_1.44.2-1 libfakeroot_1.22-2 libfdisk1_2.32-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libfreetype6_2.8.1-2 libgcc-7-dev_7.3.0-19 libgcc1_1:8.1.0-8+rpi1 libgcrypt20_1.8.3-1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8.1.0-8+rpi1 libgpg-error0_1.31-1 libgraphite2-3_1.3.11-2 libharfbuzz0b_1.8.4-1+rpi1 libhogweed4_3.4-1 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl19_0.19-1 libjson-c3_0.12.1-1.3 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-3 libmagic1_1:5.33-3 libmount1_2.32-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180210-4 libncurses6_6.1+20180210-4 libncursesw5_6.1+20180210-4 libncursesw6_6.1+20180210-4 libnettle6_3.4-1 libnpth0_1.5-4 libnss-systemd_238-4 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.24_5.24.1-4 libperl5.26_5.26.2-6 libpipeline1_1.5.0-1 libplymouth4_0.9.3-3 libpng16-16_1.6.34-1 libprocps7_2:3.3.15-2 libreadline7_7.0-5 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-2 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32-0.1 libsqlite3-0_3.24.0-1 libss2_1.44.2-1 libssl1.1_1.1.0h-4 libstdc++-7-dev_7.3.0-19 libstdc++6_8.1.0-8+rpi1 libsystemd0_238-4 libtasn1-6_4.13-3 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-4 libtinfo6_6.1+20180210-4 libtool_2.4.6-2.1 libubsan0_7.3.0-19 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32-0.1 libxml2_2.9.4+dfsg1-7 libzstd1_1.3.4+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.16.12-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mount_2.32-0.1 multiarch-support_2.27-3+rpi1 nano_2.9.8-1 ncurses-base_6.1+20180210-4 ncurses-bin_6.1+20180210-4 netbase_5.4 openssl_1.1.0h-4 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-6 perl-base_5.26.2-6 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-6 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-minimap-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-4 systemd-sysv_238-4 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-2 tzdata_2018e-1 udev_238-4 util-linux_2.32-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sun Jul 29 02:07:13 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./minimap_0.2-4.dsc
dpkg-source: info: extracting minimap in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking minimap_0.2.orig.tar.gz
dpkg-source: info: unpacking minimap_0.2-4.debian.tar.xz
dpkg-source: info: applying make_shared_lib
dpkg-source: info: applying hardening
dpkg-source: info: applying ensure_64bit_value
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-c40ba298-08f5-4533-b955-08f771bf9b8c
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package minimap
dpkg-buildpackage: info: source version 0.2-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build minimap-0.2
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -fr gmon.out *.o a.out minimap sdust minimap-lite *~ *.a *.dSYM session*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. main.c -o main.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. kthread.c -o kthread.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. misc.c -o misc.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. bseq.c -o bseq.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. sketch.c -o sketch.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. sdust.c -o sdust.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. index.c -o index.o
gcc -c -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I. map.c -o map.o
index.c: In function 'mm_idx_load':
index.c:317:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(&mi->freq_thres, sizeof(float), 1, fp);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
index.c:319:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(mi->len, 4, mi->n, fp);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
index.c:324:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(&l, 1, 1, fp);
^~~~~~~~~~~~~~~~~~~
index.c:326:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(mi->name[i], 1, l, fp);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
index.c:335:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(&b->n, 4, 1, fp);
^~~~~~~~~~~~~~~~~~~~~~
index.c:337:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(b->p, 8, b->n, fp);
^~~~~~~~~~~~~~~~~~~~~~~~
index.c:338:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(&size, 4, 1, fp);
^~~~~~~~~~~~~~~~~~~~~~
index.c:345:4: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
fread(x, 8, 2, fp);
^~~~~~~~~~~~~~~~~~
ar -csru libminimap.a kthread.o misc.o bseq.o sketch.o sdust.o index.o map.o
gcc -shared -o libminimap.so.0 kthread.o misc.o bseq.o sketch.o sdust.o index.o map.o -fPIC -Wl,-soname,libminimap.so.0 -lm -lz -lpthread -Wl,-z,relro -Wl,-z,now
ar: `u' modifier ignored since `D' is the default (see `U')
gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wc++-compat -Wno-unused-function -fPIC -Wl,-z,relro -Wl,-z,now main.o -o minimap -L. -lminimap -lm -lz -lpthread
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
ln -s libminimap.so.* libminimap.so
d-shlibmove --commit \
--multiarch \
--devunversioned \
--movedev "*.h" /usr/include/minimap \
libminimap.so
Library package automatic movement utility
--> zlib1g-dev package exists.
set -e
install -d -m 755 debian/libminimap-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libminimap0/usr/lib/arm-linux-gnueabihf
mv ./libminimap.a debian/libminimap-dev/usr/lib/arm-linux-gnueabihf
mv ./libminimap.la debian/libminimap-dev/usr/lib/arm-linux-gnueabihf || true
mv ./libminimap.so debian/libminimap-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/libminimap.so.0 debian/libminimap0/usr/lib/arm-linux-gnueabihf
PKGDEV=libminimap-dev
PKGSHL=libminimap0
install -d -m 755 debian/libminimap-dev//usr/include/minimap
mv *.h debian/libminimap-dev//usr/include/minimap
mv: cannot stat './libminimap.la': No such file or directory
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminimap0/usr/lib/arm-linux-gnueabihf/libminimap.so.0 was not linked against libm.so.6 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/minimap/usr/bin/minimap was not linked against libm.so.6 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libminimap-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: package libminimap-dev: unused substitution variable ${devlibs:Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'minimap' in '../minimap_0.2-4_armhf.deb'.
dpkg-deb: building package 'libminimap0' in '../libminimap0_0.2-4_armhf.deb'.
dpkg-deb: building package 'libminimap-dev' in '../libminimap-dev_0.2-4_armhf.deb'.
dpkg-deb: building package 'libminimap0-dbgsym' in '../libminimap0-dbgsym_0.2-4_armhf.deb'.
dpkg-deb: building package 'minimap-dbgsym' in '../minimap-dbgsym_0.2-4_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../minimap_0.2-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build minimap-0.2
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-07-31T05:04:27Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
minimap_0.2-4_armhf.changes:
----------------------------
Format: 1.8
Date: Sun, 29 Jul 2018 04:05:52 +0200
Source: minimap
Binary: minimap libminimap0 libminimap-dev
Architecture: armhf
Version: 0.2-4
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libminimap-dev - development headers for libminimap
libminimap0 - library for approximate mapping of long biosequences
minimap - tool for approximate mapping of long biosequences such as DNA rea
Changes:
minimap (0.2-4) unstable; urgency=medium
.
* Team upload.
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
* Drop unneeded Testsuite: autopkgtest
Checksums-Sha1:
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Checksums-Sha256:
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9d85b22a185cc5b8b200be0a1334ce854c2d80a46dd42492af5eafd33f6a430d 24280 minimap_0.2-4_armhf.deb
Files:
4c221a7b6aa0ac7a615fe7d6253ca06f 31208 libdevel optional libminimap-dev_0.2-4_armhf.deb
f2345d6df7e8e2da1baf07cb656ac416 42344 debug optional libminimap0-dbgsym_0.2-4_armhf.deb
804245b03ad47b305c921e4f2a726e94 20080 libs optional libminimap0_0.2-4_armhf.deb
f2616af18d02b12fcaaea5040b56e207 47220 debug optional minimap-dbgsym_0.2-4_armhf.deb
ca8b44812403e53756c6d1697089f1b7 6464 science optional minimap_0.2-4_armhf.buildinfo
4c433c6d1a923fabba4598301e779778 24280 science optional minimap_0.2-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libminimap-dev_0.2-4_armhf.deb
------------------------------
new Debian package, version 2.0.
size 31208 bytes: control archive=1024 bytes.
687 bytes, 17 lines control
724 bytes, 11 lines md5sums
Package: libminimap-dev
Source: minimap
Version: 0.2-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 110
Depends: libminimap0 (= 0.2-4), zlib1g-dev
Section: libdevel
Priority: optional
Homepage: https://github.com/lh3/minimap
Description: development headers for libminimap
Minimap is an experimental tool to efficiently find multiple approximate
mapping positions between two sets of long sequences, such as between
DNA reads and reference genomes, between genomes and between long noisy reads.
.
This package contains the C library headers for using minimap in custom tools,
along with a static library.
drwxr-xr-x root/root 0 2018-07-29 02:05 ./
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/include/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/include/minimap/
-rw-r--r-- root/root 359 2015-12-07 02:29 ./usr/include/minimap/bseq.h
-rw-r--r-- root/root 4294 2018-07-29 02:05 ./usr/include/minimap/kdq.h
-rw-r--r-- root/root 21313 2015-12-07 02:29 ./usr/include/minimap/khash.h
-rw-r--r-- root/root 8741 2015-12-07 02:29 ./usr/include/minimap/kseq.h
-rw-r--r-- root/root 5390 2015-12-07 02:29 ./usr/include/minimap/ksort.h
-rw-r--r-- root/root 3289 2015-12-07 02:29 ./usr/include/minimap/kvec.h
-rw-r--r-- root/root 3053 2015-12-07 02:29 ./usr/include/minimap/minimap.h
-rw-r--r-- root/root 539 2015-12-07 02:29 ./usr/include/minimap/sdust.h
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 45532 2018-07-29 02:05 ./usr/lib/arm-linux-gnueabihf/libminimap.a
lrwxrwxrwx root/root 0 2018-07-29 02:05 ./usr/lib/arm-linux-gnueabihf/libminimap.so -> libminimap.so.0
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/libminimap-dev/
-rw-r--r-- root/root 472 2018-07-29 02:05 ./usr/share/doc/libminimap-dev/changelog.Debian.gz
-rw-r--r-- root/root 2185 2018-07-29 02:05 ./usr/share/doc/libminimap-dev/copyright
libminimap0-dbgsym_0.2-4_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 42344 bytes: control archive=536 bytes.
377 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: libminimap0-dbgsym
Source: minimap
Version: 0.2-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 56
Depends: libminimap0 (= 0.2-4)
Section: debug
Priority: optional
Description: debug symbols for libminimap0
Build-Ids: 4eda8d36b544f0b60762ef8f3974e00ea7b4dac6
drwxr-xr-x root/root 0 2018-07-29 02:05 ./
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/.build-id/4e/
-rw-r--r-- root/root 46988 2018-07-29 02:05 ./usr/lib/debug/.build-id/4e/da8d36b544f0b60762ef8f3974e00ea7b4dac6.debug
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-07-29 02:05 ./usr/share/doc/libminimap0-dbgsym -> libminimap0
libminimap0_0.2-4_armhf.deb
---------------------------
new Debian package, version 2.0.
size 20080 bytes: control archive=888 bytes.
677 bytes, 17 lines control
228 bytes, 3 lines md5sums
25 bytes, 1 lines shlibs
67 bytes, 2 lines triggers
Package: libminimap0
Source: minimap
Version: 0.2-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 52
Depends: libc6 (>= 2.4), zlib1g (>= 1:1.1.4)
Section: libs
Priority: optional
Homepage: https://github.com/lh3/minimap
Description: library for approximate mapping of long biosequences
Minimap is an experimental tool to efficiently find multiple approximate
mapping positions between two sets of long sequences, such as between DNA
reads and reference genomes, between genomes and between long noisy reads.
.
This package contains a shared library offering the minimap API to custom C
programs.
drwxr-xr-x root/root 0 2018-07-29 02:05 ./
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 38408 2018-07-29 02:05 ./usr/lib/arm-linux-gnueabihf/libminimap.so.0
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/libminimap0/
-rw-r--r-- root/root 472 2018-07-29 02:05 ./usr/share/doc/libminimap0/changelog.Debian.gz
-rw-r--r-- root/root 2185 2018-07-29 02:05 ./usr/share/doc/libminimap0/copyright
minimap-dbgsym_0.2-4_armhf.deb
------------------------------
new Debian package, version 2.0.
size 47220 bytes: control archive=528 bytes.
365 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: minimap-dbgsym
Source: minimap
Version: 0.2-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 62
Depends: minimap (= 0.2-4)
Section: debug
Priority: optional
Description: debug symbols for minimap
Build-Ids: 734a93fbd05317473d1d328946c24bc15469e303
drwxr-xr-x root/root 0 2018-07-29 02:05 ./
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/lib/debug/.build-id/73/
-rw-r--r-- root/root 53004 2018-07-29 02:05 ./usr/lib/debug/.build-id/73/4a93fbd05317473d1d328946c24bc15469e303.debug
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-07-29 02:05 ./usr/share/doc/minimap-dbgsym -> minimap
minimap_0.2-4_armhf.deb
-----------------------
new Debian package, version 2.0.
size 24280 bytes: control archive=960 bytes.
972 bytes, 20 lines control
258 bytes, 4 lines md5sums
Package: minimap
Version: 0.2-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 58
Depends: libc6 (>= 2.4), zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: https://github.com/lh3/minimap
Description: tool for approximate mapping of long biosequences such as DNA reads
Minimap is an experimental tool to efficiently find multiple approximate
mapping positions between two sets of long biological sequences, such as
between DNA reads and reference genomes, between genomes and between long
noisy reads.
Minimap does not generate alignments as of now and because of this, it is
usually tens of times faster than mainstream aligners.
It does not replace mainstream aligners, but it can be useful when you
want to quickly identify long approximate matches at moderate divergence among
a huge collection of sequences. For this task, it is much faster than most
existing tools.
drwxr-xr-x root/root 0 2018-07-29 02:05 ./
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/bin/
-rwxr-xr-x root/root 42660 2018-07-29 02:05 ./usr/bin/minimap
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/doc/minimap/
-rw-r--r-- root/root 472 2018-07-29 02:05 ./usr/share/doc/minimap/changelog.Debian.gz
-rw-r--r-- root/root 2185 2018-07-29 02:05 ./usr/share/doc/minimap/copyright
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/man/
drwxr-xr-x root/root 0 2018-07-29 02:05 ./usr/share/man/man1/
-rw-r--r-- root/root 2365 2018-07-29 02:05 ./usr/share/man/man1/minimap.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 1516
Build-Time: 37
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 290
Job: minimap_0.2-4
Machine Architecture: armhf
Package: minimap
Package-Time: 380
Source-Version: 0.2-4
Space: 1516
Status: successful
Version: 0.2-4
--------------------------------------------------------------------------------
Finished at 2018-07-31T05:04:27Z
Build needed 00:06:20, 1516k disc space