macs →
2.2.7.1-6 →
armhf → 2022-11-26 07:32:00
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| macs 2.2.7.1-6 (armhf) Sat, 26 Nov 2022 06:57:23 +0000 |
+==============================================================================+
Package: macs
Version: 2.2.7.1-6
Source Version: 2.2.7.1-6
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-20aa8909-a5a0-4d48-beb5-eb848d77f199' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.4 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.7 MB in 11s (2558 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'macs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/macs.git
Please use:
git clone https://salsa.debian.org/med-team/macs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 136 MB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (dsc) [2102 B]
Get:2 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (tar) [135 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (diff) [1268 kB]
Fetched 136 MB in 14s (9455 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/macs-AW7P7d/macs-2.2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/macs-AW7P7d' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-2u5SyO/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-2u5SyO/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-2u5SyO/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (9002 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap libperl5.34 netbase perl-modules-5.34 sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 77 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (66.5 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14774 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
dpkg-deb: building package 'sbuild-build-depends-macs-dummy' in '/<<BUILDDIR>>/resolver-2u5SyO/apt_archive/sbuild-build-depends-macs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-macs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Sources [543 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ Packages [623 B]
Fetched 2499 B in 0s (11.9 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install macs build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap libperl5.34 netbase perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils bsdutils
ca-certificates cpp-12 cython3 debhelper dh-autoreconf dh-python
dh-strip-nondeterminism dwz file g++-12 gcc-12 gcc-12-base gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libasan8 libatomic1 libblas3 libblkid1 libcc1-0 libdebhelper-perl libelf1
libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgcc-12-dev
libgcc-s1 libgfortran5 libgomp1 libicu72 libjs-jquery libjs-sphinxdoc
libjs-underscore liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1
libmount1 libmpdec3 libncurses6 libpipeline1 libprocps8 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev
libpython3.10-minimal libpython3.10-stdlib libsmartcols1 libssl3
libstdc++-12-dev libstdc++6 libsub-override-perl libtool libubsan1
libuchardet0 libuuid1 libxml2 m4 man-db media-types mount openssl po-debconf
procps python3 python3-all python3-all-dev python3-attr python3-dev
python3-distutils python3-iniconfig python3-lib2to3 python3-minimal
python3-more-itertools python3-numpy python3-packaging python3-pip
python3-pkg-resources python3-pluggy python3-py python3-pyparsing
python3-pytest python3-setuptools python3-tomli python3-wheel python3.10
python3.10-dev python3.10-minimal util-linux util-linux-extra zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc gcc-12-locales cpp-12-doc
cython-doc dh-make flit python3-build python3-installer gcc-12-doc
gettext-doc libasprintf-dev libgettextpo-dev groff cryptsetup-bin
libstdc++-12-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser nfs-common libmail-box-perl python3-doc python3-tk
python3-venv python-attr-doc gfortran python-numpy-doc subversion
python-pyparsing-doc python-setuptools-doc python3.10-venv python3.10-doc
binfmt-support dosfstools kbd util-linux-locales
Recommended packages:
curl | wget | lynx libarchive-cpio-perl javascript-common libgpm2
libltdl-dev uuid-runtime libmail-sendmail-perl psmisc python3-pygments
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libblas3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgfortran5 libicu72 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl
libmagic-mgc libmagic1 libmpdec3 libncurses6 libpipeline1 libprocps8
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10
libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types
openssl po-debconf procps python3 python3-all python3-all-dev python3-attr
python3-dev python3-distutils python3-iniconfig python3-lib2to3
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pip python3-pkg-resources python3-pluggy python3-py
python3-pyparsing python3-pytest python3-setuptools python3-tomli
python3-wheel python3.10 python3.10-dev python3.10-minimal
sbuild-build-depends-macs-dummy zlib1g-dev
The following packages will be upgraded:
bsdutils cpp-12 g++-12 gcc-12 gcc-12-base libasan8 libatomic1 libblkid1
libcc1-0 libgcc-12-dev libgcc-s1 libgomp1 libmount1 libsmartcols1 libssl3
libstdc++-12-dev libstdc++6 libubsan1 libuuid1 mount util-linux
util-linux-extra
22 upgraded, 81 newly installed, 0 to remove and 55 not upgraded.
Need to get 79.5 MB of archives.
After this operation, 170 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2u5SyO/apt_archive ./ sbuild-build-depends-macs-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf bsdutils armhf 1:2.38.1-3 [83.8 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libsmartcols1 armhf 2.38.1-3 [91.0 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf util-linux-extra armhf 2.38.1-3 [97.9 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf util-linux armhf 2.38.1-3 [1062 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf liblocale-gettext-perl armhf 1.07-4+b3 [14.6 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf mount armhf 2.38.1-3 [125 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-9+rpi1 [32.2 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-9+rpi1 [95.4 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-9+rpi1 [8224 B]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-9+rpi1 [2089 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-9+rpi1 [861 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-9+rpi1 [37.2 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-9+rpi1 [504 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-9+rpi1 [7913 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-9+rpi1 [2025 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-9+rpi1 [725 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-9+rpi1 [14.2 MB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-9+rpi1 [7156 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-9+rpi1 [36.1 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-1 [1614 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.8-3 [769 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.8-3 [1478 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libuuid1 armhf 2.38.1-3 [27.1 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.8-3 [1597 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.8-3 [506 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-1 [38.2 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libblkid1 armhf 2.38.1-3 [130 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libmount1 armhf 2.38.1-3 [143 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-3 [78.7 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libncurses6 armhf 6.3+20220423-2 [79.6 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libprocps8 armhf 2:3.3.17-7.1 [41.9 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:3.3.17-7.1 [457 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.32-1 [1224 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.1 [80.8 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-4 [526 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-2 [9008 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.1 [941 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf help2man armhf 1.49.2 [202 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.10.1-2 [109 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-9+rpi1 [238 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-2 [116 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 4.5.0-4 [142 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.10.1-2 [1587 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10 armhf 3.10.8-3 [1458 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4.1 [183 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-dev armhf 3.10.8-3 [2935 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.10.6-1 [22.0 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libpython3-all-dev armhf 3.10.6-1 [1068 B]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.10.6-1 [1060 B]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf python3.10-dev armhf 3.10.8-3 [509 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.10.6-1 [25.4 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.10.6-1 [1068 B]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf python3-attr all 22.1.0-1 [64.1 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf python3-more-itertools all 8.10.0-2 [53.0 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.5.0-1 [278 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf python3-numpy armhf 1:1.21.5-2 [3409 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf python3-pyparsing all 3.0.7-3 [136 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf python3-packaging all 21.3-1.1 [34.2 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.5.0-1 [519 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf python3-wheel all 0.38.4-1 [30.8 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf python3-pip all 22.3+dfsg-1 [1322 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf python3-pluggy all 1.0.0+repack-1 [19.7 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf python3-py all 1.11.0-1 [89.2 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf python3-tomli all 2.0.1-1 [18.1 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest all 7.1.2-4 [218 kB]
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Setting up mount (2.38.1-3) ...
Setting up libasan8:armhf (12.2.0-9+rpi1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up openssl (3.0.7-1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1) ...
Setting up libcc1-0:armhf (12.2.0-9+rpi1) ...
Setting up liblocale-gettext-perl (1.07-4+b3) ...
Setting up libprocps8:armhf (2:3.3.17-7.1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up liblapack3:armhf (3.10.1-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up gettext (0.21-10) ...
Setting up libtool (2.4.7-4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up help2man (1.49.2) ...
Setting up libpython3.10-stdlib:armhf (3.10.8-3) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up libgcc-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up libjs-sphinxdoc (4.5.0-4) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up dwz (0.14+20220924-2) ...
Setting up groff-base (1.22.4-8) ...
Setting up procps (2:3.3.17-7.1) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up libpython3.10:armhf (3.10.8-3) ...
Setting up python3.10 (3.10.8-3) ...
Setting up libstdc++-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.10.6-1) ...
Setting up man-db (2.11.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-pyparsing (3.0.7-3) ...
Setting up gcc-12 (12.2.0-9+rpi1) ...
Setting up cython3 (0.29.32-1) ...
Setting up libpython3.10-dev:armhf (3.10.8-3) ...
Setting up python3-pluggy (1.0.0+repack-1) ...
Setting up python3.10-dev (3.10.8-3) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up g++-12 (12.2.0-9+rpi1) ...
Setting up python3-pkg-resources (65.5.0-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up python3-more-itertools (8.10.0-2) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-attr (22.1.0-1) ...
Setting up libpython3-dev:armhf (3.10.6-1) ...
Setting up python3-setuptools (65.5.0-1) ...
Setting up python3-tomli (2.0.1-1) ...
Setting up python3-py (1.11.0-1) ...
Setting up python3-all (3.10.6-1) ...
Setting up debhelper (13.11.1) ...
Setting up python3-wheel (0.38.4-1) ...
Setting up python3-packaging (21.3-1.1) ...
Setting up libpython3-all-dev:armhf (3.10.6-1) ...
Setting up python3-dev (3.10.6-1) ...
Setting up python3-pip (22.3+dfsg-1) ...
Setting up python3-numpy (1:1.21.5-2) ...
Setting up python3-all-dev (3.10.6-1) ...
Setting up python3-pytest (7.1.2-4) ...
Setting up sbuild-build-depends-macs-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-9+rpi1 gcc-12_12.2.0-9+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-9+rpi1 libstdc++6_12.2.0-9+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 apt_2.5.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-3 bsdutils_1:2.38.1-3 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-9+rpi1 cython3_0.29.32-1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.11.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-9+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-9+rpi1 gcc-12-base_12.2.0-9+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 help2man_1.49.2 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 krb5-locales_1.20-1 libacl1_2.3.1-1 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-9+rpi1 libassuan0_2.5.5-4 libatomic1_12.2.0-9+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39-6+rpi1 libblas3_3.10.1-2 libblkid1_2.38.1-3 libbz2-1.0_1.0.8-5+b2 libc-bin_2.35-2+rpi1 libc-dev-bin_2.35-2+rpi1 libc6_2.35-2+rpi1 libc6-dev_2.35-2+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-9+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-6+rpi1 libctf0_2.39-6+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.11.1 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-12-dev_12.2.0-9+rpi1 libgcc-s1_12.2.0-9+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-9+rpi1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-9+rpi1 libgpg-error0_1.45-2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu72_72.1-2 libidn2-0_2.3.3-1 libisl23_0.25-1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_4.5.0-4 libjs-underscore_1.13.4~dfsg+~1.11.4-2 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 liblapack3_3.10.1-2 libldap-2.5-0_2.5.13+dfsg-2+rpi1 liblocale-gettext-perl_1.07-4+b3 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38.1-3 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-1+b2 libpcre3_2:8.39-14 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.7-1 libprocps8_2:3.3.17-7.1 libpython3-all-dev_3.10.6-1 libpython3-dev_3.10.6-1 libpython3-stdlib_3.10.6-1 libpython3.10_3.10.8-3 libpython3.10-dev_3.10.8-3 libpython3.10-minimal_3.10.8-3 libpython3.10-stdlib_3.10.8-3 libreadline8_8.2-1 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsmartcols1_2.38.1-3 libsqlite3-0_3.39.4-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-9+rpi1 libstdc++6_12.2.0-9+rpi1 libsub-override-perl_0.09-4 libsystemd0_251.5-1+rpi1 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libubsan1_12.2.0-9+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-3 libxml2_2.9.14+dfsg-1.1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-3 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 openssl_3.0.7-1 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 procps_2:3.3.17-7.1 python3_3.10.6-1 python3-all_3.10.6-1 python3-all-dev_3.10.6-1 python3-attr_22.1.0-1 python3-dev_3.10.6-1 python3-distutils_3.10.8-1 python3-iniconfig_1.1.1-2 python3-lib2to3_3.10.8-1 python3-minimal_3.10.6-1 python3-more-itertools_8.10.0-2 python3-numpy_1:1.21.5-2 python3-packaging_21.3-1.1 python3-pip_22.3+dfsg-1 python3-pkg-resources_65.5.0-1 python3-pluggy_1.0.0+repack-1 python3-py_1.11.0-1 python3-pyparsing_3.0.7-3 python3-pytest_7.1.2-4 python3-setuptools_65.5.0-1 python3-tomli_2.0.1-1 python3-wheel_0.38.4-1 python3.10_3.10.8-3 python3.10-dev_3.10.8-3 python3.10-minimal_3.10.8-3 raspbian-archive-keyring_20120528.2 readline-common_8.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-macs-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 util-linux_2.38.1-3 util-linux-extra_2.38.1-3 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.Czn11dQv/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 24 11:32:00 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./macs_2.2.7.1-6.dsc
dpkg-source: info: extracting macs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking macs_2.2.7.1.orig.tar.gz
dpkg-source: info: unpacking macs_2.2.7.1-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling
dpkg-source: info: applying keep_debug
dpkg-source: info: applying link-libm.patch
dpkg-source: info: applying no-pip.patch
dpkg-source: info: applying enable_python3.10.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-20aa8909-a5a0-4d48-beb5-eb848d77f199
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package macs
dpkg-buildpackage: info: source version 2.2.7.1-6
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:240: python3.10 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.10' does not exist -- can't clean it
rm -Rf test/macs2.2.7.1-6* test/speedtest*
rm -f debian/*.1 debian/*-man-include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:240: python3.10 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for pyx in $(find MACS2/ -name "*.pyx"); do \
rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done
dh_auto_build
I: pybuild base:240: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/Constants.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO
copying MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO
copying MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
copying MACS2/khash.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2
running build_ext
cythoning MACS2/Prob.pyx to MACS2/Prob.c
cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c
cythoning MACS2/Pileup.pyx to MACS2/Pileup.c
cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c
cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c
cythoning MACS2/Signal.pyx to MACS2/Signal.c
cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c
cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c
cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c
cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c
cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c
cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c
cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c
building 'MACS2.Prob' extension
creating build
creating build/temp.linux-armhf-cpython-310
creating build/temp.linux-armhf-cpython-310/MACS2
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/Prob.c -o build/temp.linux-armhf-cpython-310/MACS2/Prob.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/Prob.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Prob.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.Parser' extension
creating build/temp.linux-armhf-cpython-310/MACS2/IO
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/IO/Parser.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/Parser.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/Parser.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/Parser.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.Pileup' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/Pileup.c -o build/temp.linux-armhf-cpython-310/MACS2/Pileup.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/cPosValCalculation.c -o build/temp.linux-armhf-cpython-310/MACS2/cPosValCalculation.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/Pileup.o build/temp.linux-armhf-cpython-310/MACS2/cPosValCalculation.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Pileup.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.PeakModel' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/PeakModel.c -o build/temp.linux-armhf-cpython-310/MACS2/PeakModel.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/PeakModel.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/PeakModel.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.PeakDetect' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c MACS2/PeakDetect.c -o build/temp.linux-armhf-cpython-310/MACS2/PeakDetect.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/PeakDetect.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/PeakDetect.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.Signal' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/Signal.c -o build/temp.linux-armhf-cpython-310/MACS2/Signal.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/Signal.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Signal.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.PeakIO' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c MACS2/IO/PeakIO.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/PeakIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/PeakIO.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/PeakIO.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraphIO' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/BedGraphIO.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/BedGraphIO.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.FixWidthTrack' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/FixWidthTrack.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/FixWidthTrack.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.PairedEndTrack' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/PairedEndTrack.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/PairedEndTrack.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraph' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c MACS2/IO/BedGraph.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/BedGraph.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/BedGraph.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/BedGraph.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.ScoreTrack' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/ScoreTrack.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/ScoreTrack.cpython-310-arm-linux-gnueabihf.so
building 'MACS2.IO.CallPeakUnit' extension
arm-linux-gnueabihf-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-armhf-cpython-310/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-310/MACS2/IO/CallPeakUnit.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/CallPeakUnit.cpython-310-arm-linux-gnueabihf.so
running build_scripts
creating build/scripts-3.10
copying and adjusting bin/macs2 -> build/scripts-3.10
changing mode of build/scripts-3.10/macs2 from 644 to 755
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info \
--name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs2" > debian/macs2.1
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \
"[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \
> debian/macs2_${subcommand}-man-include; done
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info --version-string="2.2.7.1" \
--include debian/macs2_${subcommand}-man-include \
"python3 bin/macs2 ${subcommand}" > \
debian/macs2_${subcommand}.1; done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test
I: pybuild base:240: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build; python3.10 -m pytest test
============================= test session starts ==============================
platform linux -- Python 3.10.8, pytest-7.1.2, pluggy-1.0.0+repack
rootdir: /<<PKGBUILDDIR>>
collected 42 items
test/test_BedGraph.py .... [ 9%]
test/test_FixWidthTrack.py .... [ 19%]
test/test_PairedEndTrack.py .... [ 28%]
test/test_Parser.py ... [ 35%]
test/test_PeakIO.py ... [ 42%]
test/test_Pileup.py .. [ 47%]
test/test_Prob.py ................ [ 85%]
test/test_ScoreTrack.py .... [ 95%]
test/test_Signal.py s. [100%]
======================== 41 passed, 1 skipped in 1.76s =========================
cd test && for PY3VER in 3.10; do \
export PATH=/<<PKGBUILDDIR>>/build/scripts-${PY3VER}:$PATH \
&& export PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_${PY3VER}_MACS2/build \
&& ./cmdlinetest macs2.2.7.1-6-${PY3VER} ; done
1. callpeak
1.1 callpeak narrow
1.2 callpeak broad
1.3 callpeak on PE narrow/broad
2. pileup
3. filterdup
4. predictd
5. randsample
6. refinepeak
7. bdgcmp
8. bdgpeakcall
9. bdgbroadcall
10. bdgdiff
11. cmbreps
12. bdgopt
13. 50k contigs with buffersize
13.1 callpeak
13.2 filterdup
13.3 pileup
13.4 randsample
14. search for errors or warnings in log files
checking macs2.2.7.1-6-3.10_run_50kcontigs/run_callpeak_50kcontigs.log...
... clear!
checking macs2.2.7.1-6-3.10_run_50kcontigs/run_filterdup_50kcontigs.log...
... clear!
checking macs2.2.7.1-6-3.10_run_50kcontigs/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-6-3.10_run_50kcontigs/run_randsample.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgcmp/run_bdgcmp.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgdiff/run_bdgdiff_w_o_file.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgdiff/run_bdgdiff_w_prefix.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgopt/run_bdgopt_max.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgopt/run_bdgopt_min.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgpeakcall/run_bdgpeakcall_cutoff.log...
... clear!
checking macs2.2.7.1-6-3.10_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_broad/run_callpeak_broad.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow0.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow1.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow2.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow3.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow4.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow/run_callpeak_narrow5.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_pe_broad/run_callpeak_bampe_broad.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log...
... clear!
checking macs2.2.7.1-6-3.10_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log...
... clear!
checking macs2.2.7.1-6-3.10_run_cmbreps/run_cmbreps_fisher.log...
... clear!
checking macs2.2.7.1-6-3.10_run_cmbreps/run_cmbreps_max.log...
... clear!
checking macs2.2.7.1-6-3.10_run_cmbreps/run_cmbreps_mean.log...
... clear!
checking macs2.2.7.1-6-3.10_run_filterdup/run_filterdup.log...
... clear!
checking macs2.2.7.1-6-3.10_run_filterdup/run_filterdup_d.log...
... clear!
checking macs2.2.7.1-6-3.10_run_filterdup/run_filterdup_pe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_filterdup/run_filterdup_pe_d.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_CTRL.bed.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_CTRLPE.bampe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_CTRLPE.bedpe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_ChIPPE.bampe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_pileup/run_pileup_ChIPPE.bedpe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_predictd/run_predictd.log...
... clear!
checking macs2.2.7.1-6-3.10_run_randsample/run_randsample.log...
... clear!
checking macs2.2.7.1-6-3.10_run_randsample/run_randsample_bampe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_randsample/run_randsample_bedpe.log...
... clear!
checking macs2.2.7.1-6-3.10_run_refinepeak/run_refinepeak_w_ofile.log...
... clear!
checking macs2.2.7.1-6-3.10_run_refinepeak/run_refinepeak_w_prefix.log...
... clear!
15. compare with standard outputs
14.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ...
... success!
14.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ...
... success!
14.1.3 checking 50kcontigs run_filterdup_result.bed ...
... success!
14.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ...
... success!
14.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ...
... success!
14.3.1 checking bdgcmp run_bdgcmp_FE.bdg ...
... success!
14.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ...
... success!
14.4.1 checking bdgdiff common.bed ...
... success!
14.4.2 checking bdgdiff cond1.bed ...
... success!
14.4.3 checking bdgdiff cond2.bed ...
... success!
14.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ...
... success!
14.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ...
... success!
14.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ...
... success!
14.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ...
... success!
14.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ...
... success!
14.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ...
... success!
14.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ...
... success!
14.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ...
... success!
14.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ...
... success!
14.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ...
... success!
14.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ...
... success!
14.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ...
... success!
14.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ...
... success!
14.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ...
... success!
14.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ...
... success!
14.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ...
... success!
14.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ...
... success!
14.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ...
... success!
14.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ...
... success!
14.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ...
... success!
14.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ...
... success!
14.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ...
... success!
14.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ...
... success!
14.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ...
... success!
14.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ...
... success!
14.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ...
... success!
14.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ...
... success!
14.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ...
... success!
14.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ...
... success!
14.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ...
... success!
14.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ...
... success!
14.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ...
... success!
14.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ...
... success!
14.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ...
... success!
14.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ...
... success!
14.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ...
... success!
14.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ...
... success!
14.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ...
... success!
14.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ...
... success!
14.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ...
... success!
14.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ...
... success!
14.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ...
... success!
14.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ...
... success!
14.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ...
... success!
14.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ...
... success!
14.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ...
... success!
14.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ...
... success!
14.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ...
... success!
14.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ...
... success!
14.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ...
... success!
14.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ...
... success!
14.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ...
... success!
14.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ...
... success!
14.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ...
... success!
14.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ...
... success!
14.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ...
... success!
14.11.1 checking cmbreps run_cmbreps_fisher.bdg ...
... success!
14.11.2 checking cmbreps run_cmbreps_max.bdg ...
... success!
14.11.3 checking cmbreps run_cmbreps_mean.bdg ...
... success!
14.12.1 checking filterdup run_filterdup_result.bed ...
... success!
14.12.2 checking filterdup run_filterdup_result_pe.bedpe ...
... success!
14.13.1 checking pileup run_pileup_CTRL.bed.bdg ...
... success!
14.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ...
... success!
14.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ...
... success!
14.13.4 checking pileup run_pileup_ChIP.bed.bdg ...
... success!
14.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ...
... success!
14.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ...
... success!
14.14.1 checking refinepeak run_refinepeak_w_ofile.bed ...
... success!
14.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ...
... success!
14.15.1 checking bdgopt run_bdgopt_max.bdg ...
... success!
14.15.2 checking bdgopt run_bdgopt_min.bdg ...
... success!
16. brief speed test
CPU time (mm:ss): 00:04:10
Max mem (KB): 180252
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install --destdir=debian/macs/ -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/macs
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running build_ext
skipping 'MACS2/Prob.c' Cython extension (up-to-date)
skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date)
skipping 'MACS2/Pileup.c' Cython extension (up-to-date)
skipping 'MACS2/PeakModel.c' Cython extension (up-to-date)
skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date)
skipping 'MACS2/Signal.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date)
skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date)
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/macs/usr
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Constants.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/Parser.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/PeakIO.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/BedGraphIO.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/FixWidthTrack.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/PairedEndTrack.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/BedGraph.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/ScoreTrack.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/CallPeakUnit.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/IO/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/khash.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Prob.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Pileup.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/PeakModel.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/PeakDetect.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/Signal.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/Constants.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/callpeak_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/OptValidator.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/OutputWriter.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/pileup_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/filterdup_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/predictd_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/randsample_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/refinepeak_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/bdgcmp_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/bdgpeakcall_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/bdgbroadcall_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/bdgdiff_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/cmbreps_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_MACS2/build/MACS2/__pycache__/bdgopt_cmd.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__pycache__
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/Constants.py to Constants.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/OptValidator.py to OptValidator.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/OutputWriter.py to OutputWriter.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2/IO/__init__.py to __init__.cpython-310.pyc
running install_egg_info
running egg_info
creating MACS2.egg-info
writing MACS2.egg-info/PKG-INFO
writing dependency_links to MACS2.egg-info/dependency_links.txt
writing requirements to MACS2.egg-info/requires.txt
writing top-level names to MACS2.egg-info/top_level.txt
writing manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching '.gitignore'
warning: no previously-included files found matching '.travis.yml'
no previously-included directories found matching '.github'
no previously-included directories found matching 'DOCKER'
adding license file 'LICENSE'
writing manifest file 'MACS2.egg-info/SOURCES.txt'
Copying MACS2.egg-info to /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.10/dist-packages/MACS2-2.2.7.1.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/macs/usr/bin
copying build/scripts-3.10/macs2 -> /<<PKGBUILDDIR>>/debian/macs/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/macs/usr/bin/macs2 to 755
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installexamples -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_lintian -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_2.2.7.1-6_armhf.deb'.
dpkg-deb: building package 'macs' in '../macs_2.2.7.1-6_armhf.deb'.
dpkg-genbuildinfo --build=any -O../macs_2.2.7.1-6_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../macs_2.2.7.1-6_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-11-26T07:31:57Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
macs_2.2.7.1-6_armhf.changes:
-----------------------------
Format: 1.8
Date: Thu, 24 Nov 2022 12:18:59 +0100
Source: macs
Binary: macs macs-dbgsym
Architecture: armhf
Version: 2.2.7.1-6
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
macs - Model-based Analysis of ChIP-Seq on short reads sequencers
Changes:
macs (2.2.7.1-6) unstable; urgency=medium
.
* Fix watch file
* Standards-Version: 4.6.1
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
macs-dbgsym_2.2.7.1-6_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 6612932 bytes: control archive=1192 bytes.
855 bytes, 12 lines control
1462 bytes, 14 lines md5sums
Package: macs-dbgsym
Source: macs
Version: 2.2.7.1-6
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 6891
Depends: macs (= 2.2.7.1-6)
Section: debug
Priority: optional
Description: debug symbols for macs
Build-Ids: 0b2785422ab298e9486489e34470031345c61205 0b2c589681440922d729b5439843118abe2664e5 1d8a0eb84638fd0a2f76be4e11e512af1681a4c6 28624278a9af33692d443ae4568f649b85b5a3a7 3743a31a43e22d510e28969be480bf3d0bee272c 3971268899495d45f9b5aae3fd1230e8d63720a1 4914182b99d6853bcbd9cfb38c0542fb1f58dd1c 53eb234bc368c5db40a76c9964aa329e64c6b25d a9f9cd820718c660a9801023274c50a4d41c7e25 b735ebd2f0b73e81451406dd1e36901d0b6f8a80 d6f68ca7faa860419368c5e39cff2a1eb5fb81d5 e1916af5125d814c35b27b48066ba7b132b4701b f75a3bb3dca45dcd2e9bbfa867c02bc65f800dbc
drwxr-xr-x root/root 0 2022-11-24 11:18 ./
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/0b/
-rw-r--r-- root/root 845760 2022-11-24 11:18 ./usr/lib/debug/.build-id/0b/2785422ab298e9486489e34470031345c61205.debug
-rw-r--r-- root/root 433136 2022-11-24 11:18 ./usr/lib/debug/.build-id/0b/2c589681440922d729b5439843118abe2664e5.debug
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/39/
-rw-r--r-- root/root 177136 2022-11-24 11:18 ./usr/lib/debug/.build-id/39/71268899495d45f9b5aae3fd1230e8d63720a1.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/49/
-rw-r--r-- root/root 746708 2022-11-24 11:18 ./usr/lib/debug/.build-id/49/14182b99d6853bcbd9cfb38c0542fb1f58dd1c.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/53/
-rw-r--r-- root/root 645296 2022-11-24 11:18 ./usr/lib/debug/.build-id/53/eb234bc368c5db40a76c9964aa329e64c6b25d.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/a9/
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/b7/
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/d6/
-rw-r--r-- root/root 1099900 2022-11-24 11:18 ./usr/lib/debug/.build-id/d6/f68ca7faa860419368c5e39cff2a1eb5fb81d5.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/e1/
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root 921228 2022-11-24 11:18 ./usr/lib/debug/.build-id/f7/5a3bb3dca45dcd2e9bbfa867c02bc65f800dbc.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 24192 2022-11-24 11:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/macs.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-11-24 11:18 ./usr/share/doc/macs-dbgsym -> macs
macs_2.2.7.1-6_armhf.deb
------------------------
new Debian package, version 2.0.
size 2342608 bytes: control archive=2908 bytes.
957 bytes, 18 lines control
5255 bytes, 60 lines md5sums
255 bytes, 12 lines * postinst #!/bin/sh
368 bytes, 12 lines * prerm #!/bin/sh
Package: macs
Version: 2.2.7.1-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 5633
Depends: python3 (<< 3.11), python3 (>= 3.10~), python3-numpy, python3:any, libc6 (>= 2.29)
Section: science
Priority: optional
Homepage: https://github.com/taoliu/MACS/
Description: Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
drwxr-xr-x root/root 0 2022-11-24 11:18 ./
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/bin/
-rwxr-xr-x root/root 67796 2022-11-24 11:18 ./usr/bin/macs2
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/
-rw-r--r-- root/root 25704 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/dependency_links.txt
-rw-r--r-- root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/requires.txt
-rw-r--r-- root/root 6 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/top_level.txt
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/
-rw-r--r-- root/root 845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/Constants.py
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/
-rw-r--r-- root/root 406852 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraph.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 135060 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraphIO.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 468940 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/CallPeakUnit.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 337332 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/FixWidthTrack.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 270404 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/PairedEndTrack.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 470952 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/Parser.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 551316 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/PeakIO.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 607040 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/ScoreTrack.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 0 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/IO/__init__.py
-rw-r--r-- root/root 28454 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OptValidator.py
-rw-r--r-- root/root 10842 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OutputWriter.py
-rw-r--r-- root/root 137456 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/PeakDetect.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 269324 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/PeakModel.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 268048 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Pileup.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 136184 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Prob.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 138392 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Signal.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 24 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/__init__.py
-rw-r--r-- root/root 2141 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgbroadcall_cmd.py
-rw-r--r-- root/root 3712 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgcmp_cmd.py
-rw-r--r-- root/root 4318 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgdiff_cmd.py
-rw-r--r-- root/root 2388 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgopt_cmd.py
-rw-r--r-- root/root 2696 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgpeakcall_cmd.py
-rw-r--r-- root/root 1157 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cPosValCalculation.pxd
-rw-r--r-- root/root 19674 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/callpeak_cmd.py
-rw-r--r-- root/root 1944 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cmbreps_cmd.py
-rw-r--r-- root/root 9715 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/diffpeak_cmd.py
-rw-r--r-- root/root 4583 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/filterdup_cmd.py
-rw-r--r-- root/root 3199 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/khash.pxd
-rw-r--r-- root/root 3964 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/pileup_cmd.py
-rw-r--r-- root/root 3178 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/predictd_cmd.py
-rw-r--r-- root/root 3888 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/randsample_cmd.py
-rw-r--r-- root/root 6845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/refinepeak_cmd.py
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 107 2022-11-24 11:18 ./usr/share/lintian/overrides/macs
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/man/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/man/man1/
-rw-r--r-- root/root 1122 2022-11-24 11:18 ./usr/share/man/man1/macs2.1.gz
-rw-r--r-- root/root 927 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgbroadcall.1.gz
-rw-r--r-- root/root 1394 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgcmp.1.gz
-rw-r--r-- root/root 1193 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgdiff.1.gz
-rw-r--r-- root/root 902 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgopt.1.gz
-rw-r--r-- root/root 914 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgpeakcall.1.gz
-rw-r--r-- root/root 5690 2022-11-24 11:18 ./usr/share/man/man1/macs2_callpeak.1.gz
-rw-r--r-- root/root 774 2022-11-24 11:18 ./usr/share/man/man1/macs2_cmbreps.1.gz
-rw-r--r-- root/root 1945 2022-11-24 11:18 ./usr/share/man/man1/macs2_filterdup.1.gz
-rw-r--r-- root/root 1755 2022-11-24 11:18 ./usr/share/man/man1/macs2_pileup.1.gz
-rw-r--r-- root/root 1662 2022-11-24 11:18 ./usr/share/man/man1/macs2_predictd.1.gz
-rw-r--r-- root/root 1545 2022-11-24 11:18 ./usr/share/man/man1/macs2_randsample.1.gz
-rw-r--r-- root/root 1334 2022-11-24 11:18 ./usr/share/man/man1/macs2_refinepeak.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 1428488
Build-Time: 1340
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 690
Job: macs_2.2.7.1-6
Machine Architecture: armhf
Package: macs
Package-Time: 2074
Source-Version: 2.2.7.1-6
Space: 1428488
Status: successful
Version: 2.2.7.1-6
--------------------------------------------------------------------------------
Finished at 2022-11-26T07:31:57Z
Build needed 00:34:34, 1428488k disk space