macs →
2.2.7.1-6+b1 →
armhf → 2023-02-01 07:13:33
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| macs 2.2.7.1-6+b1 (armhf) Wed, 01 Feb 2023 06:36:27 +0000 |
+==============================================================================+
Package: macs
Version: 2.2.7.1-6+b1
Source Version: 2.2.7.1-6
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-0e5fd62c-6a8e-4705-b028-b91269c2bd8b' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.6 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.4 MB]
Fetched 28.1 MB in 29s (965 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'macs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/macs.git
Please use:
git clone https://salsa.debian.org/med-team/macs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 136 MB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (dsc) [2102 B]
Get:2 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (tar) [135 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main macs 2.2.7.1-6 (diff) [1268 kB]
Fetched 136 MB in 2min 57s (771 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/macs-XnkN6Z/macs-2.2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/macs-XnkN6Z' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-2RRTgz/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-2RRTgz/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-2RRTgz/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (3277 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 90 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (42.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
dpkg-deb: building package 'sbuild-build-depends-macs-dummy' in '/<<BUILDDIR>>/resolver-2RRTgz/apt_archive/sbuild-build-depends-macs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-macs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Sources [543 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ Packages [624 B]
Fetched 2500 B in 1s (4073 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install macs build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev binutils
binutils-arm-linux-gnueabihf binutils-common bsdextrautils ca-certificates
cpp-12 cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz
file g++-12 gcc-12 gcc-12-base gettext gettext-base groff-base help2man
intltool-debian libarchive-zip-perl libasan8 libatomic1 libbinutils libblas3
libcc1-0 libctf-nobfd0 libctf0 libdebhelper-perl libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libgcc-12-dev libgcc-s1
libgfortran5 libgomp1 libicu72 libjs-jquery libjs-sphinxdoc libjs-underscore
liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec3
libpipeline1 libproc2-0 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.10-minimal libpython3.10-stdlib libpython3.11 libpython3.11-dev
libpython3.11-minimal libpython3.11-stdlib libssl3 libstdc++-12-dev
libstdc++6 libsub-override-perl libtool libubsan1 libuchardet0 libxml2 m4
man-db media-types openssl po-debconf procps python3 python3-all
python3-all-dev python3-attr python3-dev python3-distutils
python3-exceptiongroup python3-iniconfig python3-lib2to3 python3-minimal
python3-more-itertools python3-numpy python3-packaging python3-pip
python3-pkg-resources python3-pluggy python3-py python3-pytest
python3-setuptools python3-tomli python3-wheel python3.10 python3.10-minimal
python3.11 python3.11-dev python3.11-minimal zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales
cpp-12-doc cython-doc dh-make flit python3-build python3-installer
gcc-12-doc gettext-doc libasprintf-dev libgettextpo-dev groff
libstdc++-12-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
apparmor less www-browser libmail-box-perl python3-doc python3-tk
python3-venv python-attr-doc gfortran subversion python-setuptools-doc
python3.10-venv python3.10-doc binfmt-support python3.11-venv python3.11-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl javascript-common libltdl-dev
libmail-sendmail-perl psmisc python3-pygments
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libblas3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgfortran5 libicu72 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl
libmagic-mgc libmagic1 libmpdec3 libpipeline1 libproc2-0 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib
libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types
openssl po-debconf procps python3 python3-all python3-all-dev python3-attr
python3-dev python3-distutils python3-exceptiongroup python3-iniconfig
python3-lib2to3 python3-minimal python3-more-itertools python3-numpy
python3-packaging python3-pip python3-pkg-resources python3-pluggy
python3-py python3-pytest python3-setuptools python3-tomli python3-wheel
python3.10 python3.10-minimal python3.11 python3.11-dev python3.11-minimal
sbuild-build-depends-macs-dummy zlib1g-dev
The following packages will be upgraded:
binutils binutils-arm-linux-gnueabihf binutils-common cpp-12 g++-12 gcc-12
gcc-12-base libasan8 libatomic1 libbinutils libcc1-0 libctf-nobfd0 libctf0
libgcc-12-dev libgcc-s1 libgomp1 libssl3 libstdc++-12-dev libstdc++6
libubsan1
20 upgraded, 84 newly installed, 0 to remove and 70 not upgraded.
Need to get 91.1 MB of archives.
After this operation, 214 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2RRTgz/apt_archive ./ sbuild-build-depends-macs-dummy 0.invalid.0 [908 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf liblocale-gettext-perl armhf 1.07-5 [14.9 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-14+rpi1 [861 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-14+rpi1 [37.7 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-14+rpi1 [504 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-14+rpi1 [95.4 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-14+rpi1 [8240 B]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-14+rpi1 [2088 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-14+rpi1 [7159 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-14+rpi1 [32.2 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libctf0 armhf 2.39.90.20221231-1+rpi1 [71.5 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libctf-nobfd0 armhf 2.39.90.20221231-1+rpi1 [133 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.39.90.20221231-1+rpi1 [2069 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf libbinutils armhf 2.39.90.20221231-1+rpi1 [407 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf binutils-common armhf 2.39.90.20221231-1+rpi1 [2354 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf binutils armhf 2.39.90.20221231-1+rpi1 [64.9 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-14+rpi1 [7914 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-14+rpi1 [14.2 MB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-14+rpi1 [727 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-14+rpi1 [2027 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-14+rpi1 [36.3 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-2 [1614 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-minimal armhf 3.11.1-2 [796 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf python3.11-minimal armhf 3.11.1-2 [1678 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.11.1-2 [25.7 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-stdlib armhf 3.11.1-2 [1622 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf python3.11 armhf 3.11.1-2 [567 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.11.1-2 [8704 B]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.11.1-2 [25.4 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.9-1 [769 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.9-1 [1477 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.2-1 [1342 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libproc2-0 armhf 2:4.0.2-3 [53.6 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:4.0.2-3 [679 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-2 [1349 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-2 [256 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.32-2+b1 [1507 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1+b1 [571 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf help2man armhf 1.49.3 [198 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-14+rpi1 [238 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 5.3.0-3 [130 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11 armhf 3.11.1-2 [1666 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-dev armhf 3.11.1-2 [3375 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.11.1-2 [8936 B]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf libpython3-all-dev armhf 3.11.1-2 [1068 B]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.9-1 [1597 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.11.1-2 [1064 B]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf python3.11-dev armhf 3.11.1-2 [618 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.11.1-2 [26.2 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.11.1-2 [1064 B]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf python3-attr all 22.2.0-1 [65.4 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf python3-exceptiongroup all 1.1.0-1 [17.4 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf python3-more-itertools all 8.10.0-2 [53.0 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.6.3-1 [278 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.9-1 [509 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf python3-numpy armhf 1:1.24.1-2 [5318 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf python3-packaging all 23.0-1 [32.5 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.6.3-1 [520 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf python3-wheel all 0.38.4-1 [30.8 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf python3-pip all 22.3.1+dfsg-2 [1323 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf python3-pluggy all 1.0.0+repack-1 [19.7 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf python3-py all 1.11.0-1 [89.2 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf python3-tomli all 2.0.1-2 [17.9 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest all 7.2.1-1 [233 kB]
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Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.5.0-1) ...
Setting up libproc2-0:armhf (2:4.0.2-3) ...
Setting up libpython3.10-minimal:armhf (3.10.9-1) ...
Setting up autopoint (0.21-10) ...
Setting up libgfortran5:armhf (12.2.0-14+rpi1) ...
Setting up autoconf (2.71-3) ...
Setting up libubsan1:armhf (12.2.0-14+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-1) ...
Setting up libasan8:armhf (12.2.0-14+rpi1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up procps (2:4.0.2-3) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libbinutils:armhf (2.39.90.20221231-1+rpi1) ...
Setting up openssl (3.0.7-2) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1+b1) ...
Setting up libcc1-0:armhf (12.2.0-14+rpi1) ...
Setting up liblocale-gettext-perl (1.07-5) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up libctf0:armhf (2.39.90.20221231-1+rpi1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up gettext (0.21-10) ...
Setting up libtool (2.4.7-5) ...
Setting up libpython3.11-stdlib:armhf (3.11.1-2) ...
Setting up python3.10-minimal (3.10.9-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up help2man (1.49.3) ...
Setting up libpython3.10-stdlib:armhf (3.10.9-1) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up libgcc-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up libjs-sphinxdoc (5.3.0-3) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-9) ...
Setting up binutils-arm-linux-gnueabihf (2.39.90.20221231-1+rpi1) ...
Setting up libpython3-stdlib:armhf (3.11.1-2) ...
Setting up python3.11 (3.11.1-2) ...
Setting up python3.10 (3.10.9-1) ...
Setting up libpython3.11:armhf (3.11.1-2) ...
Setting up libstdc++-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.11.1-2) ...
Setting up binutils (2.39.90.20221231-1+rpi1) ...
Setting up man-db (2.11.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-packaging (23.0-1) ...
Setting up gcc-12 (12.2.0-14+rpi1) ...
Setting up libpython3.11-dev:armhf (3.11.1-2) ...
Setting up cython3 (0.29.32-2+b1) ...
Setting up python3-pluggy (1.0.0+repack-1) ...
Setting up python3-exceptiongroup (1.1.0-1) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up g++-12 (12.2.0-14+rpi1) ...
Setting up python3-pkg-resources (65.6.3-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up python3-more-itertools (8.10.0-2) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-attr (22.2.0-1) ...
Setting up libpython3-dev:armhf (3.11.1-2) ...
Setting up python3-setuptools (65.6.3-1) ...
Setting up python3-tomli (2.0.1-2) ...
Setting up python3-py (1.11.0-1) ...
Setting up python3.11-dev (3.11.1-2) ...
Setting up python3-pytest (7.2.1-1) ...
Setting up python3-all (3.11.1-2) ...
Setting up debhelper (13.11.4) ...
Setting up python3-wheel (0.38.4-1) ...
Setting up libpython3-all-dev:armhf (3.11.1-2) ...
Setting up python3-dev (3.11.1-2) ...
Setting up python3-pip (22.3.1+dfsg-2) ...
Setting up python3-numpy (1:1.24.1-2) ...
Setting up python3-all-dev (3.11.1-2) ...
Setting up sbuild-build-depends-macs-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39.90.20221231-1+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.90.20221231-1+rpi1 binutils-arm-linux-gnueabihf_2.39.90.20221231-1+rpi1 binutils-common_2.39.90.20221231-1+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-14+rpi1 cython3_0.29.32-2+b1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-1 dirmngr_2.2.40-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.44-3 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 help2man_1.49.3 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libacl1_2.3.1-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39.90.20221231-1+rpi1 libblas3_3.11.0-2 libblkid1_2.38.1-4 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-6+rpi1 libc-dev-bin_2.36-6+rpi1 libc6_2.36-6+rpi1 libc6-dev_2.36-6+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-14+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39.90.20221231-1+rpi1 libctf0_2.39.90.20221231-1+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.4 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-12-dev_12.2.0-14+rpi1 libgcc-s1_12.2.0-14+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-14+rpi1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-14+rpi1 libgpg-error0_1.46-1 libgssapi-krb5-2_1.20.1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1 libisl23_0.25-1 libjansson4_2.14-2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_5.3.0-3 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libksba8_1.6.2-4 liblapack3_3.11.0-2 libldap-2.5-0_2.5.13+dfsg-2+rpi1+b1 liblocale-gettext-perl_1.07-5 liblz4-1_1.9.4-1+rpi1 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-14 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libproc2-0_2:4.0.2-3 libpython3-all-dev_3.11.1-2 libpython3-dev_3.11.1-2 libpython3-stdlib_3.11.1-2 libpython3.10-minimal_3.10.9-1 libpython3.10-stdlib_3.10.9-1 libpython3.11_3.11.1-2 libpython3.11-dev_3.11.1-2 libpython3.11-minimal_3.11.1-2 libpython3.11-stdlib_3.11.1-2 libreadline8_8.2-1.2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsmartcols1_2.38.1-4 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-2 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 libsub-override-perl_0.09-4 libsystemd0_252.2-1+rpi1 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libubsan1_12.2.0-14+rpi1 libuchardet0_0.0.7-1 libudev1_252.2-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libxml2_2.9.14+dfsg-1.1+b1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.12-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-2 make_4.3-4.1 man-db_2.11.2-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 openssl_3.0.7-2 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.36_5.36.0-6 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 procps_2:4.0.2-3 python3_3.11.1-2 python3-all_3.11.1-2 python3-all-dev_3.11.1-2 python3-attr_22.2.0-1 python3-dev_3.11.1-2 python3-distutils_3.10.8-1 python3-exceptiongroup_1.1.0-1 python3-iniconfig_1.1.1-2 python3-lib2to3_3.10.8-1 python3-minimal_3.11.1-2 python3-more-itertools_8.10.0-2 python3-numpy_1:1.24.1-2 python3-packaging_23.0-1 python3-pip_22.3.1+dfsg-2 python3-pkg-resources_65.6.3-1 python3-pluggy_1.0.0+repack-1 python3-py_1.11.0-1 python3-pytest_7.2.1-1 python3-setuptools_65.6.3-1 python3-tomli_2.0.1-2 python3-wheel_0.38.4-1 python3.10_3.10.9-1 python3.10-minimal_3.10.9-1 python3.11_3.11.1-2 python3.11-dev_3.11.1-2 python3.11-minimal_3.11.1-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-macs-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-7 tar_1.34+dfsg-1 tzdata_2022f-1 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.9UCrkJ5z/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 24 11:32:00 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./macs_2.2.7.1-6.dsc
dpkg-source: info: extracting macs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking macs_2.2.7.1.orig.tar.gz
dpkg-source: info: unpacking macs_2.2.7.1-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling
dpkg-source: info: applying keep_debug
dpkg-source: info: applying link-libm.patch
dpkg-source: info: applying no-pip.patch
dpkg-source: info: applying enable_python3.10.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.2.7.1-6+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-0e5fd62c-6a8e-4705-b028-b91269c2bd8b
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package macs
dpkg-buildpackage: info: source version 2.2.7.1-6+b1
dpkg-buildpackage: info: source distribution bookworm-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:240: python3.11 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
rm -Rf test/macs2.2.7.1-6+b1* test/speedtest*
rm -f debian/*.1 debian/*-man-include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:240: python3.11 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for pyx in $(find MACS2/ -name "*.pyx"); do \
rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done
dh_auto_build
I: pybuild base:240: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/Constants.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO
copying MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO
copying MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
copying MACS2/khash.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2
running build_ext
cythoning MACS2/Prob.pyx to MACS2/Prob.c
cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c
cythoning MACS2/Pileup.pyx to MACS2/Pileup.c
cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c
cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c
cythoning MACS2/Signal.pyx to MACS2/Signal.c
cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c
cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c
cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c
cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c
cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c
cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c
cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c
building 'MACS2.Prob' extension
creating build
creating build/temp.linux-armhf-cpython-311
creating build/temp.linux-armhf-cpython-311/MACS2
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/Prob.c -o build/temp.linux-armhf-cpython-311/MACS2/Prob.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/Prob.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Prob.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.Parser' extension
creating build/temp.linux-armhf-cpython-311/MACS2/IO
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/IO/Parser.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/Parser.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/Parser.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/Parser.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.Pileup' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/Pileup.c -o build/temp.linux-armhf-cpython-311/MACS2/Pileup.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/cPosValCalculation.c -o build/temp.linux-armhf-cpython-311/MACS2/cPosValCalculation.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/Pileup.o build/temp.linux-armhf-cpython-311/MACS2/cPosValCalculation.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Pileup.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.PeakModel' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/PeakModel.c -o build/temp.linux-armhf-cpython-311/MACS2/PeakModel.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/PeakModel.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/PeakModel.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.PeakDetect' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS2/PeakDetect.c -o build/temp.linux-armhf-cpython-311/MACS2/PeakDetect.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/PeakDetect.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/PeakDetect.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.Signal' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/Signal.c -o build/temp.linux-armhf-cpython-311/MACS2/Signal.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/Signal.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Signal.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.PeakIO' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS2/IO/PeakIO.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/PeakIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/PeakIO.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/PeakIO.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraphIO' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/BedGraphIO.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/BedGraphIO.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.FixWidthTrack' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/FixWidthTrack.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/FixWidthTrack.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.PairedEndTrack' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/PairedEndTrack.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/PairedEndTrack.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraph' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS2/IO/BedGraph.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/BedGraph.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/BedGraph.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/BedGraph.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.ScoreTrack' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/ScoreTrack.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/ScoreTrack.cpython-311-arm-linux-gnueabihf.so
building 'MACS2.IO.CallPeakUnit' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-armhf-cpython-311/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/MACS2/IO/CallPeakUnit.o -L/usr/lib/arm-linux-gnueabihf -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/CallPeakUnit.cpython-311-arm-linux-gnueabihf.so
running build_scripts
creating build/scripts-3.11
copying and adjusting bin/macs2 -> build/scripts-3.11
changing mode of build/scripts-3.11/macs2 from 644 to 755
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info \
--name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs2" > debian/macs2.1
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \
"[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \
> debian/macs2_${subcommand}-man-include; done
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info --version-string="2.2.7.1" \
--include debian/macs2_${subcommand}-man-include \
"python3 bin/macs2 ${subcommand}" > \
debian/macs2_${subcommand}.1; done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test
I: pybuild base:240: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build; python3.11 -m pytest test
============================= test session starts ==============================
platform linux -- Python 3.11.1, pytest-7.2.1, pluggy-1.0.0+repack
rootdir: /<<PKGBUILDDIR>>
collected 42 items
test/test_BedGraph.py .... [ 9%]
test/test_FixWidthTrack.py .... [ 19%]
test/test_PairedEndTrack.py .... [ 28%]
test/test_Parser.py ... [ 35%]
test/test_PeakIO.py ... [ 42%]
test/test_Pileup.py .. [ 47%]
test/test_Prob.py ................ [ 85%]
test/test_ScoreTrack.py .... [ 95%]
test/test_Signal.py s. [100%]
======================== 41 passed, 1 skipped in 1.73s =========================
cd test && for PY3VER in 3.11; do \
export PATH=/<<PKGBUILDDIR>>/build/scripts-${PY3VER}:$PATH \
&& export PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_${PY3VER}_MACS2/build \
&& ./cmdlinetest macs2.2.7.1-6+b1-${PY3VER} ; done
1. callpeak
1.1 callpeak narrow
1.2 callpeak broad
1.3 callpeak on PE narrow/broad
2. pileup
3. filterdup
4. predictd
5. randsample
6. refinepeak
7. bdgcmp
8. bdgpeakcall
9. bdgbroadcall
10. bdgdiff
11. cmbreps
12. bdgopt
13. 50k contigs with buffersize
13.1 callpeak
13.2 filterdup
13.3 pileup
13.4 randsample
14. search for errors or warnings in log files
checking macs2.2.7.1-6+b1-3.11_run_50kcontigs/run_callpeak_50kcontigs.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_50kcontigs/run_filterdup_50kcontigs.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_50kcontigs/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_50kcontigs/run_randsample.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgcmp/run_bdgcmp.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgdiff/run_bdgdiff_w_o_file.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgdiff/run_bdgdiff_w_prefix.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgopt/run_bdgopt_max.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgopt/run_bdgopt_min.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgpeakcall/run_bdgpeakcall_cutoff.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_broad/run_callpeak_broad.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow0.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow1.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow2.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow3.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow4.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow/run_callpeak_narrow5.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_pe_broad/run_callpeak_bampe_broad.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_cmbreps/run_cmbreps_fisher.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_cmbreps/run_cmbreps_max.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_cmbreps/run_cmbreps_mean.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_filterdup/run_filterdup.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_filterdup/run_filterdup_d.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_filterdup/run_filterdup_pe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_filterdup/run_filterdup_pe_d.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_CTRL.bed.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_CTRLPE.bampe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_CTRLPE.bedpe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_ChIPPE.bampe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_pileup/run_pileup_ChIPPE.bedpe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_predictd/run_predictd.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_randsample/run_randsample.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_randsample/run_randsample_bampe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_randsample/run_randsample_bedpe.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_refinepeak/run_refinepeak_w_ofile.log...
... clear!
checking macs2.2.7.1-6+b1-3.11_run_refinepeak/run_refinepeak_w_prefix.log...
... clear!
15. compare with standard outputs
14.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ...
... success!
14.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ...
... success!
14.1.3 checking 50kcontigs run_filterdup_result.bed ...
... success!
14.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ...
... success!
14.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ...
... success!
14.3.1 checking bdgcmp run_bdgcmp_FE.bdg ...
... success!
14.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ...
... success!
14.4.1 checking bdgdiff common.bed ...
... success!
14.4.2 checking bdgdiff cond1.bed ...
... success!
14.4.3 checking bdgdiff cond2.bed ...
... success!
14.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ...
... success!
14.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ...
... success!
14.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ...
... success!
14.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ...
... success!
14.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ...
... success!
14.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ...
... success!
14.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ...
... success!
14.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ...
... success!
14.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ...
... success!
14.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ...
... success!
14.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ...
... success!
14.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ...
... success!
14.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ...
... success!
14.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ...
... success!
14.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ...
... success!
14.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ...
... success!
14.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ...
... success!
14.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ...
... success!
14.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ...
... success!
14.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ...
... success!
14.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ...
... success!
14.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ...
... success!
14.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ...
... success!
14.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ...
... success!
14.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ...
... success!
14.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ...
... success!
14.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ...
... success!
14.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ...
... success!
14.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ...
... success!
14.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ...
... success!
14.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ...
... success!
14.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ...
... success!
14.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ...
... success!
14.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ...
... success!
14.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ...
... success!
14.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ...
... success!
14.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ...
... success!
14.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ...
... success!
14.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ...
... success!
14.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ...
... success!
14.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ...
... success!
14.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ...
... success!
14.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ...
... success!
14.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ...
... success!
14.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ...
... success!
14.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ...
... success!
14.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ...
... success!
14.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ...
... success!
14.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ...
... success!
14.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ...
... success!
14.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ...
... success!
14.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ...
... success!
14.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ...
... success!
14.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ...
... success!
14.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ...
... success!
14.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ...
... success!
14.11.1 checking cmbreps run_cmbreps_fisher.bdg ...
... success!
14.11.2 checking cmbreps run_cmbreps_max.bdg ...
... success!
14.11.3 checking cmbreps run_cmbreps_mean.bdg ...
... success!
14.12.1 checking filterdup run_filterdup_result.bed ...
... success!
14.12.2 checking filterdup run_filterdup_result_pe.bedpe ...
... success!
14.13.1 checking pileup run_pileup_CTRL.bed.bdg ...
... success!
14.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ...
... success!
14.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ...
... success!
14.13.4 checking pileup run_pileup_ChIP.bed.bdg ...
... success!
14.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ...
... success!
14.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ...
... success!
14.14.1 checking refinepeak run_refinepeak_w_ofile.bed ...
... success!
14.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ...
... success!
14.15.1 checking bdgopt run_bdgopt_max.bdg ...
... success!
14.15.2 checking bdgopt run_bdgopt_min.bdg ...
... success!
16. brief speed test
CPU time (mm:ss): 00:04:12
Max mem (KB): 166432
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install --destdir=debian/macs/ -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/macs
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running build_ext
skipping 'MACS2/Prob.c' Cython extension (up-to-date)
skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date)
skipping 'MACS2/Pileup.c' Cython extension (up-to-date)
skipping 'MACS2/PeakModel.c' Cython extension (up-to-date)
skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date)
skipping 'MACS2/Signal.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date)
skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date)
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/macs/usr
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Constants.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/Parser.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/PeakIO.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/BedGraphIO.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/FixWidthTrack.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/PairedEndTrack.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/BedGraph.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/ScoreTrack.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/CallPeakUnit.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/IO/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/khash.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Prob.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Pileup.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/PeakModel.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/PeakDetect.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/Signal.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/Constants.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/callpeak_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/OptValidator.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/OutputWriter.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/pileup_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/filterdup_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/predictd_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/randsample_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/refinepeak_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/bdgcmp_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/bdgpeakcall_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/bdgbroadcall_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/bdgdiff_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/cmbreps_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_MACS2/build/MACS2/__pycache__/bdgopt_cmd.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__pycache__
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/Constants.py to Constants.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/OptValidator.py to OptValidator.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/OutputWriter.py to OutputWriter.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2/IO/__init__.py to __init__.cpython-311.pyc
running install_egg_info
running egg_info
creating MACS2.egg-info
writing MACS2.egg-info/PKG-INFO
writing dependency_links to MACS2.egg-info/dependency_links.txt
writing requirements to MACS2.egg-info/requires.txt
writing top-level names to MACS2.egg-info/top_level.txt
writing manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching '.gitignore'
warning: no previously-included files found matching '.travis.yml'
no previously-included directories found matching '.github'
no previously-included directories found matching 'DOCKER'
adding license file 'LICENSE'
writing manifest file 'MACS2.egg-info/SOURCES.txt'
Copying MACS2.egg-info to /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.11/dist-packages/MACS2-2.2.7.1.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/macs/usr/bin
copying build/scripts-3.11/macs2 -> /<<PKGBUILDDIR>>/debian/macs/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/macs/usr/bin/macs2 to 755
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installexamples -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_lintian -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dwz: debian/macs/usr/lib/python3/dist-packages/MACS2/IO/PeakIO.cpython-311-arm-linux-gnueabihf.so: DWARF compression not beneficial - old size 707600 new size 709676
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_2.2.7.1-6+b1_armhf.deb'.
dpkg-deb: building package 'macs' in '../macs_2.2.7.1-6+b1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../macs_2.2.7.1-6+b1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../macs_2.2.7.1-6+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-02-01T07:13:29Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
macs_2.2.7.1-6+b1_armhf.changes:
--------------------------------
Format: 1.8
Date: Thu, 24 Nov 2022 12:18:59 +0100
Source: macs (2.2.7.1-6)
Binary: macs macs-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 2.2.7.1-6+b1
Distribution: bookworm-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
macs - Model-based Analysis of ChIP-Seq on short reads sequencers
Changes:
macs (2.2.7.1-6+b1) bookworm-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
macs-dbgsym_2.2.7.1-6+b1_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 7325328 bytes: control archive=1200 bytes.
873 bytes, 12 lines control
1462 bytes, 14 lines md5sums
Package: macs-dbgsym
Source: macs (2.2.7.1-6)
Version: 2.2.7.1-6+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 7587
Depends: macs (= 2.2.7.1-6+b1)
Section: debug
Priority: optional
Description: debug symbols for macs
Build-Ids: 281fe1eeffc2d929d1ab78bd55800ab5571ff9d1 36e7dc5f56945d68fd9e4a1aa3a21b482d023588 414f98e7ac7894323b167d2fff62bde2b1625359 55b89291c47a9e79b8f8f40d2e96e1bb309ce244 57c6ea0e03e68d2608ccf42c8fc359b6396680ce 70a38c2d24f3b634c7d4b5180f073c055ecda213 8fa10e3cf6ac45733897029872d59b5d425eee39 9886d5bedc6146c74c971306e8dcafb490cc326b a6a95cbb2737771d28cc26685e040e1398603932 b0e4d95232da6a3bef42043b5aa455a140a15d89 cbc6cf1461634b25dd0aa9218cf7007ff4d106da ec4a49efe0bfd01d9ec8658ddfeeeb5ff7eca543 ee62bdaf625e5e470ef08130365ee37f0a6aacdd
drwxr-xr-x root/root 0 2022-11-24 11:18 ./
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drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 26824 2022-11-24 11:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/macs.debug
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-11-24 11:18 ./usr/share/doc/macs-dbgsym -> macs
macs_2.2.7.1-6+b1_armhf.deb
---------------------------
new Debian package, version 2.0.
size 2337588 bytes: control archive=2932 bytes.
985 bytes, 19 lines control
5334 bytes, 61 lines md5sums
255 bytes, 12 lines * postinst #!/bin/sh
368 bytes, 12 lines * prerm #!/bin/sh
Package: macs
Source: macs (2.2.7.1-6)
Version: 2.2.7.1-6+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 5570
Depends: python3 (<< 3.12), python3 (>= 3.11~), python3-numpy, python3:any, libc6 (>= 2.29)
Section: science
Priority: optional
Homepage: https://github.com/taoliu/MACS/
Description: Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
drwxr-xr-x root/root 0 2022-11-24 11:18 ./
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/bin/
-rwxr-xr-x root/root 67796 2022-11-24 11:18 ./usr/bin/macs2
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/
-rw-r--r-- root/root 25704 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/dependency_links.txt
-rw-r--r-- root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/requires.txt
-rw-r--r-- root/root 6 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/top_level.txt
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/
-rw-r--r-- root/root 845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/Constants.py
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/
-rw-r--r-- root/root 406852 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraph.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 135060 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraphIO.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 403404 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/CallPeakUnit.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 337328 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/FixWidthTrack.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 270400 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/PairedEndTrack.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 470952 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/Parser.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 551192 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/PeakIO.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 607040 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/IO/ScoreTrack.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 0 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/IO/__init__.py
-rw-r--r-- root/root 28454 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OptValidator.py
-rw-r--r-- root/root 10842 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OutputWriter.py
-rw-r--r-- root/root 137456 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/PeakDetect.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 269324 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/PeakModel.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 268048 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Pileup.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 136184 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Prob.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 138392 2022-11-24 11:18 ./usr/lib/python3/dist-packages/MACS2/Signal.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 24 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/__init__.py
-rw-r--r-- root/root 2141 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgbroadcall_cmd.py
-rw-r--r-- root/root 3712 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgcmp_cmd.py
-rw-r--r-- root/root 4318 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgdiff_cmd.py
-rw-r--r-- root/root 2388 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgopt_cmd.py
-rw-r--r-- root/root 2696 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgpeakcall_cmd.py
-rw-r--r-- root/root 1157 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cPosValCalculation.pxd
-rw-r--r-- root/root 19674 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/callpeak_cmd.py
-rw-r--r-- root/root 1944 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cmbreps_cmd.py
-rw-r--r-- root/root 9715 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/diffpeak_cmd.py
-rw-r--r-- root/root 4583 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/filterdup_cmd.py
-rw-r--r-- root/root 3199 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/khash.pxd
-rw-r--r-- root/root 3964 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/pileup_cmd.py
-rw-r--r-- root/root 3178 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/predictd_cmd.py
-rw-r--r-- root/root 3888 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/randsample_cmd.py
-rw-r--r-- root/root 6845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/refinepeak_cmd.py
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/doc/macs/
-rw-r--r-- root/root 9676 2020-04-12 00:00 ./usr/share/doc/macs/README.md.gz
-rw-r--r-- root/root 671 2022-11-24 11:18 ./usr/share/doc/macs/README.test
-rw-r--r-- root/root 222 2022-11-24 11:18 ./usr/share/doc/macs/changelog.Debian.armhf.gz
-rw-r--r-- root/root 1134 2022-11-24 11:18 ./usr/share/doc/macs/changelog.Debian.gz
-rw-r--r-- root/root 17984 2020-04-12 00:00 ./usr/share/doc/macs/changelog.gz
-rw-r--r-- root/root 3361 2022-11-24 11:18 ./usr/share/doc/macs/copyright
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/doc/macs/examples/
-rw-r--r-- root/root 129766 2022-11-24 11:18 ./usr/share/doc/macs/examples/aluY.chr1.bed.gz
-rw-r--r-- root/root 1128077 2022-11-24 11:18 ./usr/share/doc/macs/examples/gerp.chr1.bed.gz
-rw-r--r-- root/root 427 2022-11-24 11:18 ./usr/share/doc/macs/run-unit-test
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/lintian/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 107 2022-11-24 11:18 ./usr/share/lintian/overrides/macs
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/man/
drwxr-xr-x root/root 0 2022-11-24 11:18 ./usr/share/man/man1/
-rw-r--r-- root/root 1123 2022-11-24 11:18 ./usr/share/man/man1/macs2.1.gz
-rw-r--r-- root/root 929 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgbroadcall.1.gz
-rw-r--r-- root/root 1396 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgcmp.1.gz
-rw-r--r-- root/root 1193 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgdiff.1.gz
-rw-r--r-- root/root 903 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgopt.1.gz
-rw-r--r-- root/root 915 2022-11-24 11:18 ./usr/share/man/man1/macs2_bdgpeakcall.1.gz
-rw-r--r-- root/root 5692 2022-11-24 11:18 ./usr/share/man/man1/macs2_callpeak.1.gz
-rw-r--r-- root/root 775 2022-11-24 11:18 ./usr/share/man/man1/macs2_cmbreps.1.gz
-rw-r--r-- root/root 1947 2022-11-24 11:18 ./usr/share/man/man1/macs2_filterdup.1.gz
-rw-r--r-- root/root 1756 2022-11-24 11:18 ./usr/share/man/man1/macs2_pileup.1.gz
-rw-r--r-- root/root 1663 2022-11-24 11:18 ./usr/share/man/man1/macs2_predictd.1.gz
-rw-r--r-- root/root 1546 2022-11-24 11:18 ./usr/share/man/man1/macs2_randsample.1.gz
-rw-r--r-- root/root 1335 2022-11-24 11:18 ./usr/share/man/man1/macs2_refinepeak.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 1434480
Build-Time: 1452
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 543
Job: macs_2.2.7.1-6
Machine Architecture: armhf
Package: macs
Package-Time: 2222
Source-Version: 2.2.7.1-6
Space: 1434480
Status: successful
Version: 2.2.7.1-6+b1
--------------------------------------------------------------------------------
Finished at 2023-02-01T07:13:29Z
Build needed 00:37:02, 1434480k disk space