macs →
2.2.7.1-3+b1 →
armhf → 2020-12-09 11:14:41
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| macs 2.2.7.1-3+b1 (armhf) Wed, 09 Dec 2020 10:46:23 +0000 |
+==============================================================================+
Package: macs
Version: 2.2.7.1-3+b1
Source Version: 2.2.7.1-3
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-3a28eb02-53d3-4f48-9770-5a42b1e74469' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.9 MB in 9s (2807 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'macs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/macs.git
Please use:
git clone https://salsa.debian.org/med-team/macs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 136 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main macs 2.2.7.1-3 (dsc) [2102 B]
Get:2 http://172.17.0.1/private bullseye-staging/main macs 2.2.7.1-3 (tar) [135 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main macs 2.2.7.1-3 (diff) [1268 kB]
Fetched 136 MB in 23s (5947 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/macs-Qjtdi5/macs-2.2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/macs-Qjtdi5' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-7RW1v8/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-7RW1v8/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-7RW1v8/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (9293 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 59 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (63.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12594 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps
dpkg-deb: building package 'sbuild-build-depends-macs-dummy' in '/<<BUILDDIR>>/resolver-7RW1v8/apt_archive/sbuild-build-depends-macs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-macs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Sources [543 B]
Get:5 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ Packages [625 B]
Fetched 2501 B in 0s (10.8 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install macs build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libisl22 libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates cpp-10 cython3
debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file g++-10
gcc-10 gcc-10-base gettext gettext-base groff-base help2man intltool-debian
libarchive-zip-perl libasan6 libatomic1 libblas3 libcc1-0 libcroco3
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgcc-10-dev libgcc-s1 libgfortran5
libglib2.0-0 libgomp1 libgssapi-krb5-2 libicu67 libisl23 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblocale-gettext-perl
libmagic-mgc libmagic1 libncurses6 libncursesw6 libnsl2 libpipeline1
libprocps8 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.9
libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libsigsegv2
libssl1.1 libstdc++-10-dev libstdc++6 libsub-override-perl libtinfo6
libtirpc-common libtirpc3 libtool libubsan1 libuchardet0 libxml2 m4 mailcap
man-db media-types mime-support openssl po-debconf procps python-pip-whl
python3 python3-all python3-all-dev python3-atomicwrites python3-attr
python3-dev python3-distutils python3-importlib-metadata python3-lib2to3
python3-minimal python3-more-itertools python3-numpy python3-packaging
python3-pip python3-pkg-resources python3-pluggy python3-py
python3-pyparsing python3-pytest python3-setuptools python3-six
python3-wcwidth python3-wheel python3-zipp python3.9 python3.9-dev
python3.9-minimal zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc gcc-10-locales cython-doc
dh-make gcc-10-doc gettext-doc libasprintf-dev libgettextpo-dev groff
krb5-doc krb5-user libstdc++-10-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc
gfortran python-numpy-doc python3-numpy-dbg subversion python-pyparsing-doc
python-setuptools-doc python3.9-venv python3.9-doc binfmt-support
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales libgpm2 libltdl-dev libmail-sendmail-perl psmisc
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev ca-certificates cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libblas3 libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libgssapi-krb5-2
libicu67 libisl23 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnsl2
libpipeline1 libprocps8 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib
libsigsegv2 libssl1.1 libsub-override-perl libtirpc-common libtirpc3 libtool
libuchardet0 libxml2 m4 mailcap man-db media-types mime-support openssl
po-debconf procps python-pip-whl python3 python3-all python3-all-dev
python3-atomicwrites python3-attr python3-dev python3-distutils
python3-importlib-metadata python3-lib2to3 python3-minimal
python3-more-itertools python3-numpy python3-packaging python3-pip
python3-pkg-resources python3-pluggy python3-py python3-pyparsing
python3-pytest python3-setuptools python3-six python3-wcwidth python3-wheel
python3-zipp python3.9 python3.9-dev python3.9-minimal
sbuild-build-depends-macs-dummy zlib1g-dev
The following packages will be upgraded:
cpp-10 g++-10 gcc-10 gcc-10-base libasan6 libatomic1 libcc1-0 libgcc-10-dev
libgcc-s1 libgomp1 libncursesw6 libstdc++-10-dev libstdc++6 libtinfo6
libubsan1
15 upgraded, 95 newly installed, 0 to remove and 44 not upgraded.
Need to get 171 MB of archives.
After this operation, 87.7 MB disk space will be freed.
Get:1 copy:/<<BUILDDIR>>/resolver-7RW1v8/apt_archive ./ sbuild-build-depends-macs-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf liblocale-gettext-perl armhf 1.07-4+b1 [18.3 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libisl23 armhf 0.23-1 [497 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.2.0-19+rpi1 [38.4 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.2.0-19+rpi1 [200 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.2.0-19+rpi1 [36.2 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.2.0-19+rpi1 [83.7 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.2.0-19+rpi1 [8180 B]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libasan6 armhf 10.2.0-19+rpi1 [300 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.2.0-19+rpi1 [115 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf g++-10 armhf 10.2.0-19+rpi1 [41.4 MB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-10-dev armhf 10.2.0-19+rpi1 [1751 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libgcc-10-dev armhf 10.2.0-19+rpi1 [682 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf gcc-10 armhf 10.2.0-19+rpi1 [44.4 MB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf cpp-10 armhf 10.2.0-19+rpi1 [38.5 MB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.2.0-19+rpi1 [409 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1h-1 [1271 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.1~rc1-2+rpi1 [789 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.1~rc1-2+rpi1 [1624 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.0-4 [37.8 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf media-types all 1.0.1 [18.2 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf mailcap all 3.67 [31.3 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libtinfo6 armhf 6.2+20201114-1 [328 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libncursesw6 armhf 6.2+20201114-1 [105 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.18.3-4 [62.3 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.18.3-4 [108 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.18.3-4 [315 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.18.3-4 [142 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libtirpc-common all 1.2.6-3 [13.3 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libtirpc3 armhf 1.2.6-3 [71.2 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libnsl2 armhf 1.3.0-2 [33.2 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.1~rc1-2+rpi1 [1653 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.1~rc1-2+rpi1 [460 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.0-4 [21.0 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.0-4 [64.1 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20201114-1 [79.5 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1h-1 [812 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf cython3 armhf 0.29.21-3+b1 [1234 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.6-1 [78.4 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.6-1 [145 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102 [99.3 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf help2man armhf 1.47.16 [181 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.10-1 [121 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-19+rpi1 [231 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9 armhf 3.9.1~rc1-2+rpi1 [1412 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-dev armhf 3.9.1~rc1-2+rpi1 [3057 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.9.0-4 [21.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.9.0-4 [1068 B]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf python-pip-whl all 20.1.1-2 [1887 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.9.0-4 [1056 B]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf python3.9-dev armhf 3.9.1~rc1-2+rpi1 [501 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.9.0-4 [1164 B]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.9.0-4 [1060 B]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf python3-atomicwrites all 1.4.0-1 [10.2 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf python3-attr all 20.3.0-1 [52.9 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.15.0-2 [16.9 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf python3-more-itertools all 4.2.0-3 [42.7 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf python3-zipp all 1.0.0-3 [6060 B]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf python3-importlib-metadata all 1.6.0-2 [10.3 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 50.3.0-1 [187 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.19.4-1+b2 [2930 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.4-1 [30.4 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 50.3.0-1 [511 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python3-wheel all 0.34.2-1 [24.0 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf python3-pip all 20.1.1-2 [295 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf python3-pluggy all 0.13.0-5 [22.1 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf python3-py all 1.9.0-2 [94.1 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf python3-wcwidth all 0.1.9+dfsg1-2 [18.2 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf python3-pytest all 4.6.11-1 [268 kB]
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Selecting previously unselected package python3-pluggy.
Preparing to unpack .../65-python3-pluggy_0.13.0-5_all.deb ...
Unpacking python3-pluggy (0.13.0-5) ...
Selecting previously unselected package python3-py.
Preparing to unpack .../66-python3-py_1.9.0-2_all.deb ...
Unpacking python3-py (1.9.0-2) ...
Selecting previously unselected package python3-wcwidth.
Preparing to unpack .../67-python3-wcwidth_0.1.9+dfsg1-2_all.deb ...
Unpacking python3-wcwidth (0.1.9+dfsg1-2) ...
Selecting previously unselected package python3-pytest.
Preparing to unpack .../68-python3-pytest_4.6.11-1_all.deb ...
Unpacking python3-pytest (4.6.11-1) ...
Selecting previously unselected package sbuild-build-depends-macs-dummy.
Preparing to unpack .../69-sbuild-build-depends-macs-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-macs-dummy (0.invalid.0) ...
Setting up media-types (1.0.1) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libicu67:armhf (67.1-4) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.3-2) ...
No schema files found: doing nothing.
Setting up libtirpc-common (1.2.6-3) ...
Setting up libdebhelper-perl (13.2.1) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up libgomp1:armhf (10.2.0-19+rpi1) ...
Setting up libasan6:armhf (10.2.0-19+rpi1) ...
Setting up libkrb5support0:armhf (1.18.3-4) ...
Setting up autotools-dev (20180224.1) ...
Setting up libblas3:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.2.10-1) ...
Setting up libncurses6:armhf (6.2+20201114-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libatomic1:armhf (10.2.0-19+rpi1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libk5crypto3:armhf (1.18.3-4) ...
Setting up libgfortran5:armhf (10.2.0-19+rpi1) ...
Setting up libubsan1:armhf (10.2.0-19+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libkrb5-3:armhf (1.18.3-4) ...
Setting up libisl23:armhf (0.23-1) ...
Setting up openssl (1.1.1h-1) ...
Setting up mailcap (3.67) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up libcc1-0:armhf (10.2.0-19+rpi1) ...
Setting up liblocale-gettext-perl (1.07-4+b1) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up cpp-10 (10.2.0-19+rpi1) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up liblapack3:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up mime-support (3.66) ...
Setting up libtool (2.4.6-14) ...
Setting up libgcc-10-dev:armhf (10.2.0-19+rpi1) ...
Setting up m4 (1.4.18-4) ...
Setting up help2man (1.47.16) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libgssapi-krb5-2:armhf (1.18.3-4) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up gcc-10 (10.2.0-19+rpi1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up python-pip-whl (20.1.1-2) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libtirpc3:armhf (1.2.6-3) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libstdc++-10-dev:armhf (10.2.0-19+rpi1) ...
Setting up g++-10 (10.2.0-19+rpi1) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libnsl2:armhf (1.3.0-2) ...
Setting up libpython3.9-stdlib:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.0-4) ...
Setting up po-debconf (1.0.21) ...
Setting up libpython3.9:armhf (3.9.1~rc1-2+rpi1) ...
Setting up python3.9 (3.9.1~rc1-2+rpi1) ...
Setting up libpython3.9-dev:armhf (3.9.1~rc1-2+rpi1) ...
Setting up python3 (3.9.0-4) ...
Setting up python3-wheel (0.34.2-1) ...
Setting up python3-atomicwrites (1.4.0-1) ...
Setting up python3-six (1.15.0-2) ...
Setting up python3-wcwidth (0.1.9+dfsg1-2) ...
Setting up python3-pyparsing (2.4.7-1) ...
Setting up cython3 (0.29.21-3+b1) ...
Setting up python3.9-dev (3.9.1~rc1-2+rpi1) ...
Setting up python3-lib2to3 (3.8.6-1) ...
Setting up python3-pkg-resources (50.3.0-1) ...
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up python3-more-itertools (4.2.0-3) ...
Setting up python3-attr (20.3.0-1) ...
Setting up libpython3-dev:armhf (3.9.0-4) ...
Setting up python3-setuptools (50.3.0-1) ...
Setting up python3-py (1.9.0-2) ...
Setting up python3-all (3.9.0-4) ...
Setting up python3-zipp (1.0.0-3) ...
Setting up python3-packaging (20.4-1) ...
Setting up libpython3-all-dev:armhf (3.9.0-4) ...
Setting up python3-dev (3.9.0-4) ...
Setting up python3-pip (20.1.1-2) ...
Setting up python3-numpy (1:1.19.4-1+b2) ...
Setting up python3-all-dev (3.9.0-4) ...
Setting up python3-importlib-metadata (1.6.0-2) ...
Setting up python3-pluggy (0.13.0-5) ...
Setting up python3-pytest (4.6.11-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2.1) ...
Setting up sbuild-build-depends-macs-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-19+rpi1 gcc-10_10.2.0-19+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.11 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-19+rpi1 cython3_0.29.21-3+b1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-19+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-19+rpi1 gcc-10-base_10.2.0-19+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 libacl1_2.2.53-8 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan6_10.2.0-19+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-19+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2+rpi1 libblas3_3.9.0-3 libblkid1_2.36-3 libboost-iostreams1.71.0_1.71.0-7 libbz2-1.0_1.0.8-4 libc-bin_2.31-4+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcap-ng0_0.7.9-2.2 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-19+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2+rpi1 libctf0_2.35.1-2+rpi1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libexpat1_2.2.10-1 libexpat1-dev_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-19+rpi1 libgcc-s1_10.2.0-19+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-19+rpi1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-19+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-3 libisl22_0.22.1-1 libisl23_0.23-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.4.0-2 liblapack3_3.9.0-3 libldap-2.4-2_2.4.56+dfsg-1 libldap-common_2.4.56+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl2_1.3.0-2 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpython3-all-dev_3.9.0-4 libpython3-dev_3.9.0-4 libpython3-stdlib_3.9.0-4 libpython3.9_3.9.1~rc1-2+rpi1 libpython3.9-dev_3.9.1~rc1-2+rpi1 libpython3.9-minimal_3.9.1~rc1-2+rpi1 libpython3.9-stdlib_3.9.1~rc1-2+rpi1 libreadline8_8.1~rc2-2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-2+rpi1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-19+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-2+rpi1 libunistring2_0.9.10-4 libuuid1_2.36-3 libxapian30_1.4.17-1 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 mailcap_3.67 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1 mime-support_3.66 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 netbase_6.2 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 procps_2:3.3.16-5 python-pip-whl_20.1.1-2 python3_3.9.0-4 python3-all_3.9.0-4 python3-all-dev_3.9.0-4 python3-atomicwrites_1.4.0-1 python3-attr_20.3.0-1 python3-dev_3.9.0-4 python3-distutils_3.8.6-1 python3-importlib-metadata_1.6.0-2 python3-lib2to3_3.8.6-1 python3-minimal_3.9.0-4 python3-more-itertools_4.2.0-3 python3-numpy_1:1.19.4-1+b2 python3-packaging_20.4-1 python3-pip_20.1.1-2 python3-pkg-resources_50.3.0-1 python3-pluggy_0.13.0-5 python3-py_1.9.0-2 python3-pyparsing_2.4.7-1 python3-pytest_4.6.11-1 python3-setuptools_50.3.0-1 python3-six_1.15.0-2 python3-wcwidth_0.1.9+dfsg1-2 python3-wheel_0.34.2-1 python3-zipp_1.0.0-3 python3.9_3.9.1~rc1-2+rpi1 python3.9-dev_3.9.1~rc1-2+rpi1 python3.9-minimal_3.9.1~rc1-2+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc2-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-macs-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 util-linux_2.36-3 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.RSTLNYfQ/trustedkeys.kbx': General error
gpgv: Signature made Wed Jul 15 21:48:48 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./macs_2.2.7.1-3.dsc
dpkg-source: info: extracting macs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking macs_2.2.7.1.orig.tar.gz
dpkg-source: info: unpacking macs_2.2.7.1-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling
dpkg-source: info: applying keep_debug
dpkg-source: info: applying link-libm.patch
dpkg-source: info: applying no-pip.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.2.7.1-3+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-3a28eb02-53d3-4f48-9770-5a42b1e74469
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package macs
dpkg-buildpackage: info: source version 2.2.7.1-3+b1
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || true
I: pybuild base:232: python3.9 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
rm -Rf test/macs2.2.7.1-3+b1* test/speedtest*
rm -f debian/*.1 debian/*-man-include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:232: python3.9 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for pyx in $(find MACS2/ -name "*.pyx"); do \
rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done
dh_auto_build
I: pybuild base:232: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/Constants.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO
copying MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO
copying MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
copying MACS2/khash.pxd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2
running build_ext
cythoning MACS2/Prob.pyx to MACS2/Prob.c
cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c
cythoning MACS2/Pileup.pyx to MACS2/Pileup.c
cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c
cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c
cythoning MACS2/Signal.pyx to MACS2/Signal.c
cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c
cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c
cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c
cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c
cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c
cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c
cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c
building 'MACS2.Prob' extension
creating build
creating build/temp.linux-armhf-3.9
creating build/temp.linux-armhf-3.9/MACS2
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Prob.c -o build/temp.linux-armhf-3.9/MACS2/Prob.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Prob.o -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Prob.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.Parser' extension
creating build/temp.linux-armhf-3.9/MACS2/IO
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/Parser.c -o build/temp.linux-armhf-3.9/MACS2/IO/Parser.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/Parser.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/Parser.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.Pileup' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Pileup.c -o build/temp.linux-armhf-3.9/MACS2/Pileup.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/cPosValCalculation.c -o build/temp.linux-armhf-3.9/MACS2/cPosValCalculation.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Pileup.o build/temp.linux-armhf-3.9/MACS2/cPosValCalculation.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Pileup.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.PeakModel' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/PeakModel.c -o build/temp.linux-armhf-3.9/MACS2/PeakModel.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/PeakModel.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakModel.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.PeakDetect' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/PeakDetect.c -o build/temp.linux-armhf-3.9/MACS2/PeakDetect.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/PeakDetect.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakDetect.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.Signal' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Signal.c -o build/temp.linux-armhf-3.9/MACS2/Signal.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Signal.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Signal.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.PeakIO' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/PeakIO.c -o build/temp.linux-armhf-3.9/MACS2/IO/PeakIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/PeakIO.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PeakIO.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraphIO' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-armhf-3.9/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/BedGraphIO.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraphIO.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.FixWidthTrack' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/FixWidthTrack.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/FixWidthTrack.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.PairedEndTrack' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/PairedEndTrack.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PairedEndTrack.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.BedGraph' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/BedGraph.c -o build/temp.linux-armhf-3.9/MACS2/IO/BedGraph.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/BedGraph.o -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraph.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.ScoreTrack' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/ScoreTrack.o -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/ScoreTrack.cpython-39-arm-linux-gnueabihf.so
building 'MACS2.IO.CallPeakUnit' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-armhf-3.9/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/CallPeakUnit.o -lm -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/CallPeakUnit.cpython-39-arm-linux-gnueabihf.so
running build_scripts
creating build/scripts-3.9
copying and adjusting bin/macs2 -> build/scripts-3.9
changing mode of build/scripts-3.9/macs2 from 644 to 755
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info \
--name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs2" > debian/macs2.1
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \
"[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \
> debian/macs2_${subcommand}-man-include; done
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \
PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \
--no-discard-stderr --no-info --version-string="2.2.7.1" \
--include debian/macs2_${subcommand}-man-include \
"python3 bin/macs2 ${subcommand}" > \
debian/macs2_${subcommand}.1; done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test
I: pybuild base:232: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build; python3.9 -m pytest test
============================= test session starts ==============================
platform linux -- Python 3.9.1rc1, pytest-4.6.11, py-1.9.0, pluggy-0.13.0
rootdir: /<<PKGBUILDDIR>>
collected 42 items
test/test_BedGraph.py .... [ 9%]
test/test_FixWidthTrack.py .... [ 19%]
test/test_PairedEndTrack.py .... [ 28%]
test/test_Parser.py ... [ 35%]
test/test_PeakIO.py ... [ 42%]
test/test_Pileup.py .. [ 47%]
test/test_Prob.py ................ [ 85%]
test/test_ScoreTrack.py .... [ 95%]
test/test_Signal.py s. [100%]
===================== 41 passed, 1 skipped in 3.68 seconds =====================
cd test && for PY3VER in 3.9; do \
export PATH=/<<PKGBUILDDIR>>/build/scripts-${PY3VER}:$PATH \
&& export PYTHONPATH=/<<PKGBUILDDIR>>/.pybuild/cpython3_${PY3VER}_MACS2/build \
&& ./cmdlinetest macs2.2.7.1-3+b1-${PY3VER} ; done
1. callpeak
1.1 callpeak narrow
1.2 callpeak broad
1.3 callpeak on PE narrow/broad
2. pileup
3. filterdup
4. predictd
5. randsample
6. refinepeak
7. bdgcmp
8. bdgpeakcall
9. bdgbroadcall
10. bdgdiff
11. cmbreps
12. bdgopt
13. 50k contigs with buffersize
13.1 callpeak
13.2 filterdup
13.3 pileup
13.4 randsample
14. search for errors or warnings in log files
checking macs2.2.7.1-3+b1-3.9_run_50kcontigs/run_callpeak_50kcontigs.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_50kcontigs/run_filterdup_50kcontigs.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_50kcontigs/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_50kcontigs/run_randsample.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgcmp/run_bdgcmp.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgdiff/run_bdgdiff_w_o_file.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgdiff/run_bdgdiff_w_prefix.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgopt/run_bdgopt_max.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgopt/run_bdgopt_min.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgpeakcall/run_bdgpeakcall_cutoff.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_broad/run_callpeak_broad.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow0.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow1.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow2.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow3.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow4.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow/run_callpeak_narrow5.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_pe_broad/run_callpeak_bampe_broad.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_cmbreps/run_cmbreps_fisher.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_cmbreps/run_cmbreps_max.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_cmbreps/run_cmbreps_mean.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_filterdup/run_filterdup.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_filterdup/run_filterdup_d.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_filterdup/run_filterdup_pe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_filterdup/run_filterdup_pe_d.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_CTRL.bed.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_CTRLPE.bampe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_CTRLPE.bedpe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_ChIP.bed.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_ChIPPE.bampe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_pileup/run_pileup_ChIPPE.bedpe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_predictd/run_predictd.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_randsample/run_randsample.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_randsample/run_randsample_bampe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_randsample/run_randsample_bedpe.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_refinepeak/run_refinepeak_w_ofile.log...
... clear!
checking macs2.2.7.1-3+b1-3.9_run_refinepeak/run_refinepeak_w_prefix.log...
... clear!
15. compare with standard outputs
14.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ...
... success!
14.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ...
... success!
14.1.3 checking 50kcontigs run_filterdup_result.bed ...
... success!
14.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ...
... success!
14.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ...
... success!
14.3.1 checking bdgcmp run_bdgcmp_FE.bdg ...
... success!
14.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ...
... success!
14.4.1 checking bdgdiff common.bed ...
... success!
14.4.2 checking bdgdiff cond1.bed ...
... success!
14.4.3 checking bdgdiff cond2.bed ...
... success!
14.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ...
... success!
14.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ...
... success!
14.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ...
... success!
14.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ...
... success!
14.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ...
... success!
14.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ...
... success!
14.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ...
... success!
14.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ...
... success!
14.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ...
... success!
14.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ...
... success!
14.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ...
... success!
14.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ...
... success!
14.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ...
... success!
14.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ...
... success!
14.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ...
... success!
14.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ...
... success!
14.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ...
... success!
14.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ...
... success!
14.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ...
... success!
14.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ...
... success!
14.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ...
... success!
14.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ...
... success!
14.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ...
... success!
14.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ...
... success!
14.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ...
... success!
14.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ...
... success!
14.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ...
... success!
14.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ...
... success!
14.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ...
... success!
14.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ...
... success!
14.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ...
... success!
14.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ...
... success!
14.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ...
... success!
14.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ...
... success!
14.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ...
... success!
14.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ...
... success!
14.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ...
... success!
14.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ...
... success!
14.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ...
... success!
14.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ...
... success!
14.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ...
... success!
14.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ...
... success!
14.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ...
... success!
14.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ...
... success!
14.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ...
... success!
14.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ...
... success!
14.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ...
... success!
14.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ...
... success!
14.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ...
... success!
14.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ...
... success!
14.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ...
... success!
14.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ...
... success!
14.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ...
... success!
14.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ...
... success!
14.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ...
... success!
14.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ...
... success!
14.11.1 checking cmbreps run_cmbreps_fisher.bdg ...
... success!
14.11.2 checking cmbreps run_cmbreps_max.bdg ...
... success!
14.11.3 checking cmbreps run_cmbreps_mean.bdg ...
... success!
14.12.1 checking filterdup run_filterdup_result.bed ...
... success!
14.12.2 checking filterdup run_filterdup_result_pe.bedpe ...
... success!
14.13.1 checking pileup run_pileup_CTRL.bed.bdg ...
... success!
14.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ...
... success!
14.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ...
... success!
14.13.4 checking pileup run_pileup_ChIP.bed.bdg ...
... success!
14.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ...
... success!
14.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ...
... success!
14.14.1 checking refinepeak run_refinepeak_w_ofile.bed ...
... success!
14.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ...
... success!
14.15.1 checking bdgopt run_bdgopt_max.bdg ...
... success!
14.15.2 checking bdgopt run_bdgopt_min.bdg ...
... success!
16. brief speed test
CPU time (mm:ss): 00:04:00
Max mem (KB): 184784
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:232: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/macs
running install
running build
running build_py
running build_ext
skipping 'MACS2/Prob.c' Cython extension (up-to-date)
skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date)
skipping 'MACS2/Pileup.c' Cython extension (up-to-date)
skipping 'MACS2/PeakModel.c' Cython extension (up-to-date)
skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date)
skipping 'MACS2/Signal.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date)
skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date)
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/macs/usr
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Constants.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/Parser.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PeakIO.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraphIO.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/FixWidthTrack.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PairedEndTrack.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraph.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/ScoreTrack.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/CallPeakUnit.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/cPosValCalculation.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/khash.pxd -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Prob.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Pileup.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakModel.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakDetect.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/Signal.cpython-39-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/Constants.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/callpeak_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/OptValidator.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/OutputWriter.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/pileup_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/filterdup_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/predictd_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/randsample_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/refinepeak_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgcmp_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgpeakcall_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgbroadcall_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgdiff_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/cmbreps_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgopt_cmd.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/Constants.py to Constants.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/OptValidator.py to OptValidator.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/OutputWriter.py to OutputWriter.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.cpython-39.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__init__.py to __init__.cpython-39.pyc
running install_egg_info
running egg_info
creating MACS2.egg-info
writing MACS2.egg-info/PKG-INFO
writing dependency_links to MACS2.egg-info/dependency_links.txt
writing requirements to MACS2.egg-info/requires.txt
writing top-level names to MACS2.egg-info/top_level.txt
writing manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching '.gitignore'
warning: no previously-included files found matching '.travis.yml'
no previously-included directories found matching '.github'
no previously-included directories found matching 'DOCKER'
writing manifest file 'MACS2.egg-info/SOURCES.txt'
Copying MACS2.egg-info to /<<PKGBUILDDIR>>/debian/macs/usr/lib/python3.9/dist-packages/MACS2-2.2.7.1.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/macs/usr/bin
copying build/scripts-3.9/macs2 -> /<<PKGBUILDDIR>>/debian/macs/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/macs/usr/bin/macs2 to 755
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installexamples -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_lintian -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -a -O--buildsystem=pybuild
dh_strip -a -a -O--buildsystem=pybuild
dh_makeshlibs -a -a -O--buildsystem=pybuild
dh_shlibdeps -a -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined
dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'macs' in '../macs_2.2.7.1-3+b1_armhf.deb'.
dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_2.2.7.1-3+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../macs_2.2.7.1-3+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-09T11:14:38Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
macs_2.2.7.1-3+b1_armhf.changes:
--------------------------------
Format: 1.8
Date: Wed, 15 Jul 2020 23:27:39 +0200
Source: macs (2.2.7.1-3)
Binary: macs macs-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 2.2.7.1-3+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
macs - Model-based Analysis of ChIP-Seq on short reads sequencers
Changes:
macs (2.2.7.1-3+b1) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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Files:
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
macs-dbgsym_2.2.7.1-3+b1_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 6595688 bytes: control archive=1188 bytes.
873 bytes, 12 lines control
1462 bytes, 14 lines md5sums
Package: macs-dbgsym
Source: macs (2.2.7.1-3)
Version: 2.2.7.1-3+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 6913
Depends: macs (= 2.2.7.1-3+b1)
Section: debug
Priority: optional
Description: debug symbols for macs
Build-Ids: 00f2ad47539f8c452e056b15bd22505071c6fc4d 1678136cff5c4a8d3ba268829ecefddba69bef9b 526bca1d73d3084455ad1886415f64ddc643b17d 5ee53d0fbf4d01412a2ca99587934bb0907b3dbc 60d55b8926ac2d4bb499646bb4f5402fb712db1e 6ee6c560938dbc04a7cfed369f1bbd58c7f2ce18 76689cb1e9e2181b2f9e7de3a9c7ad0d5d5a2a28 7de78cc57653827e8230b1e5c73bb489f2eea9e3 96c8550f9b01163ff3b2c8d86785cd498d5c6728 96ffd5e25d300bca50383e3909e7481c03db26c6 b662234f0a3e5816c4dd624a033b2593fd3cf88a d21d96e9262b795f340b07901d8966a022ee7b23 e797d9dc9e5ed750e826a316cabe60fbbb0bff84
drwxr-xr-x root/root 0 2020-07-15 21:27 ./
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/00/
-rw-r--r-- root/root 441492 2020-07-15 21:27 ./usr/lib/debug/.build-id/00/f2ad47539f8c452e056b15bd22505071c6fc4d.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/16/
-rw-r--r-- root/root 244112 2020-07-15 21:27 ./usr/lib/debug/.build-id/16/78136cff5c4a8d3ba268829ecefddba69bef9b.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/52/
-rw-r--r-- root/root 745156 2020-07-15 21:27 ./usr/lib/debug/.build-id/52/6bca1d73d3084455ad1886415f64ddc643b17d.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/5e/
-rw-r--r-- root/root 909812 2020-07-15 21:27 ./usr/lib/debug/.build-id/5e/e53d0fbf4d01412a2ca99587934bb0907b3dbc.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/60/
-rw-r--r-- root/root 172704 2020-07-15 21:27 ./usr/lib/debug/.build-id/60/d55b8926ac2d4bb499646bb4f5402fb712db1e.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/6e/
-rw-r--r-- root/root 131172 2020-07-15 21:27 ./usr/lib/debug/.build-id/6e/e6c560938dbc04a7cfed369f1bbd58c7f2ce18.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/76/
-rw-r--r-- root/root 1112444 2020-07-15 21:27 ./usr/lib/debug/.build-id/76/689cb1e9e2181b2f9e7de3a9c7ad0d5d5a2a28.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/7d/
-rw-r--r-- root/root 407896 2020-07-15 21:27 ./usr/lib/debug/.build-id/7d/e78cc57653827e8230b1e5c73bb489f2eea9e3.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/96/
-rw-r--r-- root/root 179704 2020-07-15 21:27 ./usr/lib/debug/.build-id/96/c8550f9b01163ff3b2c8d86785cd498d5c6728.debug
-rw-r--r-- root/root 891972 2020-07-15 21:27 ./usr/lib/debug/.build-id/96/ffd5e25d300bca50383e3909e7481c03db26c6.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/b6/
-rw-r--r-- root/root 766464 2020-07-15 21:27 ./usr/lib/debug/.build-id/b6/62234f0a3e5816c4dd624a033b2593fd3cf88a.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/d2/
-rw-r--r-- root/root 379304 2020-07-15 21:27 ./usr/lib/debug/.build-id/d2/1d96e9262b795f340b07901d8966a022ee7b23.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.build-id/e7/
-rw-r--r-- root/root 641772 2020-07-15 21:27 ./usr/lib/debug/.build-id/e7/97d9dc9e5ed750e826a316cabe60fbbb0bff84.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 22540 2020-07-15 21:27 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/macs.debug
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-07-15 21:27 ./usr/share/doc/macs-dbgsym -> macs
macs_2.2.7.1-3+b1_armhf.deb
---------------------------
new Debian package, version 2.0.
size 2353872 bytes: control archive=2940 bytes.
984 bytes, 19 lines control
5321 bytes, 61 lines md5sums
233 bytes, 12 lines * postinst #!/bin/sh
382 bytes, 12 lines * prerm #!/bin/sh
Package: macs
Source: macs (2.2.7.1-3)
Version: 2.2.7.1-3+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 5234
Depends: python3 (<< 3.10), python3 (>= 3.9~), python3-numpy, python3:any, libc6 (>= 2.29)
Section: science
Priority: optional
Homepage: https://github.com/taoliu/MACS/
Description: Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
drwxr-xr-x root/root 0 2020-07-15 21:27 ./
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/bin/
-rwxr-xr-x root/root 67796 2020-07-15 21:27 ./usr/bin/macs2
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/
-rw-r--r-- root/root 30146 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/dependency_links.txt
-rw-r--r-- root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/requires.txt
-rw-r--r-- root/root 6 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/top_level.txt
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/
-rw-r--r-- root/root 845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/Constants.py
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/
-rw-r--r-- root/root 382268 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraph.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 73620 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraphIO.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 415852 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/CallPeakUnit.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 345684 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/FixWidthTrack.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 237788 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/PairedEndTrack.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 450612 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/Parser.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 493964 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/PeakIO.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 599008 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/ScoreTrack.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 0 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/IO/__init__.py
-rw-r--r-- root/root 28454 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OptValidator.py
-rw-r--r-- root/root 10842 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OutputWriter.py
-rw-r--r-- root/root 112880 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/PeakDetect.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 216208 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/PeakModel.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 210844 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Pileup.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 103576 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Prob.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 138532 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Signal.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root 24 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/__init__.py
-rw-r--r-- root/root 2141 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgbroadcall_cmd.py
-rw-r--r-- root/root 3712 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgcmp_cmd.py
-rw-r--r-- root/root 4318 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgdiff_cmd.py
-rw-r--r-- root/root 2388 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgopt_cmd.py
-rw-r--r-- root/root 2696 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgpeakcall_cmd.py
-rw-r--r-- root/root 1157 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cPosValCalculation.pxd
-rw-r--r-- root/root 19674 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/callpeak_cmd.py
-rw-r--r-- root/root 1944 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cmbreps_cmd.py
-rw-r--r-- root/root 9715 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/diffpeak_cmd.py
-rw-r--r-- root/root 4583 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/filterdup_cmd.py
-rw-r--r-- root/root 3199 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/khash.pxd
-rw-r--r-- root/root 3964 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/pileup_cmd.py
-rw-r--r-- root/root 3178 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/predictd_cmd.py
-rw-r--r-- root/root 3888 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/randsample_cmd.py
-rw-r--r-- root/root 6845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/refinepeak_cmd.py
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/macs/
-rw-r--r-- root/root 9676 2020-04-12 00:00 ./usr/share/doc/macs/README.md.gz
-rw-r--r-- root/root 671 2020-07-15 21:27 ./usr/share/doc/macs/README.test
-rw-r--r-- root/root 221 2020-07-15 21:27 ./usr/share/doc/macs/changelog.Debian.armhf.gz
-rw-r--r-- root/root 2178 2020-07-15 21:27 ./usr/share/doc/macs/changelog.Debian.gz
-rw-r--r-- root/root 17984 2020-04-12 00:00 ./usr/share/doc/macs/changelog.gz
-rw-r--r-- root/root 3361 2020-07-15 21:27 ./usr/share/doc/macs/copyright
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/macs/examples/
-rw-r--r-- root/root 129766 2020-07-15 21:27 ./usr/share/doc/macs/examples/aluY.chr1.bed.gz
-rw-r--r-- root/root 1128077 2020-07-15 21:27 ./usr/share/doc/macs/examples/gerp.chr1.bed.gz
-rw-r--r-- root/root 427 2020-07-15 21:27 ./usr/share/doc/macs/run-unit-test
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/lintian/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 107 2020-07-15 21:27 ./usr/share/lintian/overrides/macs
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/man/
drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/man/man1/
-rw-r--r-- root/root 1124 2020-07-15 21:27 ./usr/share/man/man1/macs2.1.gz
-rw-r--r-- root/root 934 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgbroadcall.1.gz
-rw-r--r-- root/root 1399 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgcmp.1.gz
-rw-r--r-- root/root 1198 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgdiff.1.gz
-rw-r--r-- root/root 910 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgopt.1.gz
-rw-r--r-- root/root 923 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgpeakcall.1.gz
-rw-r--r-- root/root 5693 2020-07-15 21:27 ./usr/share/man/man1/macs2_callpeak.1.gz
-rw-r--r-- root/root 783 2020-07-15 21:27 ./usr/share/man/man1/macs2_cmbreps.1.gz
-rw-r--r-- root/root 1950 2020-07-15 21:27 ./usr/share/man/man1/macs2_filterdup.1.gz
-rw-r--r-- root/root 1762 2020-07-15 21:27 ./usr/share/man/man1/macs2_pileup.1.gz
-rw-r--r-- root/root 1672 2020-07-15 21:27 ./usr/share/man/man1/macs2_predictd.1.gz
-rw-r--r-- root/root 1552 2020-07-15 21:27 ./usr/share/man/man1/macs2_randsample.1.gz
-rw-r--r-- root/root 1340 2020-07-15 21:27 ./usr/share/man/man1/macs2_refinepeak.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 1446520
Build-Time: 1283
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 366
Job: macs_2.2.7.1-3
Machine Architecture: armhf
Package: macs
Package-Time: 1695
Source-Version: 2.2.7.1-3
Space: 1446520
Status: successful
Version: 2.2.7.1-3+b1
--------------------------------------------------------------------------------
Finished at 2020-12-09T11:14:38Z
Build needed 00:28:15, 1446520k disk space