macs →
2.1.1.20160309-1+b1 →
armhf → 2017-10-28 22:44:01
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| macs 2.1.1.20160309-1+b1 (armhf) Sat, 28 Oct 2017 22:03:41 +0000 |
+==============================================================================+
Package: macs
Version: 2.1.1.20160309-1+b1
Source Version: 2.1.1.20160309-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-d5542bff-a1af-4b74-863b-85c720e24191' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.1 MB]
Fetched 22.4 MB in 29s (771 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'macs' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/macs.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/macs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1637 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main macs 2.1.1.20160309-1 (dsc) [2099 B]
Get:2 http://172.17.0.1/private buster-staging/main macs 2.1.1.20160309-1 (tar) [1628 kB]
Get:3 http://172.17.0.1/private buster-staging/main macs 2.1.1.20160309-1 (diff) [7628 B]
Fetched 1637 kB in 0s (1776 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/macs-3jHMu8/macs-2.1.1.20160309' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/macs-3jHMu8' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-GbvZBT/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-GbvZBT/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-GbvZBT/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (3017 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates libreadline5 libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 73 not upgraded.
Need to get 776 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [776 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 776 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15126 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9), dh-python, python-all-dev, python-numpy, python-setuptools, help2man, cython
Filtered Build-Depends: debhelper (>= 9), dh-python, python-all-dev, python-numpy, python-setuptools, help2man, cython
dpkg-deb: building package 'sbuild-build-depends-macs-dummy' in '/<<BUILDDIR>>/resolver-GbvZBT/apt_archive/sbuild-build-depends-macs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-macs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Sources [523 B]
Get:5 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ Packages [604 B]
Fetched 2460 B in 0s (3590 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install macs build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates libreadline5 libsasl2-modules openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cpp-7 cython
debhelper dh-autoreconf dh-python dh-strip-nondeterminism file g++-7 gcc-7
gcc-7-base gettext gettext-base groff-base help2man intltool-debian
libarchive-zip-perl libasan4 libatomic1 libblas3 libbsd0 libcc1-0
libcilkrts5 libcroco3 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgcc-7-dev libgcc1 libgfortran4
libglib2.0-0 libgomp1 libicu57 liblapack3 libmagic-mgc libmagic1 libmpdec2
libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.6-minimal libpython3.6-stdlib libsigsegv2 libstdc++-7-dev
libstdc++6 libtimedate-perl libtool libubsan0 libxml2 m4 man-db mime-support
po-debconf python python-all python-all-dev python-dev python-minimal
python-numpy python-pkg-resources python-setuptools python2.7 python2.7-dev
python2.7-minimal python3 python3-minimal python3.6 python3.6-minimal
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-7-locales cython-doc dh-make gcc-7-doc libstdc++6-7-dbg
libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan4-dbg
liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg
libquadmath0-dbg gettext-doc libasprintf-dev libgettextpo-dev groff
libstdc++-7-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc
less www-browser libmail-box-perl python-doc python-tk gfortran python-nose
python-numpy-dbg python-numpy-doc python-setuptools-doc python2.7-doc
binfmt-support python3-doc python3-tk python3-venv python3.6-venv
python3.6-doc
Recommended packages:
curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cython debhelper
dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base
groff-base help2man intltool-debian libarchive-zip-perl libblas3 libbsd0
libcroco3 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl
libgfortran4 libglib2.0-0 libicu57 liblapack3 libmagic-mgc libmagic1
libmpdec2 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib
libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib
libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib libsigsegv2
libtimedate-perl libtool libxml2 m4 man-db mime-support po-debconf python
python-all python-all-dev python-dev python-minimal python-numpy
python-pkg-resources python-setuptools python2.7 python2.7-dev
python2.7-minimal python3 python3-minimal python3.6 python3.6-minimal
sbuild-build-depends-macs-dummy
The following packages will be upgraded:
cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libatomic1 libcc1-0 libcilkrts5
libgcc-7-dev libgcc1 libgomp1 libstdc++-7-dev libstdc++6 libubsan0
14 upgraded, 65 newly installed, 0 to remove and 59 not upgraded.
Need to get 81.2 MB of archives.
After this operation, 134 MB disk space will be freed.
Get:1 copy:/<<BUILDDIR>>/resolver-GbvZBT/apt_archive ./ sbuild-build-depends-macs-dummy 0.invalid.0 [812 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 7.2.0-11 [63.1 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf gcc-7-base armhf 7.2.0-11 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:7.2.0-11 [38.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 7.2.0-11 [6732 B]
Get:6 http://172.17.0.1/private buster-staging/main armhf libasan4 armhf 7.2.0-11 [302 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libubsan0 armhf 7.2.0-11 [106 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libcilkrts5 armhf 7.2.0-11 [35.3 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf cpp-7 armhf 7.2.0-11 [5136 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 7.2.0-11 [30.3 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-7 armhf 7.2.0-11 [5585 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf gcc-7 armhf 7.2.0-11 [5458 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-7-dev armhf 7.2.0-11 [670 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libstdc++-7-dev armhf 7.2.0-11 [1500 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 7.2.0-11 [335 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-2 [95.8 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.14 [178 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.14-2 [393 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.14-2 [1091 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.14-1 [40.7 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.3-1 [67.1 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.14-2 [1854 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.14-2 [292 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.14-1 [20.1 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.14-1 [155 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.3-1 [564 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.3-1 [1232 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.3-1 [35.6 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-1 [67.5 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.3-1 [2055 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.3-1 [218 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.3-1 [19.0 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf dh-python all 2.20170125 [86.8 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.3-1 [22.1 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.32-1 [225 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.32-1 [105 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.32-1 [63.7 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-8 [7411 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-5 [609 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf cython armhf 0.26.1-0.3+rpi1 [1748 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.039-1 [18.2 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.039-1 [11.6 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.54.1-1 [2653 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.9.2 [979 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf help2man armhf 1.47.5 [162 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.2.0-11 [191 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.7.1-4 [103 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.3-1 [120 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.7.1-4 [1508 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.14-2 [904 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.14-2 [27.6 MB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.14-1 [20.1 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libpython-all-dev armhf 2.7.14-1 [958 B]
Get:73 http://172.17.0.1/private buster-staging/main armhf python-all armhf 2.7.14-1 [942 B]
Get:74 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.14-2 [295 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.14-1 [1130 B]
Get:76 http://172.17.0.1/private buster-staging/main armhf python-all-dev armhf 2.7.14-1 [964 B]
Get:77 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.13.1-1 [1727 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 36.2.7-2 [169 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf python-setuptools all 36.2.7-2 [302 kB]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 15126 files and directories currently installed.)
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Setting up gcc-7-base:armhf (7.2.0-11) ...
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Unpacking libgcc1:armhf (1:7.2.0-11) over (1:7.2.0-5) ...
Setting up libgcc1:armhf (1:7.2.0-11) ...
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Preparing to unpack .../03-libcilkrts5_7.2.0-11_armhf.deb ...
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Preparing to unpack .../04-cpp-7_7.2.0-11_armhf.deb ...
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Preparing to unpack .../10-libstdc++6_7.2.0-11_armhf.deb ...
Unpacking libstdc++6:armhf (7.2.0-11) over (7.2.0-5) ...
Setting up libstdc++6:armhf (7.2.0-11) ...
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Processing triggers for libc-bin (2.24-14) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.29.1-3+rpi1 dpkg-dev_1.18.24 g++-7_7.2.0-11 gcc-7_7.2.0-11 libc6-dev_2.24-14 libstdc++-7-dev_7.2.0-11 libstdc++6_7.2.0-11 linux-libc-dev_4.9.30-2+deb9u2+rpi1+stretch
Package versions: adduser_3.116 apt_1.5 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20161112.1 base-files_10+rpi1 base-passwd_3.5.44 bash_4.4-5 binutils_2.29.1-3+rpi1 binutils-arm-linux-gnueabihf_2.29.1-3+rpi1 binutils-common_2.29.1-3+rpi1 bsdmainutils_9.0.14 bsdutils_1:2.29.2-5 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.2.0-11 cython_0.26.1-0.3+rpi1 dash_0.5.8-2.5 debconf_1.5.63 debhelper_10.9.2 debianutils_4.8.2 dh-autoreconf_14 dh-python_2.20170125 dh-strip-nondeterminism_0.039-1 diffutils_1:3.6-1 dirmngr_2.2.1-1 dmsetup_2:1.02.142-1 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.6-1 e2fsprogs_1.43.6-1 fakeroot_1.22-1 fdisk_2.29.2-5 file_1:5.32-1 findutils_4.6.0+git+20170729-2 g++_4:7.2.0-1d1 g++-7_7.2.0-11 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-11 gcc-7-base_7.2.0-11 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gnupg_2.2.1-1 gnupg-agent_2.2.1-1 gnupg-l10n_2.2.1-1 gnupg-utils_2.2.1-1 gpg_2.2.1-1 gpg-agent_2.2.1-1 gpg-wks-client_2.2.1-1 gpg-wks-server_2.2.1-1 gpgconf_2.2.1-1 gpgsm_2.2.1-1 gpgv_2.2.1-1 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5 help2man_1.47.5 hostname_3.18 init-system-helpers_1.49 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.0-11 libapt-pkg5.0_1.5 libarchive-zip-perl_1.59-1 libasan4_7.2.0-11 libassuan0_2.4.3-3 libatomic1_7.2.0-11 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1+b1 libbinutils_2.29.1-3+rpi1 libblas3_3.7.1-4 libblkid1_2.29.2-5 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-14 libc-dev-bin_2.24-14 libc6_2.24-14 libc6-dev_2.24-14 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_7.2.0-11 libcilkrts5_7.2.0-11 libcomerr2_1.43.6-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.11.16+really1.10.22-1 libdebconfclient0_0.230 libdevmapper1.02.1_2:1.02.142-1 libdpkg-perl_1.18.24 libdrm-common_2.4.82-1+rpi1 libdrm2_2.4.82-1+rpi1 libexpat1_2.2.3-1 libexpat1-dev_2.2.3-1 libfakeroot_1.22-1 libfdisk1_2.29.2-5 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.039-1 libgcc-7-dev_7.2.0-11 libgcc1_1:7.2.0-11 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libgfortran4_7.2.0-11 libglib2.0-0_2.54.1-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.15-2 libgomp1_7.2.0-11 libgpg-error0_1.27-3 libhogweed4_3.3-2 libicu57_57.1-8 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2 libisl15_0.18-1 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libksba8_1.3.5-2 liblapack3_3.7.1-4 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.29.2-5 libmpc3_1.0.3-2 libmpdec2_2.4.2-1 libmpfr4_3.1.6-1 libncurses5_6.0+20170902-1 libncursesw5_6.0+20170902-1 libnettle6_3.3-2 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.5-2 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-4 libperl5.24_5.24.1-4 libperl5.26_5.26.0-8 libpipeline1_1.4.2-1 libplymouth4_0.9.3-1 libpng16-16_1.6.32-3 libprocps6_2:3.3.12-3 libpython-all-dev_2.7.14-1 libpython-dev_2.7.14-1 libpython-stdlib_2.7.14-1 libpython2.7_2.7.14-2 libpython2.7-dev_2.7.14-2 libpython2.7-minimal_2.7.14-2 libpython2.7-stdlib_2.7.14-2 libpython3-stdlib_3.6.3-1 libpython3.6-minimal_3.6.3-1 libpython3.6-stdlib_3.6.3-1 libreadline5_5.2+dfsg-3 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libsmartcols1_2.29.2-5 libsqlite3-0_3.20.1-1 libss2_1.43.6-1 libssl1.1_1.1.0f-5 libstdc++-7-dev_7.2.0-11 libstdc++6_7.2.0-11 libsystemd0_234-3 libtasn1-6_4.12-2.1 libtext-charwidth-perl_0.04-7.1 libtext-iconv-perl_1.7-5+b9 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20170902-1 libtool_2.4.6-2 libubsan0_7.2.0-11 libudev1_234-3 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-5 libxml2_2.9.4+dfsg1-5 linux-base_4.5 linux-libc-dev_4.9.30-2+deb9u2+rpi1+stretch login_1:4.4-4.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mime-support_3.60 mount_2.29.2-5 mountall_2.54 multiarch-support_2.24-14 ncurses-base_6.0+20170902-1 ncurses-bin_6.0+20170902-1 openssl_1.1.0f-5 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.26.0-8 perl-base_5.26.0-8 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.0-8 pinentry-curses_1.0.0-2 plymouth_0.9.3-1 po-debconf_1.0.20 procps_2:3.3.12-3 python_2.7.14-1 python-all_2.7.14-1 python-all-dev_2.7.14-1 python-dev_2.7.14-1 python-minimal_2.7.14-1 python-numpy_1:1.13.1-1 python-pkg-resources_36.2.7-2 python-setuptools_36.2.7-2 python2.7_2.7.14-2 python2.7-dev_2.7.14-2 python2.7-minimal_2.7.14-2 python3_3.6.3-1 python3-minimal_3.6.3-1 python3.6_3.6.3-1 python3.6-minimal_3.6.3-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-macs-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-3 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2017b-2 udev_234-3 util-linux_2.29.2-5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri May 13 18:16:24 2016 UTC
gpgv: using RSA key 3C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./macs_2.1.1.20160309-1.dsc
dpkg-source: info: extracting macs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking macs_2.1.1.20160309.orig.tar.gz
dpkg-source: info: unpacking macs_2.1.1.20160309-1.debian.tar.xz
dpkg-source: info: applying spelling
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.1.1.20160309-1+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-d5542bff-a1af-4b74-863b-85c720e24191
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package macs
dpkg-buildpackage: info: source version 2.1.1.20160309-1+b1
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build macs-2.1.1.20160309
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with python2 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:184: python2.7 setup.py clean
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
rm -f debian/*.1 debian/*-man-include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean -O--buildsystem=pybuild
debian/rules build-arch
dh build-arch --with python2 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for pyx in `find MACS2/ -name "*.pyx" | grep -v khash`; do \
rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done
cp setup.py setup.py.orig
cp setup_w_cython.py setup.py
dh_auto_build
I: pybuild base:184: /usr/bin/python setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/Constants.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
copying MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2
creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO
copying MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO
copying MACS2/IO/BinKeeper.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO
copying MACS2/IO/test_processing.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO
copying MACS2/IO/test_threading.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO
creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data
copying MACS2/data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data
copying MACS2/data/g0.01.dat -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data
copying MACS2/data/g0.05.dat -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data
running build_ext
cythoning MACS2/Prob.pyx to MACS2/Prob.c
building 'MACS2.Prob' extension
creating build
creating build/temp.linux-armhf-2.7
creating build/temp.linux-armhf-2.7/MACS2
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/Prob.c -o build/temp.linux-armhf-2.7/MACS2/Prob.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/Prob.o -lm -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Prob.so
cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c
building 'MACS2.IO.Parser' extension
creating build/temp.linux-armhf-2.7/MACS2/IO
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/IO/Parser.c -o build/temp.linux-armhf-2.7/MACS2/IO/Parser.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/Parser.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/Parser.so
cythoning MACS2/Pileup.pyx to MACS2/Pileup.c
building 'MACS2.Pileup' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/Pileup.c -o build/temp.linux-armhf-2.7/MACS2/Pileup.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/cPosValCalculation.c -o build/temp.linux-armhf-2.7/MACS2/cPosValCalculation.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/Pileup.o build/temp.linux-armhf-2.7/MACS2/cPosValCalculation.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Pileup.so
cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c
building 'MACS2.PeakModel' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/PeakModel.c -o build/temp.linux-armhf-2.7/MACS2/PeakModel.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/PeakModel.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/PeakModel.so
cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c
building 'MACS2.PeakDetect' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c MACS2/PeakDetect.c -o build/temp.linux-armhf-2.7/MACS2/PeakDetect.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/PeakDetect.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/PeakDetect.so
cythoning MACS2/Signal.pyx to MACS2/Signal.c
building 'MACS2.Signal' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/Signal.c -o build/temp.linux-armhf-2.7/MACS2/Signal.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/Signal.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Signal.so
cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c
building 'MACS2.IO.PeakIO' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c MACS2/IO/PeakIO.c -o build/temp.linux-armhf-2.7/MACS2/IO/PeakIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/PeakIO.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/PeakIO.so
cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c
building 'MACS2.IO.BedGraphIO' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-armhf-2.7/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/BedGraphIO.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/BedGraphIO.so
cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c
building 'MACS2.IO.FixWidthTrack' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-armhf-2.7/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/FixWidthTrack.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/FixWidthTrack.so
cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c
building 'MACS2.IO.PairedEndTrack' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-armhf-2.7/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/PairedEndTrack.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/PairedEndTrack.so
cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c
building 'MACS2.IO.BedGraph' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c MACS2/IO/BedGraph.c -o build/temp.linux-armhf-2.7/MACS2/IO/BedGraph.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/BedGraph.o -lm -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/BedGraph.so
cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c
building 'MACS2.IO.ScoreTrack' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-armhf-2.7/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/ScoreTrack.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/ScoreTrack.so
cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c
building 'MACS2.IO.CallPeakUnit' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-armhf-2.7/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/IO/CallPeakUnit.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/CallPeakUnit.so
cythoning MACS2/hashtable.pyx to MACS2/hashtable.c
warning: MACS2/khash.pxd:67:21: Declarations should not be declared inline.
warning: MACS2/khash.pxd:68:32: Declarations should not be declared inline.
warning: MACS2/khash.pxd:69:30: Declarations should not be declared inline.
warning: MACS2/khash.pxd:70:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:71:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:72:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:73:28: Declarations should not be declared inline.
warning: MACS2/khash.pxd:83:23: Declarations should not be declared inline.
warning: MACS2/khash.pxd:84:34: Declarations should not be declared inline.
warning: MACS2/khash.pxd:85:32: Declarations should not be declared inline.
warning: MACS2/khash.pxd:86:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:87:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:88:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:89:30: Declarations should not be declared inline.
building 'MACS2.hashtable' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS2/ -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/hashtable.c -o build/temp.linux-armhf-2.7/MACS2/hashtable.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/hashtable.o -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/hashtable.so
cythoning MACS2/Statistics.pyx to MACS2/Statistics.c
warning: MACS2/khash.pxd:67:21: Declarations should not be declared inline.
warning: MACS2/khash.pxd:68:32: Declarations should not be declared inline.
warning: MACS2/khash.pxd:69:30: Declarations should not be declared inline.
warning: MACS2/khash.pxd:70:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:71:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:72:31: Declarations should not be declared inline.
warning: MACS2/khash.pxd:73:28: Declarations should not be declared inline.
warning: MACS2/khash.pxd:83:23: Declarations should not be declared inline.
warning: MACS2/khash.pxd:84:34: Declarations should not be declared inline.
warning: MACS2/khash.pxd:85:32: Declarations should not be declared inline.
warning: MACS2/khash.pxd:86:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:87:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:88:33: Declarations should not be declared inline.
warning: MACS2/khash.pxd:89:30: Declarations should not be declared inline.
building 'MACS2.Statistics' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS2/ -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/Statistics.c -o build/temp.linux-armhf-2.7/MACS2/Statistics.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS2/ -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c MACS2/cStatistics.c -o build/temp.linux-armhf-2.7/MACS2/cStatistics.o -w -O3 -ffast-math
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-LSpDd8/python2.7-2.7.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-2.7/MACS2/Statistics.o build/temp.linux-armhf-2.7/MACS2/cStatistics.o -lm -o /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Statistics.so
running build_scripts
creating build/scripts-2.7
copying and adjusting bin/macs2 -> build/scripts-2.7
changing mode of build/scripts-2.7/macs2 from 664 to 775
PYTHONPATH=./.pybuild/pythonX.Y_2.7/build/ help2man \
--no-discard-stderr --no-info \
--name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python bin/macs2" > debian/macs2.1
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \
"[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \
> debian/macs2_${subcommand}-man-include; done
for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \
PYTHONPATH=./.pybuild/pythonX.Y_2.7/build/ help2man \
--no-discard-stderr --no-info --version-string="2.1.1.20160309" \
--include debian/macs2_${subcommand}-man-include \
"python bin/macs2 ${subcommand}" > \
debian/macs2_${subcommand}.1; done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:184: cd /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build; python2.7 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem=pybuild
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:184: /usr/bin/python setup.py install --root /<<PKGBUILDDIR>>/debian/macs
running install
running build
running build_py
running build_ext
skipping 'MACS2/Prob.c' Cython extension (up-to-date)
skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date)
skipping 'MACS2/Pileup.c' Cython extension (up-to-date)
skipping 'MACS2/PeakModel.c' Cython extension (up-to-date)
skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date)
skipping 'MACS2/Signal.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date)
skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date)
skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date)
skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date)
skipping 'MACS2/hashtable.c' Cython extension (up-to-date)
skipping 'MACS2/Statistics.c' Cython extension (up-to-date)
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/macs/usr
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/bdgbroadcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/bdgcmp_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/bdgdiff_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/bdgopt_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/bdgpeakcall_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/callpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/cmbreps_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Constants.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/diffpeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/filterdup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/OptValidator.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/OutputWriter.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/pileup_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/predictd_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/randsample_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/refinepeak_cmd.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/BinKeeper.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/test_processing.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/test_threading.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/Parser.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/PeakIO.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/BedGraphIO.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/FixWidthTrack.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/PairedEndTrack.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/BedGraph.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/ScoreTrack.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/CallPeakUnit.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/__init__.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/test_processing.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/IO/test_threading.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO
creating /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/data
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data/__init__.py -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/data
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data/g0.01.dat -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/data
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/data/g0.05.dat -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/data
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Prob.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Pileup.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/PeakModel.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/PeakDetect.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Signal.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/hashtable.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Statistics.so -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/__init__.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
copying /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/MACS2/Constants.pyc -> /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/Constants.py to Constants.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/OptValidator.py to OptValidator.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/OutputWriter.py to OutputWriter.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO/__init__.py to __init__.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO/BinKeeper.py to BinKeeper.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO/test_processing.py to test_processing.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/IO/test_threading.py to test_threading.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2/data/__init__.py to __init__.pyc
running install_egg_info
running egg_info
writing requirements to MACS2.egg-info/requires.txt
writing MACS2.egg-info/PKG-INFO
writing top-level names to MACS2.egg-info/top_level.txt
writing dependency_links to MACS2.egg-info/dependency_links.txt
reading manifest file 'MACS2.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'MANIFEST'
no previously-included directories found matching 'test'
writing manifest file 'MACS2.egg-info/SOURCES.txt'
Copying MACS2.egg-info to /<<PKGBUILDDIR>>/debian/macs/usr/lib/python2.7/dist-packages/MACS2-2.1.1.20160309.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/macs/usr/bin
copying build/scripts-2.7/macs2 -> /<<PKGBUILDDIR>>/debian/macs/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/macs/usr/bin/macs2 to 775
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 fs:322: renaming PeakDetect.so to PeakDetect.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming PeakModel.so to PeakModel.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming Pileup.so to Pileup.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming Prob.so to Prob.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming Signal.so to Signal.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming Statistics.so to Statistics.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming hashtable.so to hashtable.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming BedGraph.so to BedGraph.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming BedGraphIO.so to BedGraphIO.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming CallPeakUnit.so to CallPeakUnit.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming FixWidthTrack.so to FixWidthTrack.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming PairedEndTrack.so to PairedEndTrack.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming Parser.so to Parser.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming PeakIO.so to PeakIO.arm-linux-gnueabihf.so
I: dh_python2 fs:322: renaming ScoreTrack.so to ScoreTrack.arm-linux-gnueabihf.so
dh_lintian -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package macs: unused substitution variable ${python:Versions}
dpkg-gencontrol: warning: package macs: unused substitution variable ${python:Versions}
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_2.1.1.20160309-1+b1_armhf.deb'.
dpkg-deb: building package 'macs' in '../macs_2.1.1.20160309-1+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../macs_2.1.1.20160309-1+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build macs-2.1.1.20160309
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-10-28T22:43:48Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
macs_2.1.1.20160309-1+b1_armhf.changes:
---------------------------------------
Format: 1.8
Date: Fri, 13 May 2016 10:49:54 -0700
Source: macs (2.1.1.20160309-1)
Binary: macs
Binary-Only: yes
Architecture: armhf
Version: 2.1.1.20160309-1+b1
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
macs - Model-based Analysis of ChIP-Seq on short reads sequencers
Changes:
macs (2.1.1.20160309-1+b1) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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Files:
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d95bae579f57c85bca19ee06b5fe9b82 1102656 science optional macs_2.1.1.20160309-1+b1_armhf.deb
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
macs-dbgsym_2.1.1.20160309-1+b1_armhf.deb
-----------------------------------------
new debian package, version 2.0.
size 3214128 bytes: control archive=1220 bytes.
976 bytes, 12 lines control
1590 bytes, 15 lines md5sums
Package: macs-dbgsym
Source: macs (2.1.1.20160309-1)
Version: 2.1.1.20160309-1+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 3549
Depends: macs (= 2.1.1.20160309-1+b1)
Section: debug
Priority: optional
Description: debug symbols for macs
Build-Ids: 0d781e48875b19ac023a407b69516d9759f6d757 3b8ecde4bfa50a0372ddf32cc6d09b06858f417b 5934671919af4063499c34655cec63ab7706783b 5da5a80f50eaea6514b1398e13787c29e4e1c6e3 84a7ff9851dda955abe7489fb9f3b61e208be49a a39d73bd362253abe69b55494d8d04953b4174c1 a6c67105fe4da40e50f45a18d87fd4516ac25ef2 add6870d06968a753d16a33324eaa8bc5e138f14 bb351ec195837ba7d7367ff10575b80788f2fb96 c41aec8f6646053950ceb7fcfd07dc15c166f8fa d722b675fbc4889c78cab33d03f79075a65f5038 e34baf83d8a771aa6098e1103af6a71f1f503d5c e545b24f9b33aa4051da973385eb6d65bb7069bf eb6b5a2484c04f4773c5d28fe9e4e848097c2aab ff8847b86dbc757dc9dcd4a3efcebce4a26fd3a2
drwxr-xr-x root/root 0 2016-05-13 17:49 ./
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/0d/
-rw-r--r-- root/root 105536 2016-05-13 17:49 ./usr/lib/debug/.build-id/0d/781e48875b19ac023a407b69516d9759f6d757.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/3b/
-rw-r--r-- root/root 207656 2016-05-13 17:49 ./usr/lib/debug/.build-id/3b/8ecde4bfa50a0372ddf32cc6d09b06858f417b.debug
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drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/5d/
-rw-r--r-- root/root 214016 2016-05-13 17:49 ./usr/lib/debug/.build-id/5d/a5a80f50eaea6514b1398e13787c29e4e1c6e3.debug
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-rw-r--r-- root/root 207840 2016-05-13 17:49 ./usr/lib/debug/.build-id/84/a7ff9851dda955abe7489fb9f3b61e208be49a.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/a3/
-rw-r--r-- root/root 506920 2016-05-13 17:49 ./usr/lib/debug/.build-id/a3/9d73bd362253abe69b55494d8d04953b4174c1.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/a6/
-rw-r--r-- root/root 385068 2016-05-13 17:49 ./usr/lib/debug/.build-id/a6/c67105fe4da40e50f45a18d87fd4516ac25ef2.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/ad/
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drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/c4/
-rw-r--r-- root/root 354620 2016-05-13 17:49 ./usr/lib/debug/.build-id/c4/1aec8f6646053950ceb7fcfd07dc15c166f8fa.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/d7/
-rw-r--r-- root/root 362680 2016-05-13 17:49 ./usr/lib/debug/.build-id/d7/22b675fbc4889c78cab33d03f79075a65f5038.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/e3/
-rw-r--r-- root/root 86860 2016-05-13 17:49 ./usr/lib/debug/.build-id/e3/4baf83d8a771aa6098e1103af6a71f1f503d5c.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/e5/
-rw-r--r-- root/root 111128 2016-05-13 17:49 ./usr/lib/debug/.build-id/e5/45b24f9b33aa4051da973385eb6d65bb7069bf.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/eb/
-rw-r--r-- root/root 147564 2016-05-13 17:49 ./usr/lib/debug/.build-id/eb/6b5a2484c04f4773c5d28fe9e4e848097c2aab.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/debug/.build-id/ff/
-rw-r--r-- root/root 85696 2016-05-13 17:49 ./usr/lib/debug/.build-id/ff/8847b86dbc757dc9dcd4a3efcebce4a26fd3a2.debug
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-05-13 17:49 ./usr/share/doc/macs-dbgsym -> macs
macs_2.1.1.20160309-1+b1_armhf.deb
----------------------------------
new debian package, version 2.0.
size 1102656 bytes: control archive=2999 bytes.
1035 bytes, 19 lines control
5563 bytes, 63 lines md5sums
154 bytes, 9 lines * postinst #!/bin/sh
245 bytes, 14 lines * prerm #!/bin/sh
Package: macs
Source: macs (2.1.1.20160309-1)
Version: 2.1.1.20160309-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 4334
Depends: cython, python (<< 2.8), python (>= 2.7~), python-numpy, python:any (<< 2.8), python:any (>= 2.7.5-5~), libc6 (>= 2.15)
Section: science
Priority: optional
Homepage: http://github.com/taoliu/MACS/
Description: Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
drwxr-xr-x root/root 0 2016-05-13 17:49 ./
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/bin/
-rwxr-xr-x root/root 59860 2016-05-13 17:49 ./usr/bin/macs2
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/python2.7/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/python2.7/dist-packages/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/lib/python2.7/dist-packages/MACS2-2.1.1.20160309.egg-info/
-rw-r--r-- root/root 673 2016-05-13 17:49 ./usr/lib/python2.7/dist-packages/MACS2-2.1.1.20160309.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2016-05-13 17:49 ./usr/lib/python2.7/dist-packages/MACS2-2.1.1.20160309.egg-info/dependency_links.txt
-rw-r--r-- root/root 0 2016-05-13 17:49 ./usr/lib/python2.7/dist-packages/MACS2-2.1.1.20160309.egg-info/requires.txt
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drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/doc/
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drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/man/
drwxr-xr-x root/root 0 2016-05-13 17:49 ./usr/share/man/man1/
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+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 60320
Build-Time: 1701
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 647
Job: macs_2.1.1.20160309-1
Machine Architecture: armhf
Package: macs
Package-Time: 2407
Source-Version: 2.1.1.20160309-1
Space: 60320
Status: successful
Version: 2.1.1.20160309-1+b1
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Finished at 2017-10-28T22:43:48Z
Build needed 00:40:07, 60320k disc space