libtfbs-perl →
0.5.svn.20100421-1+b2 →
armhf → 2014-09-02 00:11:43
sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on bm-wb-02
╔══════════════════════════════════════════════════════════════════════════════╗
║ libtfbs-perl 0.5.svn.20100421-1+b2 (armhf) 02 Sep 2014 00:02 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: libtfbs-perl
Version: 0.5.svn.20100421-1+b2
Source Version: 0.5.svn.20100421-1
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/libtfbs-perl-DqRS0G/libtfbs-perl-0.5.svn.20100421' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/libtfbs-perl-DqRS0G' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-4a2448df-ce27-4b12-995c-697f5ec52da0' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
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Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [7510 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8583 kB]
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NOTICE: 'libtfbs-perl' packaging is maintained in the 'Svn' version control system at:
svn://svn.debian.org/debian-med/trunk/packages/libtfbs-perl/trunk/
Need to get 150 kB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main libtfbs-perl 0.5.svn.20100421-1 (dsc) [2081 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main libtfbs-perl 0.5.svn.20100421-1 (tar) [145 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main libtfbs-perl 0.5.svn.20100421-1 (diff) [3443 B]
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-U1vgno/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
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Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
init-system-helpers
Use 'apt-get autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 25 not upgraded.
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Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), perl, pdl, bioperl, libwww-perl, libdbi-perl
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), perl, pdl, bioperl, libwww-perl, libdbi-perl
dpkg-deb: building package `sbuild-build-depends-libtfbs-perl-dummy' in `/«BUILDDIR»/resolver-aMTqcr/apt_archive/sbuild-build-depends-libtfbs-perl-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install libtfbs-perl build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
init-system-helpers
Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
bioperl bsdmainutils ca-certificates debhelper file fontconfig-config
fonts-dejavu-core gettext gettext-base groff-base intltool-debian
libasprintf0c2 libbio-perl-perl libcroco3 libdata-stag-perl libdbi-perl
libencode-locale-perl libexpat1 libffi6 libfile-listing-perl libfontconfig1
libfreetype6 libgd3 libgfortran3 libglib2.0-0 libgsl0ldbl libhdf4-0-alt
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl
libio-string-perl libjbig0 libjpeg8 liblwp-mediatypes-perl
liblwp-protocol-https-perl libmagic1 libnet-http-perl libnet-ssleay-perl
libpipeline1 libproj0 libssl1.0.0 libterm-readkey-perl libtiff5
libunistring0 liburi-perl libvpx1 libwww-perl libwww-robotrules-perl
libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 man-db
netbase openssl pdl po-debconf proj-data ucf
Suggested packages:
wamerican wordlist whois vacation dh-make gettext-doc groff
libxml-sax-expatxs-perl libnet-daemon-perl libsql-statement-perl libgd-tools
gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libhdf4-doc
libhdf4-alt-dev hdf4-tools libnetcdf4 libdata-dump-perl libcrypt-ssleay-perl
proj-bin libauthen-ntlm-perl less www-browser libpgplot-perl netpbm
imagemagick libastro-fits-header-perl libinline-perl doc-base
libextutils-f77-perl libdevel-repl-perl libopengl-perl libgl1-mesa-glx
libgl1 libpdl-fftw-perl libpdl-graphics-plplot-perl libmail-box-perl
Recommended packages:
bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libgd-gd2-perl
libapache-dbi-perl libxml-simple-perl libyaml-perl libace-perl
liblist-moreutils-perl libxml-twig-perl libset-scalar-perl curl wget
lynx-cur autopoint libasprintf-dev libgettextpo-dev
libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
libclone-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl
libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl
libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl
libsort-naturally-perl libspreadsheet-parseexcel-perl
libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl
libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl
libxml-sax-writer-perl libxml-writer-perl libxml-libxml-perl perl-tk
libxml-libxslt-perl libmldbm-perl libglib2.0-data shared-mime-info
libhtml-format-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl
xml-core ifupdown libterm-readline-gnu-perl libterm-readline-perl-perl
libmail-sendmail-perl
The following NEW packages will be installed:
bioperl bsdmainutils ca-certificates debhelper file fontconfig-config
fonts-dejavu-core gettext gettext-base groff-base intltool-debian
libasprintf0c2 libbio-perl-perl libcroco3 libdata-stag-perl libdbi-perl
libencode-locale-perl libexpat1 libffi6 libfile-listing-perl libfontconfig1
libfreetype6 libgd3 libgfortran3 libglib2.0-0 libgsl0ldbl libhdf4-0-alt
libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl
libio-string-perl libjbig0 libjpeg8 liblwp-mediatypes-perl
liblwp-protocol-https-perl libmagic1 libnet-http-perl libnet-ssleay-perl
libpipeline1 libproj0 libssl1.0.0 libterm-readkey-perl libtiff5
libunistring0 liburi-perl libvpx1 libwww-perl libwww-robotrules-perl
libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 man-db
netbase openssl pdl po-debconf proj-data
sbuild-build-depends-libtfbs-perl-dummy ucf
0 upgraded, 69 newly installed, 0 to remove and 25 not upgraded.
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Get:3 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-6 [962 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
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Get:6 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.19.2-1 [30.5 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.19-1 [232 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-4 [698 kB]
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Get:14 http://172.17.0.1/private/ jessie-staging/main ucf all 3.0030 [69.7 kB]
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Get:32 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.19-1 [57.7 kB]
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Get:34 http://172.17.0.1/private/ jessie-staging/main libio-string-perl all 1.08-3 [12.3 kB]
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Get:36 http://172.17.0.1/private/ jessie-staging/main libbio-perl-perl all 1.6.924-1 [4763 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main bioperl all 1.6.924-1 [419 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main openssl armhf 1.0.1i-2 [660 kB]
Get:39 http://172.17.0.1/private/ jessie-staging/main ca-certificates all 20140325 [193 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.19.2-1 [1160 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu3 [220 kB]
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Get:44 http://172.17.0.1/private/ jessie-staging/main libdbi-perl armhf 1.631-3+b1 [807 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main libencode-locale-perl all 1.03-1 [13.6 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main libhttp-date-perl all 6.02-1 [10.7 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main libfile-listing-perl all 6.04-1 [10.3 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main libgsl0ldbl armhf 1.16+dfsg-2 [653 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main liburi-perl all 1.64-1 [95.5 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main libhtml-tagset-perl all 3.20-2 [13.5 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main libhtml-parser-perl armhf 3.71-1+b4 [105 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main libhtml-tree-perl all 5.03-1 [210 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main libio-html-perl all 1.001-1 [17.6 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main liblwp-mediatypes-perl all 6.02-1 [22.1 kB]
Get:55 http://172.17.0.1/private/ jessie-staging/main libhttp-message-perl all 6.06-1 [80.1 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main libhttp-cookies-perl all 6.00-2 [23.5 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main libhttp-negotiate-perl all 6.00-2 [13.6 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main libnet-ssleay-perl armhf 1.65-1+b1 [259 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main libio-socket-ssl-perl all 1.997-2 [167 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main libnet-http-perl all 6.07-1 [24.8 kB]
Get:61 http://172.17.0.1/private/ jessie-staging/main libwww-robotrules-perl all 6.01-1 [14.3 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libwww-perl all 6.08-1 [194 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main liblwp-protocol-https-perl all 6.06-2 [9582 B]
Get:64 http://172.17.0.1/private/ jessie-staging/main proj-data armhf 4.8.0-5 [2098 kB]
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Get:66 http://172.17.0.1/private/ jessie-staging/main libterm-readkey-perl armhf 2.32-1+b2 [26.1 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main libhdf4-0-alt armhf 4.2r4-13+b1 [212 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main pdl armhf 1:2.007-2.1 [3705 kB]
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Unpacking libhdf4-0-alt (4.2r4-13+b1) ...
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Unpacking pdl (1:2.007-2.1) ...
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Preparing to unpack .../sbuild-build-depends-libtfbs-perl-dummy.deb ...
Unpacking sbuild-build-depends-libtfbs-perl-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.3.0-1) ...
Setting up libssl1.0.0:armhf (1.0.1i-2) ...
Setting up groff-base (1.22.2-6) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up man-db (2.6.7.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libasprintf0c2:armhf (0.19.2-1) ...
Setting up libmagic1:armhf (1:5.19-1) ...
Setting up libxml2:armhf (2.9.1+dfsg1-4) ...
Setting up libffi6:armhf (3.1-2) ...
Setting up libglib2.0-0:armhf (2.40.0-4) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.8-3) ...
Setting up libexpat1:armhf (2.1.0-6) ...
Setting up libfreetype6:armhf (2.5.2-1.1) ...
Setting up ucf (3.0030) ...
Setting up fonts-dejavu-core (2.34-1) ...
Setting up fontconfig-config (2.11.0-6) ...
Setting up libfontconfig1:armhf (2.11.0-6) ...
Setting up libjpeg8:armhf (8d1-1) ...
Setting up libjbig0:armhf (2.1-3) ...
Setting up libtiff5:armhf (4.0.3-9) ...
Setting up libvpx1:armhf (1.3.0-2+rpi1) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libxdmcp6:armhf (1:1.1.1-1) ...
Setting up libxcb1:armhf (1.10-3) ...
Setting up libx11-data (2:1.6.2-3) ...
Setting up libx11-6:armhf (2:1.6.2-3) ...
Setting up libxpm4:armhf (1:3.5.11-1) ...
Setting up libgd3:armhf (2.1.0-4) ...
Setting up libgfortran3:armhf (4.9.1-4) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up netbase (5.2) ...
Setting up file (1:5.19-1) ...
Setting up gettext-base (0.19.2-1) ...
Setting up libio-string-perl (1.08-3) ...
Setting up libdata-stag-perl (0.13-1) ...
Setting up libbio-perl-perl (1.6.924-1) ...
Setting up bioperl (1.6.924-1) ...
Setting up openssl (1.0.1i-2) ...
Setting up ca-certificates (20140325) ...
Setting up gettext (0.19.2-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu3) ...
Setting up debhelper (9.20140817) ...
Setting up libdbi-perl (1.631-3+b1) ...
Setting up libencode-locale-perl (1.03-1) ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up libgsl0ldbl (1.16+dfsg-2) ...
Setting up liburi-perl (1.64-1) ...
Setting up libhtml-tagset-perl (3.20-2) ...
Setting up libhtml-parser-perl (3.71-1+b4) ...
Setting up libhtml-tree-perl (5.03-1) ...
Setting up libio-html-perl (1.001-1) ...
Setting up liblwp-mediatypes-perl (6.02-1) ...
Setting up libhttp-message-perl (6.06-1) ...
Setting up libhttp-cookies-perl (6.00-2) ...
Setting up libhttp-negotiate-perl (6.00-2) ...
Setting up libnet-ssleay-perl (1.65-1+b1) ...
Setting up libio-socket-ssl-perl (1.997-2) ...
Setting up libnet-http-perl (6.07-1) ...
Setting up libwww-robotrules-perl (6.01-1) ...
Setting up proj-data (4.8.0-5) ...
Setting up libproj0 (4.8.0-5) ...
Setting up libterm-readkey-perl (2.32-1+b2) ...
Setting up libhdf4-0-alt (4.2r4-13+b1) ...
Setting up pdl (1:2.007-2.1) ...
Setting up libwww-perl (6.08-1) ...
Setting up liblwp-protocol-https-perl (6.06-2) ...
Setting up sbuild-build-depends-libtfbs-perl-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-7) ...
Processing triggers for ca-certificates (20140325) ...
Updating certificates in /etc/ssl/certs... 168 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d....done.
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.16-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.24.51.20140727-1 dpkg-dev_1.17.10 g++-4.9_4.9.1-4 gcc-4.8_4.8.3-7 gcc-4.9_4.9.1-4 libc6-dev_2.19-7 libstdc++-4.9-dev_4.9.1-4 libstdc++6_4.9.1-4 linux-libc-dev_3.14.4-1+rpi1
Package versions: apt_1.0.6 base-files_7.5+rpi1 base-passwd_3.5.33 bash_4.3-8 binutils_2.24.51.20140727-1 bioperl_1.6.924-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.8 build-essential_11.6 bzip2_1.0.6-7 ca-certificates_20140325 coreutils_8.21-1.2 cpio_2.11+dfsg-2 cpp_4:4.9.1-1 cpp-4.8_4.8.3-7 cpp-4.9_4.9.1-4 dash_0.5.7-4 debconf_1.5.53 debfoster_2.7-2 debhelper_9.20140817 debianutils_4.4 diffutils_1:3.3-1 dpkg_1.17.10 dpkg-dev_1.17.10 e2fslibs_1.42.11-2 e2fsprogs_1.42.11-2 fakeroot_1.20.1-1.1 file_1:5.19-1 findutils_4.4.2-9 fontconfig-config_2.11.0-6 fonts-dejavu-core_2.34-1 g++_4:4.9.1-1 g++-4.9_4.9.1-4 gcc_4:4.9.1-1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8_4.8.3-7 gcc-4.8-base_4.8.3-7 gcc-4.9_4.9.1-4 gcc-4.9-base_4.9.1-4 gettext_0.19.2-1 gettext-base_0.19.2-1 gnupg_1.4.18-2 gpgv_1.4.18-2 grep_2.20-2 groff-base_1.22.2-6 gzip_1.6-3 hostname_3.15 init_1.21 init-system-helpers_1.21 initramfs-tools_0.115 initscripts_2.88dsf-53.3 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.3-1+rpi1 kmod_18-1 libacl1_2.2.52-1 libapt-pkg4.12_1.0.6 libasan0_4.8.3-7 libasan1_4.9.1-4 libasprintf0c2_0.19.2-1 libatomic1_4.9.1-4 libattr1_1:2.4.47-1 libaudit-common_1:2.3.7-1 libaudit1_1:2.3.7-1 libbio-perl-perl_1.6.924-1 libblkid1_2.20.1-5.8 libbz2-1.0_1.0.6-7 libc-bin_2.19-7 libc-dev-bin_2.19-7 libc6_2.19-7 libc6-dev_2.19-7 libcap2_1:2.24-4 libcgi-pm-perl_3.65-1 libcloog-isl4_0.18.2-1 libcomerr2_1.42.11-2 libcroco3_0.6.8-3 libdata-stag-perl_0.13-1 libdb5.1_5.1.29-6 libdb5.3_5.3.28-6 libdbi-perl_1.631-3+b1 libdbus-1-3_1.8.6-2 libdebconfclient0_0.191 libdpkg-perl_1.17.10 libdrm2_2.4.56-1 libencode-locale-perl_1.03-1 libexpat1_2.1.0-6 libfakeroot_1.20.1-1.1 libffi6_3.1-2 libfile-listing-perl_6.04-1 libfontconfig1_2.11.0-6 libfreetype6_2.5.2-1.1 libgc1c2_1:7.2d-6.3 libgcc-4.8-dev_4.8.3-7 libgcc-4.9-dev_4.9.1-4 libgcc1_1:4.9.1-4 libgd3_2.1.0-4 libgdbm3_1.8.3-13 libgfortran3_4.9.1-4 libglib2.0-0_2.40.0-4 libgmp10_2:6.0.0+dfsg-4+rpi1 libgomp1_4.9.1-4 libgsl0ldbl_1.16+dfsg-2 libhdf4-0-alt_4.2r4-13+b1 libhtml-parser-perl_3.71-1+b4 libhtml-tagset-perl_3.20-2 libhtml-tree-perl_5.03-1 libhttp-cookies-perl_6.00-2 libhttp-date-perl_6.02-1 libhttp-message-perl_6.06-1 libhttp-negotiate-perl_6.00-2 libio-html-perl_1.001-1 libio-socket-ssl-perl_1.997-2 libio-string-perl_1.08-3 libisl10_0.12.2-2 libjbig0_2.1-3 libjpeg8_8d1-1 libklibc_2.0.3-1+rpi1 libkmod2_18-1 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.06-2 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.19-1 libmodule-build-perl_0.420800-1 libmodule-signature-perl_0.73-1 libmount1_2.20.1-5.8 libmpc3_1.0.2-1 libmpfr4_3.1.2-1 libncurses5_5.9+20140712-2 libncursesw5_5.9+20140712-2 libnet-http-perl_6.07-1 libnet-ssleay-perl_1.65-1+b1 libpackage-constants-perl_0.04-1 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_1:8.35-3 libpipeline1_1.3.0-1 libpng12-0_1.2.50-2 libpod-readme-perl_0.11-1 libprocps0_1:3.3.4-2 libprocps3_1:3.3.9-7 libproj0_4.8.0-5 libreadline6_6.3-8 libregexp-common-perl_2013031301-1 libselinux1_2.3-1 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-1 libslang2_2.2.4-17 libss2_1.42.11-2 libssl1.0.0_1.0.1i-2 libstdc++-4.9-dev_4.9.1-4 libstdc++6_4.9.1-4 libterm-readkey-perl_2.32-1+b2 libtiff5_4.0.3-9 libtimedate-perl_2.3000-2 libtinfo5_5.9+20140712-2 libubsan0_4.9.1-4 libudev1_208-6 libunistring0_0.9.3-5.2 liburi-perl_1.64-1 libusb-0.1-4_2:0.1.12-24 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.8 libvpx1_1.3.0-2+rpi1 libwww-perl_6.08-1 libwww-robotrules-perl_6.01-1 libx11-6_2:1.6.2-3 libx11-data_2:1.6.2-3 libxau6_1:1.0.8-1 libxcb1_1.10-3 libxdmcp6_1:1.1.1-1 libxml2_2.9.1+dfsg1-4 libxpm4_1:3.5.11-1 linux-libc-dev_3.14.4-1+rpi1 login_1:4.2-2 lsb-base_4.1+Debian13+rpi1 make_4.0-8 makedev_2.3.1-93 man-db_2.6.7.1-1 mawk_1.3.3-17 mount_2.20.1-5.8 multiarch-support_2.19-7 nano_2.2.6-3 ncurses-base_5.9+20140712-2 ncurses-bin_5.9+20140712-2 netbase_5.2 openssl_1.0.1i-2 passwd_1:4.2-2 patch_2.7.1-6 pdl_1:2.007-2.1 perl_5.20.0-4 perl-base_5.20.0-4 perl-modules_5.20.0-4 plymouth_0.9.0-6 po-debconf_1.0.16+nmu3 procps_1:3.3.9-7 proj-data_4.8.0-5 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libtfbs-perl-dummy_0.invalid.0 sed_4.2.2-4 sensible-utils_0.0.9 startpar_0.59-3 sysv-rc_2.88dsf-53.3 sysvinit_2.88dsf-53.3 sysvinit-core_2.88dsf-53.3 sysvinit-utils_2.88dsf-53.3 tar_1.27.1-2 tzdata_2014f-1 ucf_3.0030 udev_208-6 util-linux_2.20.1-5.8 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1+rpi1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Aug 25 04:19:21 2011 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./libtfbs-perl_0.5.svn.20100421-1.dsc
dpkg-source: info: extracting libtfbs-perl in libtfbs-perl-0.5.svn.20100421
dpkg-source: info: unpacking libtfbs-perl_0.5.svn.20100421.orig.tar.gz
dpkg-source: info: applying libtfbs-perl_0.5.svn.20100421-1.diff.gz
Check disc space
────────────────
Sufficient free space for build
Hack binNMU version
───────────────────
Created changelog entry for binNMU version 0.5.svn.20100421-1+b2
User Environment
────────────────
APT_CONFIG=/var/lib/sbuild/apt.conf
COLUMNS=80
CONSOLE=/dev/console
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INIT_VERSION=sysvinit-2.88
LC_ALL=POSIX
LINES=24
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PREVLEVEL=N
PWD=/
RUNLEVEL=2
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-4a2448df-ce27-4b12-995c-697f5ec52da0
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
init=/sbin/init
previous=N
rootmnt=/root
runlevel=2
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package libtfbs-perl
dpkg-buildpackage: source version 0.5.svn.20100421-1+b2
dpkg-buildpackage: source distribution jessie-staging
dpkg-source --before-build libtfbs-perl-0.5.svn.20100421
dpkg-buildpackage: host architecture armhf
dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file
fakeroot debian/rules clean
/bin/sh: 1: svn: not found
dh clean
dh_testdir
dh_auto_clean
dh_clean
debian/rules build-arch
/bin/sh: 1: svn: not found
dh build-arch
dh_testdir -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/«PKGBUILDDIR»'
/bin/sh: 1: svn: not found
echo "n" | perl Makefile.PL INSTALLDIRS=vendor
-------------------------------------------------
WARNING
-------------------------------------------------
GD.pm does not seem to be installed.
GD is reqired to produce "sequence logos" from
information content matrices. If you need this
functionality, please visit
http://stein.cshl.org/WWW/software/GD/
for information on obtaining and installing GD.
-------------------------------------------------
Do you have write access to a MySQL database server? [n] Checking if your kit is complete...
Warning: the following files are missing in your kit:
META.yml
t/10_Tools_SetOperations.t
Please inform the author.
Generating a Unix-style Makefile
Writing Makefile for TFBS::Ext::pwmsearch
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for TFBS
Writing MYMETA.yml and MYMETA.json
/usr/bin/make OPTIMIZE="-Wall -g -O2" LD_RUN_PATH=""
make[2]: Entering directory '/«PKGBUILDDIR»'
cp TFBS/PatternGen/Elph/Motif.pm blib/lib/TFBS/PatternGen/Elph/Motif.pm
cp TFBS/PatternGen.pm blib/lib/TFBS/PatternGen.pm
cp TFBS/DB.pm blib/lib/TFBS/DB.pm
cp TFBS/SitePair.pm blib/lib/TFBS/SitePair.pm
cp TFBS/PatternGen/Gibbs.pm blib/lib/TFBS/PatternGen/Gibbs.pm
cp TFBS/PatternGenI.pm blib/lib/TFBS/PatternGenI.pm
cp TFBS/DB/TRANSFAC.pm blib/lib/TFBS/DB/TRANSFAC.pm
cp TFBS/PatternGen/Motif/Matrix.pm blib/lib/TFBS/PatternGen/Motif/Matrix.pm
cp TFBS/Matrix.pm blib/lib/TFBS/Matrix.pm
cp TFBS/PatternGen/Elph.pm blib/lib/TFBS/PatternGen/Elph.pm
cp TFBS/SiteSet.pm blib/lib/TFBS/SiteSet.pm
cp TFBS/Tools/SetOperations.pm blib/lib/TFBS/Tools/SetOperations.pm
cp TFBS/ConservationProfile.pm blib/lib/TFBS/ConservationProfile.pm
cp TFBS/DB/JASPAR4.pm blib/lib/TFBS/DB/JASPAR4.pm
cp TFBS/PatternI.pm blib/lib/TFBS/PatternI.pm
cp TFBS/Word/Consensus.pm blib/lib/TFBS/Word/Consensus.pm
cp TFBS/PatternGen/Motif/Word.pm blib/lib/TFBS/PatternGen/Motif/Word.pm
cp TFBS/DB/JASPAR5.pm blib/lib/TFBS/DB/JASPAR5.pm
cp TFBS/DB/LocalTRANSFAC.pm blib/lib/TFBS/DB/LocalTRANSFAC.pm
cp TFBS/_Iterator/_SiteSetIterator.pm blib/lib/TFBS/_Iterator/_SiteSetIterator.pm
cp TFBS/PatternGen/MEME.pm blib/lib/TFBS/PatternGen/MEME.pm
cp TFBS/Matrix/PFM.pm blib/lib/TFBS/Matrix/PFM.pm
cp TFBS/PatternGen/AnnSpec.pm blib/lib/TFBS/PatternGen/AnnSpec.pm
cp TFBS/PatternGen/Gibbs/Motif.pm blib/lib/TFBS/PatternGen/Gibbs/Motif.pm
cp TFBS/PatternGen/AnnSpec/Motif.pm blib/lib/TFBS/PatternGen/AnnSpec/Motif.pm
cp TFBS/_Iterator.pm blib/lib/TFBS/_Iterator.pm
cp TFBS/_Iterator/_MatrixSetIterator.pm blib/lib/TFBS/_Iterator/_MatrixSetIterator.pm
cp TFBS/Run/ConservationProfileGenerator.pm blib/lib/TFBS/Run/ConservationProfileGenerator.pm
cp TFBS/DB/FlatFileDir.pm blib/lib/TFBS/DB/FlatFileDir.pm
cp TFBS/DB/JASPAR2.pm blib/lib/TFBS/DB/JASPAR2.pm
cp TFBS/SitePairSet.pm blib/lib/TFBS/SitePairSet.pm
cp TFBS/PatternGen/MEME/Motif.pm blib/lib/TFBS/PatternGen/MEME/Motif.pm
cp TFBS/Matrix/PWM.pm blib/lib/TFBS/Matrix/PWM.pm
cp TFBS/Matrix/ICM.pm blib/lib/TFBS/Matrix/ICM.pm
cp TFBS/PatternGen/SimplePFM.pm blib/lib/TFBS/PatternGen/SimplePFM.pm
cp TFBS/PatternGen/YMF.pm blib/lib/TFBS/PatternGen/YMF.pm
cp TFBS/Word.pm blib/lib/TFBS/Word.pm
cp TFBS/Matrix/Alignment.pm blib/lib/TFBS/Matrix/Alignment.pm
cp TFBS/PatternGen/YMF/Motif.pm blib/lib/TFBS/PatternGen/YMF/Motif.pm
cp TFBS/MatrixSet.pm blib/lib/TFBS/MatrixSet.pm
cp TFBS/Matrix/_Alignment.pm blib/lib/TFBS/Matrix/_Alignment.pm
cp TFBS/Site.pm blib/lib/TFBS/Site.pm
make[3]: Entering directory '/«PKGBUILDDIR»/Ext'
cp lib/pwm_searchPFF.c ../blib/lib/pwm_searchPFF.c
cp pwmsearch.pm ../blib/lib/TFBS/Ext/pwmsearch.pm
cp lib/pwm_search.h ../blib/lib/pwm_search.h
Running Mkbootstrap for TFBS::Ext::pwmsearch ()
chmod 644 pwmsearch.bs
/usr/bin/perl /usr/share/perl/5.20.0/ExtUtils/xsubpp -typemap /usr/share/perl/5.20/ExtUtils/typemap pwmsearch.xs > pwmsearch.xsc && mv pwmsearch.xsc pwmsearch.c
Please specify prototyping behavior for pwmsearch.xs (see perlxs manual)
cc -c -I. -I./lib -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fstack-protector -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wall -g -O2 -DVERSION=\"0.2\" -DXS_VERSION=\"0.2\" -fPIC "-I/usr/lib/arm-linux-gnueabihf/perl/5.20/CORE" pwmsearch.c
In file included from pwmsearch.xs:4:0:
./lib/pwm_searchPFF.c: In function 'do_search':
./lib/pwm_searchPFF.c:55:7: warning: implicit declaration of function 'announce' [-Wimplicit-function-declaration]
announce("+++\nEntering main.\n+++\n");
^
./lib/pwm_searchPFF.c:74:4: warning: implicit declaration of function 'get_matrix' [-Wimplicit-function-declaration]
if ( get_matrix(&args,pwm) )
^
./lib/pwm_searchPFF.c:90:4: warning: implicit declaration of function 'loop_on_seqs' [-Wimplicit-function-declaration]
else if ( loop_on_seqs(&args,pwm,fp,outfp) )
^
./lib/pwm_searchPFF.c: At top level:
./lib/pwm_searchPFF.c:159:1: warning: return type defaults to 'int' [-Wreturn-type]
best_pull(pargs,pbase,pstrand,pscore)
^
./lib/pwm_searchPFF.c: In function 'do_seq':
./lib/pwm_searchPFF.c:220:10: warning: array subscript has type 'char' [-Wchar-subscripts]
nt = TRANS[seq[base+pos]];
^
./lib/pwm_searchPFF.c:229:13: warning: implicit declaration of function 'save_hit' [-Wimplicit-function-declaration]
if ( save_hit(base,0,forward_score,hits,&nhit) )
^
./lib/pwm_searchPFF.c:239:10: warning: implicit declaration of function 'output' [-Wimplicit-function-declaration]
else if ( output(pargs,seqid,base,seq,0,forward_score,outfp) )
^
./lib/pwm_searchPFF.c: In function 'get_matrix':
./lib/pwm_searchPFF.c:436:11: warning: unused variable 'counts' [-Wunused-variable]
double counts[2*MAXCOUNTS];
^
./lib/pwm_searchPFF.c: At top level:
./lib/pwm_searchPFF.c:526:1: warning: return type defaults to 'int' [-Wreturn-type]
get_sequence(fp,seq_id,sequence)
^
In file included from pwmsearch.xs:3:0:
pwmsearch.c: In function 'XS_TFBS__Ext__pwmsearch_search_xs':
/usr/lib/arm-linux-gnueabihf/perl/5.20/CORE/XSUB.h:175:28: warning: unused variable 'targ' [-Wunused-variable]
#define dXSTARG SV * const targ = ((PL_op->op_private & OPpENTERSUB_HASTARG) \
^
pwmsearch.c:181:2: note: in expansion of macro 'dXSTARG'
dXSTARG;
^
pwmsearch.c:180:6: warning: unused variable 'RETVAL' [-Wunused-variable]
int RETVAL;
^
In file included from ./lib/pwm_searchPFF.c:34:0,
from pwmsearch.xs:4:
pwmsearch.c: At top level:
./lib/pwm_search.h:39:13: warning: 'SQCOMP' defined but not used [-Wunused-variable]
static char SQCOMP[] = /* calculate base on complementary strand */
^
In file included from pwmsearch.xs:4:0:
./lib/pwm_searchPFF.c: In function 'mark':
./lib/pwm_searchPFF.c:693:1: warning: control reaches end of non-void function [-Wreturn-type]
}
^
./lib/pwm_searchPFF.c: In function 'do_search':
./lib/pwm_searchPFF.c:104:4: warning: 'outfp' may be used uninitialized in this function [-Wmaybe-uninitialized]
fclose(outfp);
^
./lib/pwm_searchPFF.c:103:4: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
fclose(fp);
^
rm -f ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so
cc -shared -L/usr/local/lib -fstack-protector pwmsearch.o -o ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so \
-lm \
chmod 755 ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so
/usr/bin/perl -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644
Manifying ../blib/man3/TFBS::Ext::pwmsearch.3pm
make[3]: Leaving directory '/«PKGBUILDDIR»/Ext'
Manifying blib/man3/TFBS::DB::FlatFileDir.3pm
Manifying blib/man3/TFBS::DB::JASPAR2.3pm
Manifying blib/man3/TFBS::DB::JASPAR4.3pm
Manifying blib/man3/TFBS::DB::JASPAR5.3pm
Manifying blib/man3/TFBS::DB::LocalTRANSFAC.3pm
Manifying blib/man3/TFBS::DB::TRANSFAC.3pm
Manifying blib/man3/TFBS::Matrix.3pm
Manifying blib/man3/TFBS::Matrix::Alignment.3pm
Manifying blib/man3/TFBS::Matrix::ICM.3pm
Manifying blib/man3/TFBS::Matrix::PFM.3pm
Manifying blib/man3/TFBS::Matrix::PWM.3pm
Manifying blib/man3/TFBS::MatrixSet.3pm
Manifying blib/man3/TFBS::PatternGen.3pm
Manifying blib/man3/TFBS::PatternGen::AnnSpec.3pm
Manifying blib/man3/TFBS::PatternGen::AnnSpec::Motif.3pm
Manifying blib/man3/TFBS::PatternGen::Elph.3pm
Manifying blib/man3/TFBS::PatternGen::Elph::Motif.3pm
Manifying blib/man3/TFBS::PatternGen::Gibbs.3pm
Manifying blib/man3/TFBS::PatternGen::Gibbs::Motif.3pm
Manifying blib/man3/TFBS::PatternGen::MEME.3pm
Manifying blib/man3/TFBS::PatternGen::MEME::Motif.3pm
Manifying blib/man3/TFBS::PatternGen::SimplePFM.3pm
Manifying blib/man3/TFBS::PatternGen::YMF.3pm
Manifying blib/man3/TFBS::PatternGen::YMF::Motif.3pm
Manifying blib/man3/TFBS::PatternI.3pm
Manifying blib/man3/TFBS::Site.3pm
Manifying blib/man3/TFBS::SitePair.3pm
Manifying blib/man3/TFBS::SitePairSet.3pm
Manifying blib/man3/TFBS::SiteSet.3pm
Manifying blib/man3/TFBS::Word.3pm
Manifying blib/man3/TFBS::Word::Consensus.3pm
make[2]: Leaving directory '/«PKGBUILDDIR»'
make[1]: Leaving directory '/«PKGBUILDDIR»'
dh_auto_build -a
make[1]: Entering directory '/«PKGBUILDDIR»'
make[2]: Entering directory '/«PKGBUILDDIR»/Ext'
Running Mkbootstrap for TFBS::Ext::pwmsearch ()
chmod 644 pwmsearch.bs
make[2]: Leaving directory '/«PKGBUILDDIR»/Ext'
make[1]: Leaving directory '/«PKGBUILDDIR»'
debian/rules override_dh_auto_test
make[1]: Entering directory '/«PKGBUILDDIR»'
/bin/sh: 1: svn: not found
prove --blib t/01_Matrix.t t/02_Search.t t/03_DB_FlatFileDir.t t/05_DB_JASPAR.t t/06_SimplePFM.t t/07_AnnSpec.t t/07_Elph.t t/07_Gibbs.t t/07_MEME.t t/08_DB_LocalTRANSFAC.t t/09_DB_SQL_mysql.t t/09_Word_Consensus.t Ext/t/*.t
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/01_Matrix.t ............ ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/02_Search.t ............ ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/03_DB_FlatFileDir.t .... ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/05_DB_JASPAR.t ......... ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/06_SimplePFM.t ......... ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/07_AnnSpec.t ........... ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/07_Elph.t .............. ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/07_Gibbs.t ............. ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/07_MEME.t .............. ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/08_DB_LocalTRANSFAC.t .. ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/09_DB_SQL_mysql.t ...... ok
Possible precedence issue with control flow operator at /«PKGBUILDDIR»/blib/lib/TFBS/Matrix/_Alignment.pm line 152, <DATA> line 207.
t/09_Word_Consensus.t .... ok
Ext/t/pwmsearch.t ........ ok
All tests successful.
Files=13, Tests=45, 31 wallclock secs ( 0.43 usr 0.05 sys + 29.14 cusr 1.12 csys = 30.74 CPU)
Result: PASS
make[1]: Leaving directory '/«PKGBUILDDIR»'
fakeroot debian/rules binary-arch
/bin/sh: 1: svn: not found
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make[1]: Entering directory '/«PKGBUILDDIR»'
make[2]: Entering directory '/«PKGBUILDDIR»/Ext'
make[2]: Leaving directory '/«PKGBUILDDIR»/Ext'
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/Ext/pwmsearch/pwmsearch.so
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/pwm_searchPFF.c
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/pwm_search.h
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SitePair.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGenI.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SiteSet.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/ConservationProfile.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternI.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SitePairSet.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Word.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/MatrixSet.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Site.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Gibbs.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Elph.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/MEME.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/AnnSpec.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/SimplePFM.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/YMF.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Elph/Motif.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Motif/Matrix.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Motif/Word.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Gibbs/Motif.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/AnnSpec/Motif.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/MEME/Motif.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/YMF/Motif.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/TRANSFAC.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR4.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR5.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/LocalTRANSFAC.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/FlatFileDir.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR2.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Tools/SetOperations.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Word/Consensus.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator/_SiteSetIterator.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator/_MatrixSetIterator.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/PFM.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/PWM.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/ICM.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/Alignment.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/_Alignment.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Run/ConservationProfileGenerator.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Ext/pwmsearch.pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR2.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR4.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR5.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::Alignment.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::ICM.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PFM.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PWM.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::MatrixSet.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternI.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Site.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePair.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePairSet.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::SiteSet.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word.3pm
Installing /«PKGBUILDDIR»/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word::Consensus.3pm
make[1]: Leaving directory '/«PKGBUILDDIR»'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_compress -a
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libtfbs-perl/usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/Ext/pwmsearch/pwmsearch.so was not linked against libm.so.6 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package libtfbs-perl: unused substitution variable ${misc:Pre-Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package `libtfbs-perl' in `../libtfbs-perl_0.5.svn.20100421-1+b2_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libtfbs-perl_0.5.svn.20100421-1+b2_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build libtfbs-perl-0.5.svn.20100421
dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20140902-0011
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
libtfbs-perl_0.5.svn.20100421-1+b2_armhf.changes:
─────────────────────────────────────────────────
Format: 1.8
Date: Thu, 25 Aug 2011 13:10:21 +0900
Source: libtfbs-perl (0.5.svn.20100421-1)
Binary: libtfbs-perl
Architecture: armhf
Version: 0.5.svn.20100421-1+b2
Distribution: jessie-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
libtfbs-perl - scanning DNA sequence with a position weight matrix
Changes:
libtfbs-perl (0.5.svn.20100421-1+b2) jessie-staging; urgency=low
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
1a0f1a097f74bdd28b09b941b512d4a49e8d8921 176048 libtfbs-perl_0.5.svn.20100421-1+b2_armhf.deb
Checksums-Sha256:
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Files:
4995e72196988740a6887c98a91838b1 176048 perl optional libtfbs-perl_0.5.svn.20100421-1+b2_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
libtfbs-perl_0.5.svn.20100421-1+b2_armhf.deb
────────────────────────────────────────────
new debian package, version 2.0.
size 176048 bytes: control archive=3507 bytes.
1189 bytes, 23 lines control
7325 bytes, 82 lines md5sums
Package: libtfbs-perl
Source: libtfbs-perl (0.5.svn.20100421-1)
Version: 0.5.svn.20100421-1+b2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 463
Depends: perl (>= 5.20.0-4), perlapi-5.20.0, libc6 (>= 2.4), pdl, bioperl, libwww-perl, libdbi-perl
Recommends: libgd-gd2-perl | libgd-gd2-noxpm-perl
Section: perl
Priority: optional
Homepage: http://tfbs.genereg.net
Description: scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
drwxr-xr-x root/root 0 2014-09-02 00:10 ./
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/
-rw-r--r-- root/root 7518 2008-04-24 11:36 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/TRANSFAC.pm
-rw-r--r-- root/root 22305 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR4.pm
-rw-r--r-- root/root 34994 2009-12-04 08:35 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR5.pm
-rw-r--r-- root/root 7635 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/LocalTRANSFAC.pm
-rw-r--r-- root/root 13667 2010-04-20 09:26 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/FlatFileDir.pm
-rw-r--r-- root/root 25420 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB/JASPAR2.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Ext/
-rw-r--r-- root/root 3800 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Ext/pwmsearch.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/
-rw-r--r-- root/root 16095 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/PFM.pm
-rw-r--r-- root/root 15504 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/PWM.pm
-rw-r--r-- root/root 32505 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/ICM.pm
-rw-r--r-- root/root 7240 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/Alignment.pm
-rw-r--r-- root/root 12027 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix/_Alignment.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/AnnSpec/
-rw-r--r-- root/root 1225 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/AnnSpec/Motif.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Elph/
-rw-r--r-- root/root 1147 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Elph/Motif.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Gibbs/
-rw-r--r-- root/root 2218 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Gibbs/Motif.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/MEME/
-rw-r--r-- root/root 1147 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/MEME/Motif.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Motif/
-rw-r--r-- root/root 1208 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Motif/Matrix.pm
-rw-r--r-- root/root 347 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Motif/Word.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/YMF/
-rw-r--r-- root/root 1152 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/YMF/Motif.pm
-rw-r--r-- root/root 8276 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Gibbs.pm
-rw-r--r-- root/root 8334 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/Elph.pm
-rw-r--r-- root/root 6159 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/MEME.pm
-rw-r--r-- root/root 6478 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/AnnSpec.pm
-rw-r--r-- root/root 3279 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/SimplePFM.pm
-rw-r--r-- root/root 5315 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen/YMF.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Run/
-rw-r--r-- root/root 5450 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Run/ConservationProfileGenerator.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Tools/
-rw-r--r-- root/root 5929 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Tools/SetOperations.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Word/
-rw-r--r-- root/root 6689 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Word/Consensus.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator/
-rw-r--r-- root/root 1371 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator/_SiteSetIterator.pm
-rw-r--r-- root/root 1514 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator/_MatrixSetIterator.pm
-rw-r--r-- root/root 4804 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGen.pm
-rw-r--r-- root/root 326 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/DB.pm
-rw-r--r-- root/root 1659 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SitePair.pm
-rw-r--r-- root/root 509 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternGenI.pm
-rw-r--r-- root/root 8613 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Matrix.pm
-rw-r--r-- root/root 6209 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SiteSet.pm
-rw-r--r-- root/root 4598 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/ConservationProfile.pm
-rw-r--r-- root/root 3088 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/PatternI.pm
-rw-r--r-- root/root 1543 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/_Iterator.pm
-rw-r--r-- root/root 6308 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/SitePairSet.pm
-rw-r--r-- root/root 2237 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Word.pm
-rw-r--r-- root/root 14080 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/MatrixSet.pm
-rw-r--r-- root/root 7704 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/TFBS/Site.pm
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/Ext/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/Ext/pwmsearch/
-rw-r--r-- root/root 11800 2014-09-02 00:10 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/auto/TFBS/Ext/pwmsearch/pwmsearch.so
-rw-r--r-- root/root 20581 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/pwm_searchPFF.c
-rw-r--r-- root/root 4988 2008-01-24 20:21 ./usr/lib/arm-linux-gnueabihf/perl5/5.20/pwm_search.h
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/share/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/share/man/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/share/man/man3/
-rw-r--r-- root/root 2088 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Ext::pwmsearch.3pm.gz
-rw-r--r-- root/root 3730 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::FlatFileDir.3pm.gz
-rw-r--r-- root/root 5972 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::JASPAR2.3pm.gz
-rw-r--r-- root/root 5536 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::JASPAR4.3pm.gz
-rw-r--r-- root/root 6081 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::JASPAR5.3pm.gz
-rw-r--r-- root/root 2941 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm.gz
-rw-r--r-- root/root 3054 2014-09-02 00:10 ./usr/share/man/man3/TFBS::DB::TRANSFAC.3pm.gz
-rw-r--r-- root/root 2809 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Matrix.3pm.gz
-rw-r--r-- root/root 3310 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Matrix::Alignment.3pm.gz
-rw-r--r-- root/root 4279 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Matrix::ICM.3pm.gz
-rw-r--r-- root/root 4982 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Matrix::PFM.3pm.gz
-rw-r--r-- root/root 4376 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Matrix::PWM.3pm.gz
-rw-r--r-- root/root 3854 2014-09-02 00:10 ./usr/share/man/man3/TFBS::MatrixSet.3pm.gz
-rw-r--r-- root/root 2293 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen.3pm.gz
-rw-r--r-- root/root 2679 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm.gz
-rw-r--r-- root/root 2151 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm.gz
-rw-r--r-- root/root 2743 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::Elph.3pm.gz
-rw-r--r-- root/root 2141 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm.gz
-rw-r--r-- root/root 2748 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm.gz
-rw-r--r-- root/root 2409 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm.gz
-rw-r--r-- root/root 2621 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::MEME.3pm.gz
-rw-r--r-- root/root 2135 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm.gz
-rw-r--r-- root/root 2434 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm.gz
-rw-r--r-- root/root 2624 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::YMF.3pm.gz
-rw-r--r-- root/root 2124 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm.gz
-rw-r--r-- root/root 2616 2014-09-02 00:10 ./usr/share/man/man3/TFBS::PatternI.3pm.gz
-rw-r--r-- root/root 3556 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Site.3pm.gz
-rw-r--r-- root/root 2122 2014-09-02 00:10 ./usr/share/man/man3/TFBS::SitePair.3pm.gz
-rw-r--r-- root/root 3019 2014-09-02 00:10 ./usr/share/man/man3/TFBS::SitePairSet.3pm.gz
-rw-r--r-- root/root 2983 2014-09-02 00:10 ./usr/share/man/man3/TFBS::SiteSet.3pm.gz
-rw-r--r-- root/root 2179 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Word.3pm.gz
-rw-r--r-- root/root 3044 2014-09-02 00:10 ./usr/share/man/man3/TFBS::Word::Consensus.3pm.gz
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/share/doc/
drwxr-xr-x root/root 0 2014-09-02 00:10 ./usr/share/doc/libtfbs-perl/
-rw-r--r-- root/root 653 2014-09-02 00:09 ./usr/share/doc/libtfbs-perl/README.Debian
-rw-r--r-- root/root 1034 2014-09-02 00:09 ./usr/share/doc/libtfbs-perl/copyright
-rw-r--r-- root/root 1189 2014-09-02 00:09 ./usr/share/doc/libtfbs-perl/changelog.Debian.gz
-rw-r--r-- root/root 926 2008-01-24 20:21 ./usr/share/doc/libtfbs-perl/changelog.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 2728
Build-Time: 76
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 408
Job: libtfbs-perl_0.5.svn.20100421-1
Machine Architecture: armhf
Package: libtfbs-perl
Package-Time: 534
Source-Version: 0.5.svn.20100421-1
Space: 2728
Status: successful
Version: 0.5.svn.20100421-1+b2
────────────────────────────────────────────────────────────────────────────────
Finished at 20140902-0011
Build needed 00:08:54, 2728k disc space