librostlab-blast →
1.0.1-8 →
armhf → 2017-06-26 05:09:36
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01
+==============================================================================+
| librostlab-blast 1.0.1-8 (armhf) Mon, 26 Jun 2017 04:41:30 +0000 |
+==============================================================================+
Package: librostlab-blast
Version: 1.0.1-8
Source Version: 1.0.1-8
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-e255db58-7478-42ef-859f-916ec0dcf0c1' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [9987 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [11.9 MB]
Fetched 21.9 MB in 24s (890 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'librostlab-blast' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/librostlab-blast.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/librostlab-blast.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 392 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-8 (dsc) [2420 B]
Get:2 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-8 (tar) [384 kB]
Get:3 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-8 (diff) [5332 B]
Fetched 392 kB in 0s (1327 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/librostlab-blast-dkRayv/librostlab-blast-1.0.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/librostlab-blast-dkRayv' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-VOcXQJ/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-VOcXQJ/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (2764 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-VOcXQJ/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 20 not upgraded.
Need to get 770 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [770 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 770 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12654 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), dh-autoreconf, d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra
Filtered Build-Depends: debhelper (>= 10), dh-autoreconf, d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra
dpkg-deb: building package 'sbuild-build-depends-librostlab-blast-dummy' in '/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive/sbuild-build-depends-librostlab-blast-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-librostlab-blast-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Sources [572 B]
Get:5 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Packages [657 B]
Fetched 2562 B in 0s (3371 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-VOcXQJ/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install librostlab-blast build dependencies (apt-based resolver)
----------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs
debhelper dh-autoreconf dh-strip-nondeterminism doxygen file flex fontconfig
fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
graphviz groff-base intltool-debian libann0 libarchive-zip-perl
libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbsd0
libcairo2 libcdt5 libcgraph6 libclang1-3.9 libcroco3 libcups2 libcupsimage2
libdatrie1 libedit2 libexpat1 libffi6 libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgnutls30 libgraphite2-3
libgs9 libgs9-common libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2
libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu57 libijs-0.35
libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6
libkrb5-3 libkrb5support0 liblcms2-2 libllvm3.9 libltdl7 libmagic-mgc
libmagic1 libnettle6 libnspr4 libnss3 libopenjp2-7 libp11-kit0
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpoppler64 libpotrace0
libptexenc1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib
librostlab3 librostlab3-dev libsigsegv2 libsm6 libssl1.1 libsynctex1
libtasn1-6 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5
libtimedate-perl libtool libunistring0 libwebp6 libx11-6 libx11-data
libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
libxdot4 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
libzzip-0-13 m4 man-db mime-support po-debconf poppler-data
preview-latex-style python python-minimal python2.7 python2.7-minimal
t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc
libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff cups-common
libgd-tools gnutls-bin krb5-doc krb5-user liblcms2-utils librostlab-doc
libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc less
www-browser libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho
| fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk
python2.7-doc binfmt-support gv | postscript-viewer perl-tk xpdf-reader
| pdf-viewer python-pygments libfile-which-perl
libspreadsheet-parseexcel-perl texlive-pstricks dot2tex prerex ruby-tcltk
| libtcltk-ruby gvfs-bin
Recommended packages:
libfl-dev curl | wget | lynx-cur fonts-liberation libcupsfilters1
libglib2.0-data shared-mime-info xdg-user-dirs fonts-droid-fallback
libgts-bin krb5-locales libltdl-dev xml-core libmail-sendmail-perl lmodern
ruby wish tex-gyre texlive-fonts-recommended-doc tipa texlive-latex-base-doc
texlive-generic-extra texlive-latex-extra-doc prosper
texlive-latex-recommended-doc ruby | ruby-interpreter texlive-pictures-doc
tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs
debhelper dh-autoreconf dh-strip-nondeterminism doxygen file flex fontconfig
fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
graphviz groff-base intltool-debian libann0 libarchive-zip-perl
libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbsd0
libcairo2 libcdt5 libcgraph6 libclang1-3.9 libcroco3 libcups2 libcupsimage2
libdatrie1 libedit2 libexpat1 libffi6 libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libgd3 libglib2.0-0 libgnutls30 libgraphite2-3
libgs9 libgs9-common libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2
libharfbuzz-icu0 libharfbuzz0b libhogweed4 libice6 libicu57 libijs-0.35
libjbig0 libjbig2dec0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkpathsea6
libkrb5-3 libkrb5support0 liblcms2-2 libllvm3.9 libltdl7 libmagic-mgc
libmagic1 libnettle6 libnspr4 libnss3 libopenjp2-7 libp11-kit0
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpathplan4 libpipeline1 libpixman-1-0 libpoppler64 libpotrace0
libptexenc1 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib
librostlab3 librostlab3-dev libsigsegv2 libsm6 libssl1.1 libsynctex1
libtasn1-6 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5
libtimedate-perl libtool libunistring0 libwebp6 libx11-6 libx11-data
libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
libxdot4 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
libzzip-0-13 m4 man-db mime-support po-debconf poppler-data
preview-latex-style python python-minimal python2.7 python2.7-minimal
sbuild-build-depends-librostlab-blast-dummy t1utils tex-common texlive-base
texlive-binaries texlive-fonts-recommended texlive-latex-base
texlive-latex-extra texlive-latex-recommended texlive-pictures ucf
x11-common xdg-utils
0 upgraded, 148 newly installed, 0 to remove and 20 not upgraded.
Need to get 131 MB of archives.
After this operation, 466 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-VOcXQJ/apt_archive ./ sbuild-build-depends-librostlab-blast-dummy 0.invalid.0 [854 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf flex armhf 2.6.1-1.3 [414 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.1-1 [65.2 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.6.3-3.2 [384 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0036 [70.2 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.11.0-6.7 [271 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.11.0-6.7 [313 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.11.0-6.7 [402 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.12-1 [129 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.4-3 [290 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.4-3 [683 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.7-8 [1451 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.13-2 [389 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.13-2 [1178 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.13-2 [40.5 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.60 [36.7 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libffi6 armhf 3.2.1-6 [18.7 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libssl1.1 armhf 1.1.0f-3 [1105 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.13-2 [1827 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.13-2 [285 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.13-2 [20.0 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.13-2 [154 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.3-2 [951 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.30-1 [222 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.30-1 [105 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.30-1 [63.4 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-2 [116 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20170329-1 [69.0 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libnettle6 armhf 3.3-1 [204 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libhogweed4 armhf 3.3-1 [126 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libp11-kit0 armhf 0.23.3-5 [94.6 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libtasn1-6 armhf 4.12-2 [46.0 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libgnutls30 armhf 3.5.8-6 [822 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.15-1 [57.9 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.15-1 [115 kB]
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Get:52 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-2.2 [806 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15-6 [733 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-2 [433 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libbison-dev armhf 2:3.0.4.dfsg-1 [433 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf bison armhf 2:3.0.4.dfsg-1 [744 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.80 [18.6 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
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Get:65 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.034-1 [10.5 kB]
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Get:69 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-2 [1434 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.2.5 [961 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libllvm3.9 armhf 1:3.9.1-7+rpi1 [9696 kB]
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Get:75 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-4 [3341 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-3 [4540 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libann0 armhf 1.1.2+doc-6 [22.2 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libcdt5 armhf 2.38.0-17 [56.9 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libcgraph6 armhf 2.38.0-17 [75.7 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.1-2 [109 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.8-2 [218 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libwebp6 armhf 0.5.2-1 [202 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libgd3 armhf 2.2.4-2 [113 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-1 [451 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.12-1 [104 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.12-1 [95.9 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.14.8-1 [688 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-2 [386 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.26-1 [166 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.10-4 [32.8 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.26-1 [49.3 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.40.5-1 [305 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.10-2 [71.8 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.4.2-1 [640 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.40.5-1 [201 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.40.5-1 [190 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libpathplan4 armhf 2.38.0-17 [60.2 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libxdot4 armhf 2.38.0-17 [54.4 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libgvc6 armhf 2.38.0-17 [537 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libgvpr2 armhf 2.38.0-17 [186 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b1 [31.2 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf graphviz armhf 2.38.0-17 [695 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.6.32-2 [118 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.6.32-2 [48.6 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.6.32-2 [51.3 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.3-2+rpi1 [277 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.3-2+rpi1 [122 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-12 [16.0 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.13-4.1 [52.6 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.8-4 [118 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7 armhf 2.1.2-1.1 [108 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.21~dfsg-1 [5164 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.21~dfsg-1 [1807 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 1.4.2-1 [465 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2017.20170613.44572-2 [151 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libnspr4 armhf 2:4.15-1 [95.5 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf libnss3 armhf 2:3.31-1 [944 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libpoppler64 armhf 0.48.0-2 [1163 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.14-2 [23.1 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2017.20170613.44572-2 [55.7 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf librostlab3 armhf 1.0.20-7 [6162 B]
Get:132 http://172.17.0.1/private buster-staging/main armhf librostlab3-dev armhf 1.0.20-7 [13.9 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libsynctex1 armhf 2017.20170613.44572-2 [58.3 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2017.20170613.44572-2 [85.8 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2017.20170613.44572-2 [201 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.06 [566 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.90-1 [200 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.39-2 [52.7 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2017.20170613.44572-2 [5858 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.1-1 [71.1 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2016.20170123-5 [15.8 MB]
Get:144 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2016.20170123-5 [5307 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2016.20170123-5 [861 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2016.20170123-5 [13.2 MB]
Get:147 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2016.20170123-5 [3908 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2016.20170123-5 [10.6 MB]
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
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update-language: texlive-base not installed and configured, doing nothing!
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Regenerating fonts cache... done.
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Setting up libcairo2:armhf (1.14.8-1) ...
Setting up libpangoft2-1.0-0:armhf (1.40.5-1) ...
Setting up libcupsimage2:armhf (2.2.3-2+rpi1) ...
Setting up libgs9:armhf (9.21~dfsg-1) ...
Setting up libpangocairo-1.0-0:armhf (1.40.5-1) ...
Setting up texlive-binaries (2017.20170613.44572-2) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libgvc6 (2.38.0-17) ...
Setting up graphviz (2.38.0-17) ...
Processing triggers for tex-common (6.06) ...
update-language: texlive-base not installed and configured, doing nothing!
texlive-base is not ready, skipping fmtutil --all call
Setting up texlive-base (2016.20170123-5) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Processing triggers for tex-common (6.06) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
Setting up texlive-latex-base (2016.20170123-5) ...
Setting up texlive-fonts-recommended (2016.20170123-5) ...
Processing triggers for tex-common (6.06) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
Setting up texlive-latex-recommended (2016.20170123-5) ...
Setting up texlive-pictures (2016.20170123-5) ...
Processing triggers for tex-common (6.06) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-extra (2016.20170123-5) ...
Processing triggers for tex-common (6.06) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up dh-autoreconf (14) ...
Setting up debhelper (10.2.5) ...
Setting up dh-strip-nondeterminism (0.034-1) ...
Setting up sbuild-build-depends-librostlab-blast-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-11+deb9u1) ...
Processing triggers for systemd (232-25) ...
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.28-5 dpkg-dev_1.18.24 g++-6_6.3.0-18+rpi1 gcc-6_6.3.0-18+rpi1 libc6-dev_2.24-11+deb9u1 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4.6 autoconf_2.69-10 automake_1:1.15-6 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_9.9+rpi1 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-5 bison_2:3.0.4.dfsg-1 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:6.3.0-4 cpp-6_6.3.0-18+rpi1 d-shlibs_0.80 dash_0.5.8-2.4 debconf_1.5.61 debhelper_10.2.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.034-1 diffutils_1:3.5-3 dmsetup_2:1.02.137-2 doxygen_1.8.13-4 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20161106-2 flex_2.6.1-1.3 fontconfig_2.11.0-6.7 fontconfig-config_2.11.0-6.7 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-3 g++_4:6.3.0-4 g++-6_6.3.0-18+rpi1 gcc_4:6.3.0-4 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-6_6.3.0-18+rpi1 gcc-6-base_6.3.0-18+rpi1 gettext_0.19.8.1-2 gettext-base_0.19.8.1-2 gnupg_2.1.18-6 gnupg-agent_2.1.18-6 gpgv_2.1.18-6 graphviz_2.38.0-17 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 init-system-helpers_1.48 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_23-2 libacl1_2.2.52-3 libann0_1.1.2+doc-6 libapparmor1_2.11.0-3 libapt-pkg5.0_1.4.6 libarchive-zip-perl_1.59-1 libasan3_6.3.0-18+rpi1 libassuan0_2.4.3-2 libatomic1_6.3.0-18+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.6.7-2 libaudit1_1:2.6.7-2 libavahi-client3_0.6.32-2 libavahi-common-data_0.6.32-2 libavahi-common3_0.6.32-2 libbison-dev_2:3.0.4.dfsg-1 libblkid1_2.29.2-1 libbsd0_0.8.3-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-11+deb9u1 libc-dev-bin_2.24-11+deb9u1 libc6_2.24-11+deb9u1 libc6-dev_2.24-11+deb9u1 libcairo2_1.14.8-1 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.3.0-18+rpi1 libcdt5_2.38.0-17 libcgraph6_2.38.0-17 libclang1-3.9_1:3.9.1-7+rpi1 libcomerr2_1.43.4-2 libcroco3_0.6.11-3 libcryptsetup4_2:1.7.3-4 libcups2_2.2.3-2+rpi1 libcupsimage2_2.2.3-2+rpi1 libdatrie1_0.2.10-4 libdb5.3_5.3.28-12 libdbus-1-3_1.10.18-1 libdebconfclient0_0.227 libdevmapper1.02.1_2:1.02.137-2 libdpkg-perl_1.18.24 libdrm2_2.4.74-1 libedit2_3.1-20170329-1 libexpat1_2.2.1-1 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.034-1 libfontconfig1_2.11.0-6.7 libfreetype6_2.6.3-3.2 libgcc-6-dev_6.3.0-18+rpi1 libgcc1_1:6.3.0-18+rpi1 libgcrypt20_1.7.6-2 libgd3_2.2.4-2 libgdbm3_1.8.3-14 libglib2.0-0_2.50.3-2 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-6 libgomp1_6.3.0-18+rpi1 libgpg-error0_1.26-2 libgraphite2-3_1.3.10-2 libgs9_9.21~dfsg-1 libgs9-common_9.21~dfsg-1 libgssapi-krb5-2_1.15-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.38.0-17 libgvpr2_2.38.0-17 libharfbuzz-icu0_1.4.2-1 libharfbuzz0b_1.4.2-1 libhogweed4_3.3-1 libice6_2:1.0.9-2 libicu57_57.1-6 libidn11_1.33-1 libijs-0.35_0.35-12 libip4tc0_1.6.0+snapshot20161117-6 libisl15_0.18-1 libjbig0_2.1-3.1 libjbig2dec0_0.13-4.1 libjpeg62-turbo_1:1.5.1-2 libk5crypto3_1.15-1 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_23-2 libkpathsea6_2017.20170613.44572-2 libkrb5-3_1.15-1 libkrb5support0_1.15-1 libksba8_1.3.5-2 liblcms2-2_2.8-4 libllvm3.9_1:3.9.1-7+rpi1 liblocale-gettext-perl_1.07-3+b1 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29.2-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.3-1 libnspr4_2:4.15-1 libnss3_2:3.31-1 libopenjp2-7_2.1.2-1.1 libp11-kit0_0.23.3-5 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpango-1.0-0_1.40.5-1 libpangocairo-1.0-0_1.40.5-1 libpangoft2-1.0-0_1.40.5-1 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpathplan4_2.38.0-17 libpcre3_2:8.39-3 libperl5.24_5.24.1-3 libpipeline1_1.4.1-2 libpixman-1-0_0.34.0-1 libplymouth4_0.9.2-4 libpng16-16_1.6.28-1 libpoppler64_0.48.0-2 libpotrace0_1.14-2 libprocps6_2:3.3.12-3 libptexenc1_2017.20170613.44572-2 libpython-stdlib_2.7.13-2 libpython2.7-minimal_2.7.13-2 libpython2.7-stdlib_2.7.13-2 libreadline7_7.0-3 librostlab3_1.0.20-7 librostlab3-dev_1.0.20-7 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.10-5 libsm6_2:1.2.2-1+b1 libsmartcols1_2.29.2-1 libsqlite3-0_3.16.2-5 libss2_1.43.4-2 libssl1.1_1.1.0f-3 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 libsynctex1_2017.20170613.44572-2 libsystemd0_232-25 libtasn1-6_4.12-2 libtexlua52_2017.20170613.44572-2 libtexluajit2_2017.20170613.44572-2 libtext-charwidth-perl_0.04-7+b7 libtext-iconv-perl_1.7-5+b8 libtext-wrapi18n-perl_0.06-7.1 libthai-data_0.1.26-1 libthai0_0.1.26-1 libtiff5_4.0.8-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libubsan0_6.3.0-18+rpi1 libudev1_232-25 libunistring0_0.9.6+really0.9.3-0.1 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libwebp6_0.5.2-1 libx11-6_2:1.6.4-3 libx11-data_2:1.6.4-3 libxapian30_1.4.3-2 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.12-1 libxcb-shm0_1.12-1 libxcb1_1.12-1 libxdmcp6_1:1.1.2-3 libxdot4_2.38.0-17 libxext6_2:1.3.3-1 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-2.2 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.4-4.1 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mime-support_3.60 mount_2.29.2-1 mountall_2.54 multiarch-support_2.24-11+deb9u1 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.24.1-3 perl-base_5.24.1-3 perl-modules-5.24_5.24.1-3 pinentry-curses_1.0.0-2 plymouth_0.9.2-4 po-debconf_1.0.20 poppler-data_0.4.7-8 preview-latex-style_11.90-1 procps_2:3.3.12-3 python_2.7.13-2 python-minimal_2.7.13-2 python2.7_2.7.13-2 python2.7-minimal_2.7.13-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librostlab-blast-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 systemd_232-25 sysvinit-utils_2.88dsf-59.9 t1utils_1.39-2 tar_1.29b-1.1 tex-common_6.06 texlive-base_2016.20170123-5 texlive-binaries_2017.20170613.44572-2 texlive-fonts-recommended_2016.20170123-5 texlive-latex-base_2016.20170123-5 texlive-latex-extra_2016.20170123-5 texlive-latex-recommended_2016.20170123-5 texlive-pictures_2016.20170123-5 tzdata_2017b-1 ucf_3.0036 udev_232-25 util-linux_2.29.2-1 x11-common_1:7.7+19 xdg-utils_1.1.1-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Jun 20 19:24:41 2017 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./librostlab-blast_1.0.1-8.dsc
dpkg-source: info: extracting librostlab-blast in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking librostlab-blast_1.0.1.orig.tar.gz
dpkg-source: info: unpacking librostlab-blast_1.0.1-8.debian.tar.xz
dpkg-source: info: applying reproducible.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-e255db58-7478-42ef-859f-916ec0dcf0c1
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package librostlab-blast
dpkg-buildpackage: info: source version 1.0.1-8
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build librostlab-blast-1.0.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with autoreconf
dh_testdir
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -f lib/librostlab-blast.tag
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean
dh_clean
debian/rules build-arch
dh build-arch --with autoreconf
dh_testdir -a
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:7: installing './compile'
configure.ac:5: installing './missing'
lib/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
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checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
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checking for inttypes.h... yes
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checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for bison... bison -y
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... none needed
checking whether yytext is a pointer... no
checking rostlab/aux_functions.h usability... yes
checking rostlab/aux_functions.h presence... yes
checking for rostlab/aux_functions.h... yes
checking rostlab/rostlab_stdexcept.h usability... yes
checking rostlab/rostlab_stdexcept.h presence... yes
checking for rostlab/rostlab_stdexcept.h... yes
checking for doxygen... /usr/bin/doxygen
checking for perl... /usr/bin/perl
checking for dot... /usr/bin/dot
checking for pdflatex... /usr/bin/pdflatex
checking for makeindex... /usr/bin/makeindex
checking for egrep... /bin/egrep
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating lib/Makefile
config.status: creating lib/Doxyfile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[3]: Entering directory '/<<PKGBUILDDIR>>'
Making all in lib
make[4]: Entering directory '/<<PKGBUILDDIR>>/lib'
mkdir -p rostlab
/bin/bash ../ylwrap blast-parser-scanner.lpp lex.yy.c blast-parser-scanner.cpp -- flex
/bin/bash ../ylwrap blast-parser-parser.ypp y.tab.c blast-parser-parser.cpp y.tab.h rostlab/blast-parser-parser.h y.output blast-parser-parser.output stack.hh rostlab/blast-parser-stack.h location.hh rostlab/blast-parser-location.h position.hh rostlab/blast-parser-position.h -- bison -y
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.9-17: warning: deprecated directive, use '%define api.namespace rostlab::blast' [-Wdeprecated]
%define namespace "rostlab::blast"
^^^^^^^^^
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.9-17: warning: %define variable 'api.namespace' requires '{...}' values [-Wdeprecated]
%define namespace "rostlab::blast"
^^^^^^^^^
updating rostlab/blast-parser-location.h
updating rostlab/blast-parser-position.h
updating rostlab/blast-parser-stack.h
updating rostlab/blast-parser-parser.h
sed -i -e 's,\by.tab.h\b,rostlab/blast-parser-parser.h,g' blast-parser-parser.cpp
sed -i -e 's,\bstack.hh\b,rostlab/blast-parser-stack.h,g;s,\blocation.hh\b,rostlab/blast-parser-location.h,g;' rostlab/blast-parser-parser.h
sed -i -e 's,\bposition.hh\b,rostlab/blast-parser-position.h,g;' rostlab/blast-parser-location.h
make all-am
make[5]: Entering directory '/<<PKGBUILDDIR>>/lib'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-driver.lo `test -f 'blast-parser-driver.cpp' || echo './'`blast-parser-driver.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-parser.lo `test -f 'blast-parser-parser.cpp' || echo './'`blast-parser-parser.cpp
\
\
/bin/bash ../ylwrap `test -f 'blast-parser-scanner.lpp' || echo './'`blast-parser-scanner.lpp lex.yy.c librostlab_blast_la-blast-parser-scanner.cpp -- flex -Cfe
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-parser.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-driver.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.lo `test -f 'librostlab_blast_la-blast-parser-scanner.cpp' || echo './'`librostlab_blast_la-blast-parser-scanner.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c librostlab_blast_la-blast-parser-scanner.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o
In file included from /usr/include/c++/6/vector:69:0,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:46:
/usr/include/c++/6/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::oneline; _Alloc = std::allocator<rostlab::blast::oneline>]':
/usr/include/c++/6/bits/vector.tcc:326:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::oneline>::iterator {aka __gnu_cxx::__normal_iterator<rostlab::blast::oneline*, std::vector<rostlab::blast::oneline> >}' will change in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::hsp; _Alloc = std::allocator<rostlab::blast::hsp>]':
/usr/include/c++/6/bits/vector.tcc:326:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::hsp>::iterator {aka __gnu_cxx::__normal_iterator<rostlab::blast::hsp*, std::vector<rostlab::blast::hsp> >}' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::parser::stack_symbol_type; _Alloc = std::allocator<rostlab::blast::parser::stack_symbol_type>]':
/usr/include/c++/6/bits/vector.tcc:326:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> >::iterator {aka __gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >}' will change in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -o librostlab_blast_la-blast-parser-driver.o >/dev/null 2>&1
librostlab_blast_la-blast-parser-scanner.cpp: In function 'int yy_get_next_buffer(yyscan_t)':
librostlab_blast_la-blast-parser-scanner.cpp:100419:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for ( n = 0; n < max_size && \
librostlab_blast_la-blast-parser-scanner.cpp:101274:3: note: in expansion of macro 'YY_INPUT'
YY_INPUT( (&YY_CURRENT_BUFFER_LVALUE->yy_ch_buf[number_to_move]),
^~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:46:
/usr/include/c++/6/bits/stl_vector.h: In member function 'virtual int rostlab::blast::parser::parse()':
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::oneline*, std::vector<rostlab::blast::oneline> >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::hsp*, std::vector<rostlab::blast::hsp> >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:926:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >' will change in GCC 7.1
_M_insert_aux(end(), __x);
^~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -o librostlab_blast_la-blast-parser-parser.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c librostlab_blast_la-blast-parser-scanner.cpp -o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -version-info 0:0:0 -Wall -Wl,-z,relro -Wl,-z,now -o librostlab-blast.la -rpath /usr/lib/arm-linux-gnueabihf librostlab_blast_la-blast-parser-driver.lo librostlab_blast_la-blast-parser-parser.lo librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.lo
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libtool: link: ar cru .libs/librostlab-blast.a librostlab_blast_la-blast-parser-driver.o librostlab_blast_la-blast-parser-parser.o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o
ar: `u' modifier ignored since `D' is the default (see `U')
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Chapter 1.
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Chapter 2.
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Chapter 3.
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Chapter 4.
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Chapter 5.
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Chapter 6.
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Chapter 7.
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(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [1] [2] [3] [4]
[5] [6] [7] [8] [9]) [10]
Chapter 1.
(./namespaces.tex) [1] [2]
Chapter 2.
(./hierarchy.tex) [3] [4]
Chapter 3.
(./annotated.tex) [5] [6]
Chapter 4.
(./files.tex) [7] [8]
Chapter 5.
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Chapter 6.
(./structrostlab_1_1blast_1_1parser_1_1basic__symbol.tex
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(./structrostlab_1_1blast_1_1result.tex [50] [51] [52] [53])
(./structrostlab_1_1blast_1_1round.tex [54] [55] [56])
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(./classrostlab_1_1blast_1_1slice.tex
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Chapter 7.
(./blast-parser-driver_8h.tex
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make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
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create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --with autoreconf
dh_testroot -a
dh_prep -a
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make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
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/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c librostlab-blast.la '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf'
/usr/bin/install -c -m 644 rostlab/blast-parser-location.h rostlab/blast-parser-parser.h rostlab/blast-parser-position.h rostlab/blast-parser-stack.h '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
/usr/bin/install -c -m 644 rostlab/blast-parser-driver.h rostlab/blast-result.h '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
libtool: install: /usr/bin/install -c .libs/librostlab-blast.so.0.0.0 /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab-blast.so.0.0.0 librostlab-blast.so.0 || { rm -f librostlab-blast.so.0 && ln -s librostlab-blast.so.0.0.0 librostlab-blast.so.0; }; })
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab-blast.so.0.0.0 librostlab-blast.so || { rm -f librostlab-blast.so && ln -s librostlab-blast.so.0.0.0 librostlab-blast.so; }; })
libtool: install: /usr/bin/install -c .libs/librostlab-blast.lai /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.la
libtool: install: /usr/bin/install -c .libs/librostlab-blast.a /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: install: chmod 644 /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: install: ranlib /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
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debian/rules override_dh_install
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d-shlibmove --commit \
--multiarch \
--exclude-la \
--v5 \
--movedev debian/tmp/usr/include/* usr/include \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
set -e
install -d -m 755 debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
PKGDEV=librostlab-blast0-dev
PKGSHL=librostlab-blast0v5
install -d -m 755 debian/librostlab-blast0-dev/usr/include
mv debian/tmp/usr/include/rostlab debian/librostlab-blast0-dev/usr/include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_installdocs
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dh_installdocs
find debian -name "*.md5" -delete
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dh_perl -a
debian/rules override_dh_link
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dh_link
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make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress -Xlibrostlab-blast.tag
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'librostlab-blast0-dev' in '../librostlab-blast0-dev_1.0.1-8_armhf.deb'.
dpkg-deb: building package 'librostlab-blast0v5-dbgsym' in '../librostlab-blast0v5-dbgsym_1.0.1-8_armhf.deb'.
dpkg-deb: building package 'librostlab-blast0v5' in '../librostlab-blast0v5_1.0.1-8_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../librostlab-blast_1.0.1-8_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build librostlab-blast-1.0.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-06-26T05:06:55Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
librostlab-blast_1.0.1-8_armhf.changes:
---------------------------------------
Format: 1.8
Date: Tue, 20 Jun 2017 21:15:32 +0200
Source: librostlab-blast
Binary: librostlab-blast0v5 librostlab-blast0-dev librostlab-blast-doc
Architecture: armhf
Version: 1.0.1-8
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
librostlab-blast-doc - very fast C++ library for parsing the output of NCBI BLAST progra
librostlab-blast0-dev - very fast C++ library for parsing the output of NCBI BLAST progra
librostlab-blast0v5 - very fast C++ library for parsing the output of NCBI BLAST progra
Closes: 865259
Changes:
librostlab-blast (1.0.1-8) unstable; urgency=medium
.
* Move packaging from SVN to Git
* debhelper 10
* d/watch: version=4
* drop -dbg package which is autogenerated
* update Build-Depends from latex-xcolor to texlive-latex-recommended
Closes: #865259
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Files:
836154b3f19b811895969f21a526c1ac 87908 libdevel optional librostlab-blast0-dev_1.0.1-8_armhf.deb
8c3ac6f63675e6770bf9b1bda9d59c93 302028 debug extra librostlab-blast0v5-dbgsym_1.0.1-8_armhf.deb
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f8c6614b15aabfcc1d3b7b4fdced921d 8658 science optional librostlab-blast_1.0.1-8_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
librostlab-blast0-dev_1.0.1-8_armhf.deb
---------------------------------------
new debian package, version 2.0.
size 87908 bytes: control archive=1147 bytes.
968 bytes, 24 lines control
1146 bytes, 14 lines md5sums
Package: librostlab-blast0-dev
Source: librostlab-blast
Version: 1.0.1-8
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1371
Depends: librostlab-blast0v5 (= 1.0.1-8), librostlab-dev
Suggests: librostlab-blast-doc
Conflicts: librostlab-blast-dev
Provides: librostlab-blast-dev
Section: libdevel
Priority: optional
Homepage: http://rostlab.org/
Description: very fast C++ library for parsing the output of NCBI BLAST programs (devel)
This package provides a very fast library for parsing the default output of
NCBI BLAST programs into a C++ structure.
.
libzerg is faster, but it provides only lexing (i.e. it only returns pairs
of token identifiers and token string values). librostlab-blast uses a
parser generated with bison on top of a flex-generated lexer very similar to
that of libzerg.
.
This package contains files necessary for developing applications with
librostlab-blast.
drwxr-xr-x root/root 0 2017-06-20 19:15 ./
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/include/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/include/rostlab/
-rw-r--r-- root/root 4174 2017-06-20 19:15 ./usr/include/rostlab/blast-parser-driver.h
-rw-r--r-- root/root 5479 2017-06-20 19:15 ./usr/include/rostlab/blast-parser-location.h
-rw-r--r-- root/root 15355 2017-06-20 19:15 ./usr/include/rostlab/blast-parser-parser.h
-rw-r--r-- root/root 5088 2017-06-20 19:15 ./usr/include/rostlab/blast-parser-position.h
-rw-r--r-- root/root 3787 2017-06-20 19:15 ./usr/include/rostlab/blast-parser-stack.h
-rw-r--r-- root/root 10413 2017-06-20 19:15 ./usr/include/rostlab/blast-result.h
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 1333818 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.a
lrwxrwxrwx root/root 0 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so -> librostlab-blast.so.0.0.0
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/
-rw-r--r-- root/root 820 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/README.test
-rw-r--r-- root/root 1157 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/changelog.Debian.gz
-rw-r--r-- root/root 210 2012-11-24 19:25 ./usr/share/doc/librostlab-blast0-dev/changelog.gz
-rw-r--r-- root/root 2024 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/copyright
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/examples/
-rw-r--r-- root/root 1580 2012-11-24 16:20 ./usr/share/doc/librostlab-blast0-dev/examples/converged.ali.gz
-rw-r--r-- root/root 324 2012-11-24 16:20 ./usr/share/doc/librostlab-blast0-dev/examples/parseblast.cpp
-rw-r--r-- root/root 676 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0-dev/installation-test
librostlab-blast0v5-dbgsym_1.0.1-8_armhf.deb
--------------------------------------------
new debian package, version 2.0.
size 302028 bytes: control archive=483 bytes.
442 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: librostlab-blast0v5-dbgsym
Source: librostlab-blast
Version: 1.0.1-8
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 321
Depends: librostlab-blast0v5 (= 1.0.1-8)
Section: debug
Priority: extra
Homepage: http://rostlab.org/
Description: Debug symbols for librostlab-blast0v5
Build-Ids: 8878bdc81fa819aa284cc01f62d134311253006f
drwxr-xr-x root/root 0 2017-06-20 19:15 ./
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/debug/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/debug/.build-id/88/
-rw-r--r-- root/root 318260 2017-06-20 19:15 ./usr/lib/debug/.build-id/88/78bdc81fa819aa284cc01f62d134311253006f.debug
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/
lrwxrwxrwx root/root 0 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0v5-dbgsym -> librostlab-blast0v5
librostlab-blast0v5_1.0.1-8_armhf.deb
-------------------------------------
new debian package, version 2.0.
size 74504 bytes: control archive=943 bytes.
877 bytes, 22 lines control
417 bytes, 5 lines md5sums
39 bytes, 1 lines shlibs
60 bytes, 2 lines triggers
Package: librostlab-blast0v5
Source: librostlab-blast
Version: 1.0.1-8
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1265
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
Conflicts: librostlab-blast0
Replaces: librostlab-blast0
Section: libs
Priority: optional
Homepage: http://rostlab.org/
Description: very fast C++ library for parsing the output of NCBI BLAST programs
This package provides a very fast library for parsing the default output of
NCBI BLAST programs into a C++ structure.
.
libzerg is faster, but it provides only lexing (i.e. it only returns pairs
of token identifiers and token string values). librostlab-blast uses a
parser generated with bison on top of a flex-generated lexer very similar to
that of libzerg.
.
This package contains the shared library.
drwxr-xr-x root/root 0 2017-06-20 19:15 ./
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0 -> librostlab-blast.so.0.0.0
-rw-r--r-- root/root 1275336 2017-06-20 19:15 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0v5/
-rw-r--r-- root/root 1157 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0v5/changelog.Debian.gz
-rw-r--r-- root/root 210 2012-11-24 19:25 ./usr/share/doc/librostlab-blast0v5/changelog.gz
-rw-r--r-- root/root 2024 2017-06-20 19:15 ./usr/share/doc/librostlab-blast0v5/copyright
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/lintian/
drwxr-xr-x root/root 0 2017-06-20 19:15 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 499 2017-06-20 19:15 ./usr/share/lintian/overrides/librostlab-blast0v5
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 27792
Build-Time: 276
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1202
Job: librostlab-blast_1.0.1-8
Machine Architecture: armhf
Package: librostlab-blast
Package-Time: 1525
Source-Version: 1.0.1-8
Space: 27792
Status: successful
Version: 1.0.1-8
--------------------------------------------------------------------------------
Finished at 2017-06-26T05:06:55Z
Build needed 00:25:25, 27792k disc space