librostlab-blast →
1.0.1-10 →
armhf → 2019-03-23 11:00:58
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on testwandboard
+==============================================================================+
| librostlab-blast 1.0.1-10 (armhf) Sat, 23 Mar 2019 10:35:49 +0000 |
+==============================================================================+
Package: librostlab-blast
Version: 1.0.1-10
Source Version: 1.0.1-10
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-2d4d355b-3a7c-4c4a-9597-582d6f775401' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.4 MB in 32s (773 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'librostlab-blast' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/librostlab-blast.git
Please use:
git clone https://salsa.debian.org/med-team/librostlab-blast.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 392 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-10 (dsc) [2389 B]
Get:2 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-10 (tar) [384 kB]
Get:3 http://172.17.0.1/private buster-staging/main librostlab-blast 1.0.1-10 (diff) [5280 B]
Fetched 392 kB in 0s (928 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/librostlab-blast-x6DGD3/librostlab-blast-1.0.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/librostlab-blast-x6DGD3' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-pu0uyU/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-pu0uyU/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-pu0uyU/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (3035 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 49 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (8378 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15903 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra
Filtered Build-Depends: debhelper (>= 11~), d-shlibs, bison, doxygen, flex, graphviz, texlive-latex-recommended, librostlab-dev, texlive-fonts-recommended, texlive-latex-extra
dpkg-deb: building package 'sbuild-build-depends-librostlab-blast-dummy' in '/<<BUILDDIR>>/resolver-pu0uyU/apt_archive/sbuild-build-depends-librostlab-blast-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-librostlab-blast-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Sources [564 B]
Get:5 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ Packages [644 B]
Fetched 2541 B in 1s (3705 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install librostlab-blast build dependencies (apt-based resolver)
----------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales
libgpg-error-l10n libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs
debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file flex
fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext
gettext-base graphviz groff-base intltool-debian libarchive-zip-perl
libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev
libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcroco3
libcups2 libcupsimage2 libdatrie1 libedit2 libelf1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgts-0.7-5 libgvc6
libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu63 libijs-0.35
libjbig0 libjbig2dec0 libjpeg62-turbo libkpathsea6 liblab-gamut1 liblcms2-2
libllvm6.0 libltdl7 libmagic-mgc libmagic1 libopenjp2-7 libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4
libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libpython-stdlib
libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib librostlab3
librostlab3-dev libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52
libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtool
libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxapian30 libxau6
libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6
libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4
man-db mime-support po-debconf poppler-data preview-latex-style python
python-minimal python2 python2-minimal python2.7 python2.7-minimal t1utils
tex-common texlive-base texlive-binaries texlive-fonts-recommended
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures ucf x11-common xdg-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui flex-doc
gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff
cups-common libgd-tools liblcms2-utils librostlab-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser
libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho
| fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk
python2-doc python2.7-doc binfmt-support gv | postscript-viewer perl-tk
xpdf-reader | pdf-viewer texlive-fonts-recommended-doc
texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl
libspreadsheet-parseexcel-perl texlive-latex-extra-doc
texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
| libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
libfl-dev curl | wget | lynx fonts-liberation libcupsfilters1
libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
fonts-droid-fallback libgts-bin libltdl-dev libmail-sendmail-perl lmodern
tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bison bsdmainutils d-shlibs
debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file flex
fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext
gettext-base graphviz groff-base intltool-debian libarchive-zip-perl
libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev
libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcroco3
libcups2 libcupsimage2 libdatrie1 libedit2 libelf1
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgd3 libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgts-0.7-5 libgvc6
libgvpr2 libharfbuzz-icu0 libharfbuzz0b libice6 libicu63 libijs-0.35
libjbig0 libjbig2dec0 libjpeg62-turbo libkpathsea6 liblab-gamut1 liblcms2-2
libllvm6.0 libltdl7 libmagic-mgc libmagic1 libopenjp2-7 libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4
libpipeline1 libpixman-1-0 libpotrace0 libptexenc1 libpython-stdlib
libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib librostlab3
librostlab3-dev libsigsegv2 libsm6 libsynctex2 libteckit0 libtexlua52
libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtool
libuchardet0 libwebp6 libwoff1 libx11-6 libx11-data libxapian30 libxau6
libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxdot4 libxext6
libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libxxhash0 libzzip-0-13 m4
man-db mime-support po-debconf poppler-data preview-latex-style python
python-minimal python2 python2-minimal python2.7 python2.7-minimal
sbuild-build-depends-librostlab-blast-dummy t1utils tex-common texlive-base
texlive-binaries texlive-fonts-recommended texlive-latex-base
texlive-latex-extra texlive-latex-recommended texlive-pictures ucf
x11-common xdg-utils
0 upgraded, 142 newly installed, 0 to remove and 49 not upgraded.
Need to get 140 MB/143 MB of archives.
After this operation, 508 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-pu0uyU/apt_archive ./ sbuild-build-depends-librostlab-blast-dummy 0.invalid.0 [928 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-2 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf flex armhf 2.6.4-6.2 [427 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.16~rc1-1 [394 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.16~rc1-1 [1090 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.15-4 [41.4 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15-4 [21.0 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.62 [37.2 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.16~rc1-1 [1844 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.16~rc1-1 [304 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.15-4 [20.8 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15-4 [20.8 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.15-4 [41.6 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15-4 [22.8 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.11 [53.1 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-4 [242 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-4 [110 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-4 [65.3 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libbison-dev armhf 2:3.3.2.dfsg-1 [500 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf bison armhf 2:3.3.2.dfsg-1 [829 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.84 [17.2 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.1-1 [13.0 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.176-1 [158 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-1 [1077 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf debhelper all 12.1.1 [1016 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20181209-1 [78.7 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libllvm6.0 armhf 1:6.0.1-10+rpi1 [12.5 MB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libclang1-6.0 armhf 1:6.0.1-10+rpi1 [5679 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.11-1 [959 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-10 [3257 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libcdt5 armhf 2.40.1-5+b2 [58.4 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libcgraph6 armhf 2.40.1-5+b2 [77.5 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-4 [236 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libgd3 armhf 2.2.5-5.1 [114 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-2 [170 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-2 [35.9 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-2 [50.9 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.13-7 [69.6 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.1-1 [1144 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libpathplan4 armhf 2.40.1-5+b2 [61.5 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libxdot4 armhf 2.40.1-5+b2 [55.8 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libgvc6 armhf 2.40.1-5+b2 [544 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libgvpr2 armhf 2.40.1-5+b2 [188 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf liblab-gamut1 armhf 2.40.1-5+b2 [221 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf graphviz armhf 2.40.1-5+b2 [497 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libbrotli1 armhf 1.0.7-2 [269 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.10-4 [286 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.10-4 [130 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.26a~dfsg-2 [5136 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.15-2 [53.3 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7 armhf 2.3.0-2 [138 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.26 [20.0 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.26a~dfsg-2 [1842 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.3.1-1 [833 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20181218.49446-1 [157 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.26 [17.5 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.15-1 [23.9 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20181218.49446-1 [58.2 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf librostlab3 armhf 1.0.20-8 [6212 B]
Get:111 http://172.17.0.1/private buster-staging/main armhf librostlab3-dev armhf 1.0.20-8 [13.7 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20181218.49446-1 [67.3 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20181218.49446-1 [86.9 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20181218.49446-1 [97.9 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20181218.49446-1 [204 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libxxhash0 armhf 0.6.5-2 [10.0 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20181218.49446-1 [7807 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20190227-2 [19.7 MB]
Get:125 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2018.20190227-2 [5228 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20190227-2 [984 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2018.20190227-2 [15.2 MB]
Get:128 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2018.20190227-2 [8201 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2018.20190227-1 [12.3 MB]
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
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Regenerating fonts cache... done.
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Not building database; man-db/auto-update is not 'true'.
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Setting up libcairo2:armhf (1.16.0-4) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
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update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
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Processing triggers for systemd (241-1+rpi1) ...
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Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.5 g++-8_8.2.0-21+rpi1 gcc-8_8.2.0-21+rpi1 libc6-dev_2.28-7+rpi1 libstdc++-8-dev_8.2.0-21+rpi1 libstdc++6_8.2.0-21+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bison_2:3.3.2.dfsg-1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20190110 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-21+rpi1 d-shlibs_0.84 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 debconf_1.5.70 debhelper_12.1.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.7-2 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-2 doxygen_1.8.13-10 dpkg_1.19.5 dpkg-dev_1.19.5 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 flex_2.6.4-6.2 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-21+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-21+rpi1 gcc-8-base_8.2.0-21+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 graphviz_2.40.1-5+b2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 inetutils-ping_2:1.9.4-7 init-system-helpers_1.56+nmu1 initramfs-tools_0.133 initramfs-tools-core_0.133 intltool-debian_0.35.0+20060710.5 klibc-utils_2.0.6-1+rpi1 kmod_26-1 krb5-locales_1.17-1 libacl1_2.2.52-5 libapparmor1_2.13.2-7 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libasan5_8.2.0-21+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-21+rpi1 libattr1_1:2.4.47-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-11+rpi1 libbison-dev_2:3.3.2.dfsg-1 libblkid1_2.33.1-0.1 libbrotli1_1.0.7-2 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-7+rpi1 libc-dev-bin_2.28-7+rpi1 libc6_2.28-7+rpi1 libc6-dev_2.28-7+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_8.2.0-21+rpi1 libcdt5_2.40.1-5+b2 libcgraph6_2.40.1-5+b2 libclang1-6.0_1:6.0.1-10+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.10-4 libcupsimage2_2.2.10-4 libdatrie1_0.2.12-2 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1 libdebconfclient0_0.247 libdevmapper1.02.1_2:1.02.155-2 libdpkg-perl_1.19.5 libdrm-common_2.4.97-1+rpi1 libdrm2_2.4.97-1+rpi1 libedit2_3.1-20181209-1 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.1-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3.1 libgcc-8-dev_8.2.0-21+rpi1 libgcc1_1:8.2.0-21+rpi1 libgcrypt20_1.8.4-5 libgd3_2.2.5-5.1 libgdbm-compat4_1.18.1-3 libgdbm3_1.8.3-14 libgdbm6_1.18.1-3 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-21+rpi1 libgpg-error-l10n_1.35-1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgs9_9.26a~dfsg-2 libgs9-common_9.26a~dfsg-2 libgssapi-krb5-2_1.17-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-5+b2 libgvpr2_2.40.1-5+b2 libharfbuzz-icu0_2.3.1-1 libharfbuzz0b_2.3.1-1 libhogweed4_3.4.1-1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjbig2dec0_0.15-2 libjpeg62-turbo_1:1.5.2-2+b1 libjson-c3_0.12.1+ds-2 libk5crypto3_1.17-1 libkeyutils1_1.6-2 libklibc_2.0.6-1+rpi1 libkmod2_26-1 libkpathsea6_2018.20181218.49446-1 libkrb5-3_1.17-1 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libptexenc1_2018.20181218.49446-1 libpython-stdlib_2.7.15-4 libpython2-stdlib_2.7.15-4 libpython2.7-minimal_2.7.16~rc1-1 libpython2.7-stdlib_2.7.16~rc1-1 libreadline7_7.0-5 librostlab3_1.0.20-8 librostlab3-dev_1.0.20-8 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-21+rpi1 libstdc++6_8.2.0-21+rpi1 libsynctex2_2018.20181218.49446-1 libsystemd0_241-1+rpi1 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181218.49446-1 libtexlua53_2018.20181218.49446-1 libtexluajit2_2018.20181218.49446-1 libthai-data_0.1.28-2 libthai0_0.1.28-2 libtiff5_4.0.10-4 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libubsan1_8.2.0-21+rpi1 libuchardet0_0.0.6-3 libudev1_241-1+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxapian30_1.4.11-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxdot4_2.40.1-5+b2 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libxxhash0_0.6.5-2 libzstd1_1.3.8+dfsg-3+rpi1 libzzip-0-13_0.13.62-3.2 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-2 mawk_1.3.3-17 mime-support_3.62 mount_2.33.1-0.1 multiarch-support_2.28-7+rpi1 nano_3.2-2 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-4 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 poppler-data_0.4.9-2 preview-latex-style_11.91-2 procps_2:3.3.15-2 python_2.7.15-4 python-minimal_2.7.15-4 python2_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.16~rc1-1 python2.7-minimal_2.7.16~rc1-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librostlab-blast-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_241-1+rpi1 systemd-sysv_241-1+rpi1 sysvinit-utils_2.93-8 t1utils_1.41-3 tar_1.30+dfsg-5 tex-common_6.11 texlive-base_2018.20190227-2 texlive-binaries_2018.20181218.49446-1 texlive-fonts-recommended_2018.20190227-2 texlive-latex-base_2018.20190227-2 texlive-latex-extra_2018.20190227-1 texlive-latex-recommended_2018.20190227-2 texlive-pictures_2018.20190227-2 tzdata_2018i-1 ucf_3.0038+nmu1 udev_241-1+rpi1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Mar 18 09:52:25 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./librostlab-blast_1.0.1-10.dsc
dpkg-source: info: extracting librostlab-blast in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking librostlab-blast_1.0.1.orig.tar.gz
dpkg-source: info: unpacking librostlab-blast_1.0.1-10.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying reproducible.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-2d4d355b-3a7c-4c4a-9597-582d6f775401
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package librostlab-blast
dpkg-buildpackage: info: source version 1.0.1-10
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
rm -f lib/librostlab-blast.tag
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:7: installing './compile'
configure.ac:5: installing './missing'
lib/Makefile.am: installing './depcomp'
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf=No
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf=No
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for bison... bison -y
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... none needed
checking whether yytext is a pointer... no
checking rostlab/aux_functions.h usability... yes
checking rostlab/aux_functions.h presence... yes
checking for rostlab/aux_functions.h... yes
checking rostlab/rostlab_stdexcept.h usability... yes
checking rostlab/rostlab_stdexcept.h presence... yes
checking for rostlab/rostlab_stdexcept.h... yes
checking for doxygen... /usr/bin/doxygen
checking for perl... /usr/bin/perl
checking for dot... /usr/bin/dot
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating lib/Makefile
config.status: creating lib/Doxyfile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[3]: Entering directory '/<<PKGBUILDDIR>>'
Making all in lib
make[4]: Entering directory '/<<PKGBUILDDIR>>/lib'
mkdir -p rostlab
/bin/bash ../ylwrap blast-parser-scanner.lpp lex.yy.c blast-parser-scanner.cpp -- flex
/bin/bash ../ylwrap blast-parser-parser.ypp y.tab.c blast-parser-parser.cpp y.tab.h rostlab/blast-parser-parser.h y.output blast-parser-parser.output stack.hh rostlab/blast-parser-stack.h location.hh rostlab/blast-parser-location.h position.hh rostlab/blast-parser-position.h -- bison -y
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:1.1-9: warning: POSIX Yacc does not support %skeleton [-Wyacc]
%skeleton "lalr1.cc"
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:1.11-20: warning: POSIX Yacc does not support string literals [-Wyacc]
%skeleton "lalr1.cc"
^~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:20.1-8: warning: POSIX Yacc does not support %require [-Wyacc]
%require "2.4.1"
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:20.10-16: warning: POSIX Yacc does not support string literals [-Wyacc]
%require "2.4.1"
^~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:21.1-8: warning: POSIX Yacc does not support %defines [-Wyacc]
%defines
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.1-7: warning: POSIX Yacc does not support %define [-Wyacc]
%define namespace "rostlab::blast"
^~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.19-34: warning: POSIX Yacc does not support string literals [-Wyacc]
%define namespace "rostlab::blast"
^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.1-34: warning: deprecated directive, use '%define api.namespace {rostlab::blast}' [-Wdeprecated]
%define namespace "rostlab::blast"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:24.1-5: warning: POSIX Yacc does not support %code [-Wyacc]
%code requires {
^~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:37.1-14: warning: POSIX Yacc does not support %error-verbose [-Wyacc]
%error-verbose
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:37.1-14: warning: deprecated directive, use '%define parse.error verbose' [-Wdeprecated]
%error-verbose
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:39.1-15: warning: POSIX Yacc does not support %initial-action [-Wyacc]
%initial-action
^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:53.1-5: warning: POSIX Yacc does not support %code [-Wyacc]
%code {
^~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:59.29-41: warning: POSIX Yacc does not support string literals [-Wyacc]
%token END 0 "end of file"
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:72.29-36: warning: POSIX Yacc does not support string literals [-Wyacc]
%token QUERYEQ "Query="
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:73.29-39: warning: POSIX Yacc does not support string literals [-Wyacc]
%token DATABASECOLON "Database:"
^~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:74.29-48: warning: POSIX Yacc does not support string literals [-Wyacc]
%token RESFROMROUND "Results from round"
^~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:75.29-37: warning: POSIX Yacc does not support string literals [-Wyacc]
%token SCOREEQ "Score ="
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:76.29-38: warning: POSIX Yacc does not support string literals [-Wyacc]
%token EXPECTEQ "Expect ="
^~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:77.29-37: warning: POSIX Yacc does not support string literals [-Wyacc]
%token METHODCOLON "Method:"
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:78.29-42: warning: POSIX Yacc does not support string literals [-Wyacc]
%token IDENTITIESEQ "Identities ="
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:79.29-41: warning: POSIX Yacc does not support string literals [-Wyacc]
%token POSITIVESEQ "Positives ="
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:80.29-36: warning: POSIX Yacc does not support string literals [-Wyacc]
%token GAPSEQ "Gaps ="
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:81.29-38: warning: POSIX Yacc does not support string literals [-Wyacc]
%token STRANDEQ "Strand ="
^~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:82.29-37: warning: POSIX Yacc does not support string literals [-Wyacc]
%token FRAMEEQ "Frame ="
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:83.29-36: warning: POSIX Yacc does not support string literals [-Wyacc]
%token QUERYCOLON "Query:"
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:84.29-36: warning: POSIX Yacc does not support string literals [-Wyacc]
%token SBJCTCOLON "Sbjct:"
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:88.1-11: warning: POSIX Yacc does not support %destructor [-Wyacc]
%destructor { delete $$; } <sval>
^~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:90.1-8: warning: POSIX Yacc does not support %printer [-Wyacc]
%printer { debug_stream () << *$$; } <sval>
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:91.1-8: warning: POSIX Yacc does not support %printer [-Wyacc]
%printer { debug_stream () << $$; } <ival>
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:109.9-16: warning: POSIX Yacc does not support string literals [-Wyacc]
query: "Query=" STRING INT
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:122.11-21: warning: POSIX Yacc does not support string literals [-Wyacc]
database: "Database:" STRING INT INT
^~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:137.15-34: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Results from round" INT
^~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:201.19-27: warning: POSIX Yacc does not support string literals [-Wyacc]
hsp_headerfield: "Score =" num INT
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:203.19-28: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Expect =" num
^~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:205.19-27: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Method:" STRING
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:207.19-32: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Identities =" INT
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:209.19-31: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Positives =" INT
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:211.19-26: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Gaps =" INT
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:213.19-28: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Strand =" STRING '/' STRING
^~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:215.19-27: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Frame =" INT '/' INT
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:217.19-27: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Frame =" INT
^~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:224.15-22: warning: POSIX Yacc does not support string literals [-Wyacc]
alitriple: "Query:" INT STRING INT STRING "Sbjct:" INT STRING INT
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:224.46-53: warning: POSIX Yacc does not support string literals [-Wyacc]
alitriple: "Query:" INT STRING INT STRING "Sbjct:" INT STRING INT
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:247.15-22: warning: POSIX Yacc does not support string literals [-Wyacc]
| "Query:" '0' /* bug as far as I can tell */
^~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp:22.1-34: warning: %define variable 'api.namespace' requires '{...}' values [-Wdeprecated]
%define namespace "rostlab::blast"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/lib/blast-parser-parser.ypp: warning: fix-its can be applied. Rerun with option '--update'. [-Wother]
updating rostlab/blast-parser-location.h
updating rostlab/blast-parser-position.h
updating rostlab/blast-parser-stack.h
updating rostlab/blast-parser-parser.h
sed -i -e 's,\by.tab.h\b,rostlab/blast-parser-parser.h,g' blast-parser-parser.cpp
sed -i -e 's,\bstack.hh\b,rostlab/blast-parser-stack.h,g;s,\blocation.hh\b,rostlab/blast-parser-location.h,g;' rostlab/blast-parser-parser.h
sed -i -e 's,\bposition.hh\b,rostlab/blast-parser-position.h,g;' rostlab/blast-parser-location.h
make all-am
make[5]: Entering directory '/<<PKGBUILDDIR>>/lib'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-driver.lo `test -f 'blast-parser-driver.cpp' || echo './'`blast-parser-driver.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-blast-parser-parser.lo `test -f 'blast-parser-parser.cpp' || echo './'`blast-parser-parser.cpp
\
\
/bin/bash ../ylwrap `test -f 'blast-parser-scanner.lpp' || echo './'`blast-parser-scanner.lpp lex.yy.c librostlab_blast_la-blast-parser-scanner.cpp -- flex -Cfe
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-parser.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-blast-parser-driver.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c -o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.lo `test -f 'librostlab_blast_la-blast-parser-scanner.cpp' || echo './'`librostlab_blast_la-blast-parser-scanner.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c librostlab_blast_la-blast-parser-scanner.cpp -fPIC -DPIC -o .libs/librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o
In file included from /usr/include/c++/8/vector:69,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:40:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::parser::stack_symbol_type; _Alloc = std::allocator<rostlab::blast::parser::stack_symbol_type>]':
/usr/include/c++/8/bits/vector.tcc:418:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> >::iterator' {aka '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:40:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void rostlab::blast::parser::yypush_(const char*, rostlab::blast::parser::stack_symbol_type&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::parser::stack_symbol_type*, std::vector<rostlab::blast::parser::stack_symbol_type, std::allocator<rostlab::blast::parser::stack_symbol_type> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:40:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::oneline; _Alloc = std::allocator<rostlab::blast::oneline>]':
/usr/include/c++/8/bits/vector.tcc:418:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::oneline>::iterator' {aka '__gnu_cxx::__normal_iterator<rostlab::blast::oneline*, std::vector<rostlab::blast::oneline> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = rostlab::blast::hsp; _Alloc = std::allocator<rostlab::blast::hsp>]':
/usr/include/c++/8/bits/vector.tcc:418:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::hsp>::iterator' {aka '__gnu_cxx::__normal_iterator<rostlab::blast::hsp*, std::vector<rostlab::blast::hsp> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:418:5: note: parameter passing for argument of type 'std::vector<rostlab::blast::hsp>::iterator' {aka '__gnu_cxx::__normal_iterator<rostlab::blast::hsp*, std::vector<rostlab::blast::hsp> >'} changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-driver.cpp -o librostlab_blast_la-blast-parser-driver.o >/dev/null 2>&1
In file included from /usr/include/c++/8/vector:64,
from ./rostlab/blast-result.h:24,
from blast-parser-parser.ypp:26,
from blast-parser-parser.cpp:40:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual int rostlab::blast::parser::parse()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::oneline*, std::vector<rostlab::blast::oneline> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rostlab::blast::hsp*, std::vector<rostlab::blast::hsp> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c blast-parser-parser.cpp -o librostlab_blast_la-blast-parser-parser.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -c librostlab_blast_la-blast-parser-scanner.cpp -o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -Wall -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -version-info 0:0:0 -Wall -Wl,-z,relro -Wl,-z,now -o librostlab-blast.la -rpath /usr/lib/arm-linux-gnueabihf librostlab_blast_la-blast-parser-driver.lo librostlab_blast_la-blast-parser-parser.lo librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.lo
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/librostlab_blast_la-blast-parser-driver.o .libs/librostlab_blast_la-blast-parser-parser.o .libs/librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,librostlab-blast.so.0 -o .libs/librostlab-blast.so.0.0.0
libtool: link: (cd ".libs" && rm -f "librostlab-blast.so.0" && ln -s "librostlab-blast.so.0.0.0" "librostlab-blast.so.0")
libtool: link: (cd ".libs" && rm -f "librostlab-blast.so" && ln -s "librostlab-blast.so.0.0.0" "librostlab-blast.so")
libtool: link: ar cru .libs/librostlab-blast.a librostlab_blast_la-blast-parser-driver.o librostlab_blast_la-blast-parser-parser.o librostlab_blast_la-librostlab_blast_la-blast-parser-scanner.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/librostlab-blast.a
libtool: link: ( cd ".libs" && rm -f "librostlab-blast.la" && ln -s "../librostlab-blast.la" "librostlab-blast.la" )
make[5]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[4]: Entering directory '/<<PKGBUILDDIR>>'
make[4]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
/usr/bin/make -C lib doxygen-doc
make[2]: Entering directory '/<<PKGBUILDDIR>>/lib'
rm -rf ../doxygen-doc
SRCDIR='.' PROJECT='librostlab-blast' DOCDIR='../doxygen-doc' VERSION='1.0.1' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./Doxyfile
warning: Tag `SYMBOL_CACHE_SIZE' at line 290 of file `./Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `SHOW_DIRECTORIES' at line 490 of file `./Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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warning: Tag `XML_DTD' at line 1263 of file `./Doxyfile' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
error: Tag file `/usr/share/doc/librostlab-doc/librostlab.tag' does not exist or is not a file. Skipping it...
/<<PKGBUILDDIR>>/lib/rostlab/blast-parser-location.h:34: warning: the name `location.hh' supplied as the second argument in the \file statement is not an input file
/<<PKGBUILDDIR>>/lib/rostlab/blast-parser-parser.h:35: warning: the name `y.tab.h' supplied as the second argument in the \file statement is not an input file
Notice: Output directory `../doxygen-doc' does not exist. I have created it for you.
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Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/lib/rostlab/blast-parser-driver.h...
Parsing file /<<PKGBUILDDIR>>/lib/rostlab/blast-parser-driver.h...
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Parsing file /<<PKGBUILDDIR>>/lib/rostlab/blast-result.h...
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Generating code for file rostlab/blast-parser-driver.h...
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Generating docs for file rostlab/blast-parser-driver.h...
Generating docs for file rostlab/blast-parser-location.h...
Generating docs for file rostlab/blast-parser-parser.h...
Generating docs for file rostlab/blast-parser-position.h...
Generating docs for file rostlab/blast-parser-stack.h...
Generating docs for file rostlab/blast-result.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating namespace index...
Generating docs for namespace rostlab
Generating docs for namespace rostlab::blast
Generating docs for compound rostlab::blast::hit...
Generating docs for compound rostlab::blast::hsp...
Generating docs for compound rostlab::blast::location...
Generating docs for compound rostlab::blast::oneline...
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Generating docs for nested compound rostlab::blast::parser::basic_symbol...
Generating docs for nested compound rostlab::blast::parser::by_type...
Generating docs for nested compound rostlab::blast::parser::semantic_type...
Generating docs for nested compound rostlab::blast::parser::stack::slice...
Generating docs for nested compound rostlab::blast::parser::symbol_type...
Generating docs for nested compound rostlab::blast::parser::syntax_error...
Generating docs for nested compound rostlab::blast::parser::token...
Generating docs for compound rostlab::blast::parser_driver...
Generating docs for compound rostlab::blast::parser_error...
Generating docs for compound rostlab::blast::position...
Generating docs for compound rostlab::blast::result...
Generating docs for compound rostlab::blast::round...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running dot...
Generating dot graphs using 5 parallel threads...
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lookup cache used 541/65536 hits=4560 misses=586
finished...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 check VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making check in lib
make[2]: Entering directory '/<<PKGBUILDDIR>>/lib'
make check-am
make[3]: Entering directory '/<<PKGBUILDDIR>>/lib'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making install in lib
make[2]: Entering directory '/<<PKGBUILDDIR>>/lib'
make install-am
make[3]: Entering directory '/<<PKGBUILDDIR>>/lib'
make[4]: Entering directory '/<<PKGBUILDDIR>>/lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c librostlab-blast.la '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/librostlab-blast.so.0.0.0 /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab-blast.so.0.0.0 librostlab-blast.so.0 || { rm -f librostlab-blast.so.0 && ln -s librostlab-blast.so.0.0.0 librostlab-blast.so.0; }; })
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab-blast.so.0.0.0 librostlab-blast.so || { rm -f librostlab-blast.so && ln -s librostlab-blast.so.0.0.0 librostlab-blast.so; }; })
libtool: install: /usr/bin/install -c .libs/librostlab-blast.lai /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.la
libtool: install: /usr/bin/install -c .libs/librostlab-blast.a /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: install: chmod 644 /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: install: ranlib /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
/usr/bin/install -c -m 644 rostlab/blast-parser-driver.h rostlab/blast-result.h '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
/usr/bin/install -c -m 644 rostlab/blast-parser-location.h rostlab/blast-parser-parser.h rostlab/blast-parser-position.h rostlab/blast-parser-stack.h '/<<PKGBUILDDIR>>/debian/tmp/usr/include/rostlab'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/librostlab-blast/examples'
/usr/bin/install -c -m 644 examples/converged.ali examples/parseblast.cpp '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/librostlab-blast/examples'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
d-shlibmove --commit \
--multiarch \
--exclude-la \
--v5 \
--movedev debian/tmp/usr/include/* usr/include \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
set -e
install -d -m 755 debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.a debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so debian/librostlab-blast0-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0 debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf
PKGDEV=librostlab-blast0-dev
PKGSHL=librostlab-blast0v5
install -d -m 755 debian/librostlab-blast0-dev/usr/include
mv debian/tmp/usr/include/rostlab debian/librostlab-blast0-dev/usr/include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_installdocs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installdocs
find debian -name "*.md5" -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installchangelogs -a
dh_installexamples -a
dh_perl -a
debian/rules override_dh_link
make[1]: Entering directory '/<<PKGBUILDDIR>>'
find debian -name jquery.js -delete
dh_link
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_compress -Xlibrostlab-blast.tag
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librostlab-blast0v5/usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'librostlab-blast0-dev' in '../librostlab-blast0-dev_1.0.1-10_armhf.deb'.
dpkg-deb: building package 'librostlab-blast0v5' in '../librostlab-blast0v5_1.0.1-10_armhf.deb'.
dpkg-deb: building package 'librostlab-blast0v5-dbgsym' in '../librostlab-blast0v5-dbgsym_1.0.1-10_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../librostlab-blast_1.0.1-10_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-03-23T11:00:47Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
librostlab-blast_1.0.1-10_armhf.changes:
----------------------------------------
Format: 1.8
Date: Mon, 18 Mar 2019 10:48:04 +0100
Source: librostlab-blast
Binary: librostlab-blast0-dev librostlab-blast0v5 librostlab-blast0v5-dbgsym
Architecture: armhf
Version: 1.0.1-10
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
librostlab-blast0-dev - very fast C++ library for parsing the output of NCBI BLAST progra
librostlab-blast0v5 - very fast C++ library for parsing the output of NCBI BLAST progra
Closes: 924834
Changes:
librostlab-blast (1.0.1-10) unstable; urgency=medium
.
* Do not render PDF documentation any more since its not really important
for users and doxygen 1.8.5 breaks the build of PDF documentation
Closes: #924834
* Standards-Version: 4.3.0
Checksums-Sha1:
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829f12cd2acd1cb811a0256f21540d367e4cb9e5 421848 librostlab-blast0v5-dbgsym_1.0.1-10_armhf.deb
3b03f185fcd1825f8eecf028317aeb78ea8cb24f 71760 librostlab-blast0v5_1.0.1-10_armhf.deb
cf006866cb6b396c6d2f85d9ae68730aed635033 9523 librostlab-blast_1.0.1-10_armhf.buildinfo
Checksums-Sha256:
5eefb1b9067c349b469e30d0feb93ae6b27c16f519884b8e377bde8598ab0638 87340 librostlab-blast0-dev_1.0.1-10_armhf.deb
ff0f0bf7cd6d046fb834fe78176953a1872b5f46526944ad9557f3319f85817a 421848 librostlab-blast0v5-dbgsym_1.0.1-10_armhf.deb
2786974e7d762456ea4e326a969faba7ac72fc6083987c086758fd43bcb3487b 71760 librostlab-blast0v5_1.0.1-10_armhf.deb
231e0924f9927b0033354b8cbb5fdef327eeda4ee5a576d68fc10a659d32b212 9523 librostlab-blast_1.0.1-10_armhf.buildinfo
Files:
19de0e9a0aaacb563c683b6d04635796 87340 libdevel optional librostlab-blast0-dev_1.0.1-10_armhf.deb
cc8b7c9a86e076a3a58bb4866828aef7 421848 debug optional librostlab-blast0v5-dbgsym_1.0.1-10_armhf.deb
d81378de9a35a8536ecc6b4dfcb745b6 71760 libs optional librostlab-blast0v5_1.0.1-10_armhf.deb
95ec632e84d297716b72dd8552c3c237 9523 science optional librostlab-blast_1.0.1-10_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
librostlab-blast0-dev_1.0.1-10_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 87340 bytes: control archive=1220 bytes.
970 bytes, 24 lines control
1146 bytes, 14 lines md5sums
Package: librostlab-blast0-dev
Source: librostlab-blast
Version: 1.0.1-10
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1374
Depends: librostlab-blast0v5 (= 1.0.1-10), librostlab-dev
Suggests: librostlab-blast-doc
Conflicts: librostlab-blast-dev
Provides: librostlab-blast-dev
Section: libdevel
Priority: optional
Homepage: http://rostlab.org/
Description: very fast C++ library for parsing the output of NCBI BLAST programs (devel)
This package provides a very fast library for parsing the default output of
NCBI BLAST programs into a C++ structure.
.
libzerg is faster, but it provides only lexing (i.e. it only returns pairs
of token identifiers and token string values). librostlab-blast uses a
parser generated with bison on top of a flex-generated lexer very similar to
that of libzerg.
.
This package contains files necessary for developing applications with
librostlab-blast.
drwxr-xr-x root/root 0 2019-03-18 09:48 ./
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/include/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/include/rostlab/
-rw-r--r-- root/root 4174 2019-03-18 09:48 ./usr/include/rostlab/blast-parser-driver.h
-rw-r--r-- root/root 8488 2019-03-18 09:48 ./usr/include/rostlab/blast-parser-location.h
-rw-r--r-- root/root 19887 2019-03-18 09:48 ./usr/include/rostlab/blast-parser-parser.h
-rw-r--r-- root/root 420 2019-03-18 09:48 ./usr/include/rostlab/blast-parser-position.h
-rw-r--r-- root/root 319 2019-03-18 09:48 ./usr/include/rostlab/blast-parser-stack.h
-rw-r--r-- root/root 10413 2019-03-18 09:48 ./usr/include/rostlab/blast-result.h
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 1335356 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.a
lrwxrwxrwx root/root 0 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so -> librostlab-blast.so.0.0.0
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/
-rw-r--r-- root/root 820 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/README.test
-rw-r--r-- root/root 1410 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/changelog.Debian.gz
-rw-r--r-- root/root 210 2012-11-24 19:25 ./usr/share/doc/librostlab-blast0-dev/changelog.gz
-rw-r--r-- root/root 2024 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/copyright
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/examples/
-rw-r--r-- root/root 1580 2012-11-24 16:20 ./usr/share/doc/librostlab-blast0-dev/examples/converged.ali.gz
-rw-r--r-- root/root 324 2012-11-24 16:20 ./usr/share/doc/librostlab-blast0-dev/examples/parseblast.cpp
-rw-r--r-- root/root 676 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0-dev/installation-test
librostlab-blast0v5-dbgsym_1.0.1-10_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 421848 bytes: control archive=548 bytes.
417 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: librostlab-blast0v5-dbgsym
Source: librostlab-blast
Version: 1.0.1-10
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 442
Depends: librostlab-blast0v5 (= 1.0.1-10)
Section: debug
Priority: optional
Description: debug symbols for librostlab-blast0v5
Build-Ids: 9ef06316f83065fd617c20e61357a9fd200f0a6f
drwxr-xr-x root/root 0 2019-03-18 09:48 ./
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/debug/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/debug/.build-id/9e/
-rw-r--r-- root/root 442328 2019-03-18 09:48 ./usr/lib/debug/.build-id/9e/f06316f83065fd617c20e61357a9fd200f0a6f.debug
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0v5-dbgsym -> librostlab-blast0v5
librostlab-blast0v5_1.0.1-10_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 71760 bytes: control archive=1000 bytes.
878 bytes, 22 lines control
335 bytes, 4 lines md5sums
39 bytes, 1 lines shlibs
67 bytes, 2 lines triggers
Package: librostlab-blast0v5
Source: librostlab-blast
Version: 1.0.1-10
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1254
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
Conflicts: librostlab-blast0
Replaces: librostlab-blast0
Section: libs
Priority: optional
Homepage: http://rostlab.org/
Description: very fast C++ library for parsing the output of NCBI BLAST programs
This package provides a very fast library for parsing the default output of
NCBI BLAST programs into a C++ structure.
.
libzerg is faster, but it provides only lexing (i.e. it only returns pairs
of token identifiers and token string values). librostlab-blast uses a
parser generated with bison on top of a flex-generated lexer very similar to
that of libzerg.
.
This package contains the shared library.
drwxr-xr-x root/root 0 2019-03-18 09:48 ./
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0 -> librostlab-blast.so.0.0.0
-rw-r--r-- root/root 1267104 2019-03-18 09:48 ./usr/lib/arm-linux-gnueabihf/librostlab-blast.so.0.0.0
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0v5/
-rw-r--r-- root/root 1410 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0v5/changelog.Debian.gz
-rw-r--r-- root/root 210 2012-11-24 19:25 ./usr/share/doc/librostlab-blast0v5/changelog.gz
-rw-r--r-- root/root 2024 2019-03-18 09:48 ./usr/share/doc/librostlab-blast0v5/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 29996
Build-Time: 210
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1232
Job: librostlab-blast_1.0.1-10
Machine Architecture: armhf
Package: librostlab-blast
Package-Time: 1498
Source-Version: 1.0.1-10
Space: 29996
Status: successful
Version: 1.0.1-10
--------------------------------------------------------------------------------
Finished at 2019-03-23T11:00:47Z
Build needed 00:24:58, 29996k disk space