libminc →
2.3.00-5 →
armhf → 2018-02-14 14:46:37
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| libminc 2.3.00-5 (armhf) Wed, 14 Feb 2018 14:23:59 +0000 |
+==============================================================================+
Package: libminc
Version: 2.3.00-5
Source Version: 2.3.00-5
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-5f2f2229-b47e-41d1-803b-dd429c3091f6' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.6 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.3 MB]
Fetched 22.9 MB in 36s (637 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http: aptMethod::Configuration: could not load seccomp policy: Invalid argument
W: store: aptMethod::Configuration: could not load seccomp policy: Invalid argument
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libminc' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/libminc.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/libminc.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 800 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main libminc 2.3.00-5 (dsc) [1744 B]
Get:2 http://172.17.0.1/private buster-staging/main libminc 2.3.00-5 (tar) [786 kB]
Get:3 http://172.17.0.1/private buster-staging/main libminc 2.3.00-5 (diff) [12.9 kB]
Fetched 800 kB in 0s (3564 kB/s)
Download complete and in download only mode
W: http: aptMethod::Configuration: could not load seccomp policy: Invalid argument
I: NOTICE: Log filtering will replace 'build/libminc-LmuDqT/libminc-2.3.00' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libminc-LmuDqT' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-L6ZlbL/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-L6ZlbL/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3208 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
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W: store: aptMethod::Configuration: could not load seccomp policy: Invalid argument
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 21 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (5607 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15333 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
W: copy: aptMethod::Configuration: could not load seccomp policy: Invalid argument
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev
Filtered Build-Depends: debhelper (>= 10), cmake, libnetcdf-dev, libnifti-dev, zlib1g-dev, libhdf5-dev
dpkg-deb: building package 'sbuild-build-depends-libminc-dummy' in '/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive/sbuild-build-depends-libminc-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libminc-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Sources [518 B]
Get:5 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ Packages [598 B]
Fetched 2449 B in 1s (3409 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: copy: aptMethod::Configuration: could not load seccomp policy: Invalid argument
W: store: aptMethod::Configuration: could not load seccomp policy: Invalid argument
Reading package lists...
Install libminc build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base
groff-base hdf5-helpers intltool-debian libaec-dev libaec0
libarchive-zip-perl libarchive13 libbsd0 libcroco3 libcurl3 libcurl3-gnutls
libcurl4-gnutls-dev libexpat1 libfile-stripnondeterminism-perl libgfortran4
libglib2.0-0 libgssapi-krb5-2 libhdf5-100 libhdf5-cpp-100 libhdf5-dev
libicu57 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp1
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzo2-2 libmagic-mgc
libmagic1 libnetcdf-dev libnetcdf13 libnghttp2-14 libnifti-dev libnifti2
libpipeline1 libpsl5 librhash0 librtmp1 libsigsegv2 libssh2-1 libssl1.0.2
libsz2 libtimedate-perl libtool libuv1 libxml2 m4 man-db po-debconf
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation ninja-build dh-make dwz gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip libcurl4-doc libgnutls28-dev libidn11-dev
libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev pkg-config krb5-doc
krb5-user libhdf5-doc netcdf-bin netcdf-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc less www-browser apparmor
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales pkg-config publicsuffix libltdl-dev
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base
groff-base hdf5-helpers intltool-debian libaec-dev libaec0
libarchive-zip-perl libarchive13 libbsd0 libcroco3 libcurl3 libcurl3-gnutls
libcurl4-gnutls-dev libexpat1 libfile-stripnondeterminism-perl libgfortran4
libglib2.0-0 libgssapi-krb5-2 libhdf5-100 libhdf5-cpp-100 libhdf5-dev
libicu57 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp1
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzo2-2 libmagic-mgc
libmagic1 libnetcdf-dev libnetcdf13 libnghttp2-14 libnifti-dev libnifti2
libpipeline1 libpsl5 librhash0 librtmp1 libsigsegv2 libssh2-1 libssl1.0.2
libsz2 libtimedate-perl libtool libuv1 libxml2 m4 man-db po-debconf
sbuild-build-depends-libminc-dummy zlib1g-dev
0 upgraded, 67 newly installed, 0 to remove and 21 not upgraded.
Need to get 30.1 MB/30.6 MB of archives.
After this operation, 109 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-L6ZlbL/apt_archive ./ sbuild-build-depends-libminc-dummy 0.invalid.0 [888 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.7-1 [96.8 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-4 [1012 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf cmake-data all 3.9.5-1 [1285 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-8 [7411 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-6.1 [602 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libarchive13 armhf 3.2.2-3.1 [251 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9.2 [12.1 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.16-2 [59.0 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.16-2 [116 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.16-2 [265 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.16-2 [135 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.29.0-1 [70.5 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.19.1-4 [43.2 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2n-1 [887 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libcurl3 armhf 7.58.0-2 [276 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf librhash0 armhf 1.3.4-3 [94.7 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libuv1 armhf 1.18.0-3 [86.1 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf cmake armhf 3.9.5-1 [2439 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-1 [32.2 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20171216.1 [75.9 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 16 [16.3 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.040-1 [18.4 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.040-1 [11.8 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.54.3-2 [2651 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-2 [132 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.1.4 [1005 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf hdf5-helpers armhf 1.10.0-patch1+docs-4 [36.0 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libaec0 armhf 0.3.2-2 [19.3 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libcurl3-gnutls armhf 7.58.0-2 [275 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libcurl4-gnutls-dev armhf 7.58.0-2 [346 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.2.0-19+b1 [191 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libsz2 armhf 0.3.2-2 [6080 B]
Get:52 http://172.17.0.1/private buster-staging/main armhf libhdf5-100 armhf 1.10.0-patch1+docs-4 [1220 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-4 [118 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-5 [198 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libaec-dev armhf 0.3.2-2 [17.3 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libhdf5-dev armhf 1.10.0-patch1+docs-4 [2109 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libnetcdf13 armhf 1:4.6.0-2 [329 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libnetcdf-dev armhf 1:4.6.0-2 [80.2 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libnifti2 armhf 2.0.0-2 [92.3 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libnifti-dev armhf 2.0.0-2 [120 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libpsl5:armhf (0.19.1-4) ...
Setting up groff-base (1.22.3-9) ...
Setting up libglib2.0-0:armhf (2.54.3-2) ...
No schema files found: doing nothing.
Setting up gettext-base (0.19.8.1-4) ...
Setting up cmake-data (3.9.5-1) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-8) ...
Setting up libbsd0:armhf (0.8.7-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-6.1) ...
Setting up libmagic-mgc (1:5.32-1) ...
Setting up libmagic1:armhf (1:5.32-1) ...
Setting up librhash0 (1.3.4-3) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up libnifti-dev (2.0.0-2) ...
Setting up libssl1.0.2:armhf (1.0.2n-1) ...
Setting up libssh2-1:armhf (1.8.0-1) ...
Processing triggers for libc-bin (2.26-4+rpi1) ...
Setting up autotools-dev (20171216.1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up hdf5-helpers (1.10.0-patch1+docs-4) ...
Setting up autopoint (0.19.8.1-4) ...
Setting up liblzo2-2:armhf (2.08-1.2) ...
Setting up libsz2:armhf (0.3.2-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (0.040-1) ...
Setting up libjsoncpp1:armhf (1.7.4-3) ...
Setting up libhdf5-100:armhf (1.10.0-patch1+docs-4) ...
Setting up gettext (0.19.8.1-4) ...
Setting up libarchive13:armhf (3.2.2-3.1) ...
Setting up libaec-dev:armhf (0.3.2-2) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-1) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up automake (1:1.15.1-3) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.7.6.1-4) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up libhdf5-cpp-100:armhf (1.10.0-patch1+docs-4) ...
Setting up po-debconf (1.0.20) ...
Setting up libhdf5-dev (1.10.0-patch1+docs-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up libcurl3:armhf (7.58.0-2) ...
Setting up libcurl3-gnutls:armhf (7.58.0-2) ...
Setting up libnetcdf13:armhf (1:4.6.0-2) ...
Setting up cmake (3.9.5-1) ...
Setting up libcurl4-gnutls-dev:armhf (7.58.0-2) ...
Setting up libnetcdf-dev (1:4.6.0-2) ...
Setting up debhelper (11.1.4) ...
Setting up dh-autoreconf (16) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up sbuild-build-depends-libminc-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.26-4+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http: aptMethod::Configuration: could not load seccomp policy: Invalid argument
W: copy: aptMethod::Configuration: could not load seccomp policy: Invalid argument
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.29.1-13+rpi1 dpkg-dev_1.19.0.5 g++-7_7.2.0-19+b1 gcc-7_7.2.0-19+b1 libc6-dev_2.26-4+rpi1 libstdc++-7-dev_7.2.0-19+b1 libstdc++6_7.2.0-19+b1 linux-libc-dev_4.9.51-1+rpi3+b1
Package versions: adduser_3.116 apt_1.6~alpha6 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20171216.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4-5 binutils_2.29.1-13+rpi1 binutils-arm-linux-gnueabihf_2.29.1-13+rpi1 binutils-common_2.29.1-13+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.30.2-0.3 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 cmake_3.9.5-1 cmake-data_3.9.5-1 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.2.0-19+b1 dash_0.5.8-2.10 debconf_1.5.65 debhelper_11.1.4 debianutils_4.8.4 dh-autoreconf_16 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.4-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.43.8-2 e2fsprogs_1.43.8-2 e2fsprogs-l10n_1.43.8-2 fakeroot_1.22-2 fdisk_2.30.2-0.3 file_1:5.32-1 findutils_4.6.0+git+20170828-2 g++_4:7.2.0-1d1 g++-7_7.2.0-19+b1 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-19+b1 gcc-7-base_7.2.0-19+b1 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gnupg_2.2.4-1 gnupg-agent_2.2.4-1 gnupg-l10n_2.2.4-1 gnupg-utils_2.2.4-1 gpg_2.2.4-1 gpg-agent_2.2.4-1 gpg-wks-client_2.2.4-1 gpg-wks-server_2.2.4-1 gpgconf_2.2.4-1 gpgsm_2.2.4-1 gpgv_2.2.4-1 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5 hdf5-helpers_1.10.0-patch1+docs-4 hostname_3.20 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libaec-dev_0.3.2-2 libaec0_0.3.2-2 libapparmor1_2.12-2 libapt-pkg5.0_1.6~alpha6 libarchive-zip-perl_1.60-1 libarchive13_3.2.2-3.1 libasan4_7.2.0-19+b1 libassuan0_2.5.1-1 libatomic1_7.2.0-19+b1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.29.1-13+rpi1 libblkid1_2.30.2-0.3 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-4+rpi1 libc-dev-bin_2.26-4+rpi1 libc6_2.26-4+rpi1 libc6-dev_2.26-4+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_7.2.0-19+b1 libcilkrts5_7.2.0-19+b1 libcomerr2_1.43.8-2 libcroco3_0.6.12-2 libcryptsetup4_2:1.7.5-1 libcurl3_7.58.0-2 libcurl3-gnutls_7.58.0-2 libcurl4-gnutls-dev_7.58.0-2 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.2-1 libdebconfclient0_0.239 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.89-1+rpi1 libdrm2_2.4.89-1+rpi1 libexpat1_2.2.5-3 libfakeroot_1.22-2 libfdisk1_2.30.2-0.3 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.2.0-19+b1 libgcc1_1:7.2.0-19+b1 libgcrypt20_1.8.1-4 libgdbm3_1.8.3-14 libgfortran4_7.2.0-19+b1 libglib2.0-0_2.54.3-2 libgmp10_2:6.1.2+dfsg-2 libgnutls30_3.5.17-1 libgomp1_7.2.0-19+b1 libgpg-error0_1.27-5 libgssapi-krb5-2_1.16-2 libhdf5-100_1.10.0-patch1+docs-4 libhdf5-cpp-100_1.10.0-patch1+docs-4 libhdf5-dev_1.10.0-patch1+docs-4 libhogweed4_3.4-1 libicu57_57.1-8 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libip4tc0_1.6.1-2+b1 libisl15_0.18-1 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.2-0.3 libmpc3_1.1.0-1 libmpfr6_4.0.0-7 libncurses5_6.0+20171125-1 libncursesw5_6.0+20171125-1 libnetcdf-dev_1:4.6.0-2 libnetcdf13_1:4.6.0-2 libnettle6_3.4-1 libnghttp2-14_1.29.0-1 libnifti-dev_2.0.0-2 libnifti2_2.0.0-2 libnpth0_1.5-3 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-8 libperl5.24_5.24.1-7 libperl5.26_5.26.1-4 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3 libpsl5_0.19.1-4 libreadline7_7.0-3 librhash0_1.3.4-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-1 libsmartcols1_2.30.2-0.3 libsqlite3-0_3.22.0-1 libss2_1.43.8-2 libssh2-1_1.8.0-1 libssl1.0.2_1.0.2n-1 libssl1.1_1.1.0g-2 libstdc++-7-dev_7.2.0-19+b1 libstdc++6_7.2.0-19+b1 libsystemd0_236-2 libsz2_0.3.2-2 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20171125-1 libtool_2.4.6-2 libubsan0_7.2.0-19+b1 libudev1_236-2 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.30.2-0.3 libuv1_1.18.0-3 libxml2_2.9.4+dfsg1-6.1 linux-base_4.5 linux-libc-dev_4.9.51-1+rpi3+b1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-4 mawk_1.3.3-17 mount_2.30.2-0.3 multiarch-support_2.26-4+rpi1 nano_2.9.2-1 ncurses-base_6.0+20171125-1 ncurses-bin_6.0+20171125-1 openssl_1.1.0g-2 passwd_1:4.5-1 patch_2.7.5-1 perl_5.26.1-4 perl-base_5.26.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-4 pinentry-curses_1.0.0-3 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libminc-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.11 systemd_236-2 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018c-1 udev_236-2 util-linux_2.30.2-0.3 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Feb 8 14:27:36 2018 UTC
gpgv: using RSA key 346AFED983AF9C47DFE91AFBF81E368B9B26AB98
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libminc_2.3.00-5.dsc
dpkg-source: info: extracting libminc in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libminc_2.3.00.orig.tar.gz
dpkg-source: info: unpacking libminc_2.3.00-5.debian.tar.xz
dpkg-source: info: applying build-using-system-find-dot-cmake
dpkg-source: info: applying fix-uselibminc-cmake
dpkg-source: info: applying use-system-nifti
dpkg-source: info: applying fix-endian-issues-label-data.patch
dpkg-source: info: applying Use-system-FindHDF5-CMake-module.patch
dpkg-source: info: applying hdf5-1.10-support.patch
dpkg-source: info: applying netcdf-4.6.patch
Check disc space
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User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-5f2f2229-b47e-41d1-803b-dd429c3091f6
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libminc
dpkg-buildpackage: info: source version 2.3.00-5
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build libminc-2.3.00
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
dh_clean
debian/rules build-arch
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dh_update_autotools_config -a
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make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f cmake-modules/*HDF5*
dh_auto_configure -- -DLIB_SUFFIX=/arm-linux-gnueabihf -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON
cd obj-arm-linux-gnueabihf && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DLIB_SUFFIX=/arm-linux-gnueabihf -DBUILD_TESTING:BOOL=ON -DLIBMINC_BUILD_EZMINC_EXAMPLES:BOOL=ON -DLIBMINC_BUILD_SHARED_LIBS:BOOL=ON -DLIBMINC_MINC1_SUPPORT:BOOL=ON
-- The C compiler identification is GNU 7.2.0
-- The CXX compiler identification is GNU 7.2.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
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-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found NetCDF headers: /usr/include
-- Found NetCDF library: /usr/lib/arm-linux-gnueabihf/libnetcdf.so
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.8")
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.0.1") found components: C
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-- Looking for include file pwd.h
-- Looking for include file pwd.h - found
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
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make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2
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make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build
Scanning dependencies of target minc2_static
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make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o
[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /<<PKGBUILDDIR>>/libsrc2/convert.c
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /<<PKGBUILDDIR>>/libsrc2/dimension.c
[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /<<PKGBUILDDIR>>/libsrc2/datatype.c
[ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /<<PKGBUILDDIR>>/libsrc2/convert.c
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'micopy_dimension':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:93:45: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:125:44: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'micreate_dimension':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:278:44: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->widths = ( double * ) malloc ( length * sizeof ( double ) );
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_volume_dimensions':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:399:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
number_of_dims = volume->number_of_dims;
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:404:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
max_dims = array_length;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_apparent_dimension_order':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:468:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:562:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_offsets':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1018:43: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
offsets[j] = dimension->start + ( i * dimension->step );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_offsets':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1065:29: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
( double * ) malloc ( dimension->length * sizeof ( double ) );
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1118:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED;
^~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1120:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED;
^~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_start':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1338:57: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1344:61: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1351:63: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_widths':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1556:12: warning: conversion to 'long unsigned int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
diff = dimension->length;
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1558:12: warning: conversion to 'long unsigned int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
diff = array_length;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_widths':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1634:47: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) );
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miconvert_voxel_to_real':
/<<PKGBUILDDIR>>/libsrc2/convert.c:107:39: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miconvert_voxel_to_real':
/<<PKGBUILDDIR>>/libsrc2/convert.c:107:39: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miset_real_value':
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miset_real_value':
/<<PKGBUILDDIR>>/libsrc2/convert.c:256:45: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miconvert_real_to_voxel(volume, coords, ndims, value, &voxel);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/convert.c:256:45: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miconvert_real_to_voxel(volume, coords, ndims, value, &voxel);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miget_volume_real_range':
/<<PKGBUILDDIR>>/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
buffer = malloc(n * sizeof(double));
^
/<<PKGBUILDDIR>>/libsrc2/convert.c: In function 'miget_volume_real_range':
/<<PKGBUILDDIR>>/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
buffer = malloc(n * sizeof(double));
^
/<<PKGBUILDDIR>>/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
buffer = malloc(n * sizeof(double));
^
/<<PKGBUILDDIR>>/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
buffer = malloc(n * sizeof(double));
^
[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /<<PKGBUILDDIR>>/libsrc2/free.c
[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /<<PKGBUILDDIR>>/libsrc2/grpattr.c
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_recursion':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:94:7: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
data->frame_ptr->grp_idx );
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:127:33: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
data->frame_ptr->grp_idx - 1,
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_attr_op':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:168:40: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( data->name_ptr, attr_name, data->name_len );
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_attr_next':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:193:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( path, data->frame_ptr->relpath, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_grp_next':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:284:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( path, data->frame_ptr->relpath, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:285:48: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( data->frame_ptr->relpath, tmp, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'miget_attr_length':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:549:15: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*length = hdf_dims[0];
^~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'miset_attr_values':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:934:31: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slength = strlen ( path ) - ( pch - path );
^
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:938:41: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
std_name[i] = path[pch - path + 1 + i];
^
[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /<<PKGBUILDDIR>>/libsrc2/datatype.c
[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /<<PKGBUILDDIR>>/libsrc2/hyper.c
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_raw':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:235:21: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:237:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(ndims, buffer, icount, H5Tget_size(type_id),
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:255:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:265:26: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:273:33: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer,buffer,buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:275:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id),
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_icv':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:412:11: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = volume->number_of_dims;
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:424:32: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
mspc_id = H5Screate_simple(ndims, hdf_count, NULL);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:432:44: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:475:21: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slice_ndims = ndims;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:486:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
for (i = slice_ndims; i < ndims; i++ ) {
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:494:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:502:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:639:21: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:641:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:652:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:655:40: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
imap[volume->dim_indices[i]] = i;
^
/<<PKGBUILDDIR>>/libsrc2/hyper.c:662:26: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:669:33: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer,buffer,buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:672:27: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:900:11: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = volume->number_of_dims;
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/hyper.c:16:
/<<PKGBUILDDIR>>/libsrc2/hyper.c:911:50: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple");
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:115:42: note: in definition of macro 'MI_CHECK_HDF_CALL'
#define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);}
^~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:918:43: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:919:43: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:958:21: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slice_ndims = ndims;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:969:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
for (i = slice_ndims; i < ndims; i++ ) {
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:977:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:978:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1030:31: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=(double*)malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1081:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1083:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1094:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1097:40: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
imap[volume->dim_indices[i]] = i;
^
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1103:25: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer2=malloc(input_buffer_size);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1110:32: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer2,buffer,input_buffer_size);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1113:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir);
^~~~~
[ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /<<PKGBUILDDIR>>/libsrc2/dimension.c
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'micopy_dimension':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:93:45: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:125:44: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'micreate_dimension':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:278:44: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->widths = ( double * ) malloc ( length * sizeof ( double ) );
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_volume_dimensions':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:399:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
number_of_dims = volume->number_of_dims;
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:404:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
max_dims = array_length;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_apparent_dimension_order':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:468:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:562:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_offsets':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1018:43: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
offsets[j] = dimension->start + ( i * dimension->step );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_offsets':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1065:29: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
( double * ) malloc ( dimension->length * sizeof ( double ) );
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1118:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED;
^~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1120:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED;
^~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_start':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1338:57: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1344:61: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1351:63: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) );
^
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miget_dimension_widths':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1556:12: warning: conversion to 'long unsigned int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
diff = dimension->length;
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1558:12: warning: conversion to 'long unsigned int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
diff = array_length;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/dimension.c: In function 'miset_dimension_widths':
/<<PKGBUILDDIR>>/libsrc2/dimension.c:1634:47: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) );
^~~~~~~~~
[ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /<<PKGBUILDDIR>>/libsrc2/label.c
/<<PKGBUILDDIR>>/libsrc2/label.c: In function 'miswap4':
/<<PKGBUILDDIR>>/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
return (tmp);
^
/<<PKGBUILDDIR>>/libsrc2/label.c: In function 'miget_label_value_by_index':
/<<PKGBUILDDIR>>/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
result = H5Tget_member_value(volume->mtype_id,idx,value);
^~~
[ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /<<PKGBUILDDIR>>/libsrc2/m2util.c
[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /<<PKGBUILDDIR>>/libsrc2/free.c
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'midownsample_slice':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
x1 = x;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:18: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:18: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1602:40: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_slice_range ( volume, pos, volume->number_of_dims,
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1627:46: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_slice_range ( volume, pos, volume->number_of_dims,
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'minc_update_thumbnail':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
osize[i] = isize[i] / scale;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
in_bytes = scale * isize[1] * isize[2] * sizeof ( double );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1779:14: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
in_bytes = scale * isize[1] * isize[2] * sizeof ( double );
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1782:15: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
out_bytes = osize[1] * osize[2] * sizeof ( double );
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
count[0] = scale;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = slice * scale;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
count[0] = scale;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'alloc1d':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return ( ( double * ) malloc ( sizeof ( double ) * n ) );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'alloc2d':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
mat = ( double ** ) malloc ( n * sizeof ( double * ) );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
mat[i] = ( double * ) malloc ( m * sizeof ( double ) );
^
[ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /<<PKGBUILDDIR>>/libsrc2/record.c
[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /<<PKGBUILDDIR>>/libsrc2/grpattr.c
/<<PKGBUILDDIR>>/libsrc2/record.c: In function 'miget_record_field_name':
/<<PKGBUILDDIR>>/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
*name = H5Tget_member_name(volume->ftype_id, index);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/record.c: In function 'miset_record_field_name':
/<<PKGBUILDDIR>>/libsrc2/record.c:91:20: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
offset = index * H5Tget_size(ftype_id);
^
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_recursion':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:94:7: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
data->frame_ptr->grp_idx );
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:127:33: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
data->frame_ptr->grp_idx - 1,
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_attr_op':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:168:40: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( data->name_ptr, attr_name, data->name_len );
^~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_attr_next':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:193:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( path, data->frame_ptr->relpath, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'milist_grp_next':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:284:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( path, data->frame_ptr->relpath, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:285:48: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy ( data->frame_ptr->relpath, tmp, maxpath );
^~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'miget_attr_length':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:549:15: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
*length = hdf_dims[0];
^~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/grpattr.c: In function 'miset_attr_values':
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:934:31: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slength = strlen ( path ) - ( pch - path );
^
/<<PKGBUILDDIR>>/libsrc2/grpattr.c:938:41: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
std_name[i] = path[pch - path + 1 + i];
^
[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /<<PKGBUILDDIR>>/libsrc2/slice.c
/<<PKGBUILDDIR>>/libsrc2/slice.c: In function 'mirw_slice_minmax':
/<<PKGBUILDDIR>>/libsrc2/slice.c:72:11: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = H5Sget_simple_extent_ndims ( fspc_id );
^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /<<PKGBUILDDIR>>/libsrc2/valid.c
[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /<<PKGBUILDDIR>>/libsrc2/volprops.c
/<<PKGBUILDDIR>>/libsrc2/volprops.c: In function 'miget_volume_props':
/<<PKGBUILDDIR>>/libsrc2/volprops.c:131:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int));
^
/<<PKGBUILDDIR>>/libsrc2/volprops.c:137:33: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->edge_lengths[i] = dims[i];
^~~~
/<<PKGBUILDDIR>>/libsrc2/volprops.c:148:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts,
^
/<<PKGBUILDDIR>>/libsrc2/volprops.c:153:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
handle->zlib_level = cd_values[0];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volprops.c: In function 'miset_props_blocking':
/<<PKGBUILDDIR>>/libsrc2/volprops.c:417:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
props->edge_lengths = (int *) malloc(edge_count*sizeof(int));
^
[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /<<PKGBUILDDIR>>/libsrc2/hyper.c
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_raw':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:235:21: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:237:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(ndims, buffer, icount, H5Tget_size(type_id),
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:255:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:265:26: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:273:33: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer,buffer,buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:275:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id),
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_icv':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:412:11: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = volume->number_of_dims;
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:424:32: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
mspc_id = H5Screate_simple(ndims, hdf_count, NULL);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:432:44: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:475:21: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slice_ndims = ndims;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:486:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
for (i = slice_ndims; i < ndims; i++ ) {
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:494:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:502:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:639:21: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:641:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:652:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:655:40: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
imap[volume->dim_indices[i]] = i;
^
/<<PKGBUILDDIR>>/libsrc2/hyper.c:662:26: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:669:33: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer,buffer,buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:672:27: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized':
/<<PKGBUILDDIR>>/libsrc2/hyper.c:900:11: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = volume->number_of_dims;
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/hyper.c:16:
/<<PKGBUILDDIR>>/libsrc2/hyper.c:911:50: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple");
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:115:42: note: in definition of macro 'MI_CHECK_HDF_CALL'
#define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);}
^~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:918:43: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:919:43: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:958:21: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slice_ndims = ndims;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:969:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
for (i = slice_ndims; i < ndims; i++ ) {
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:977:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_max_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:978:35: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
image_slice_min_buffer=malloc(total_number_of_slices*sizeof(double));
^~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1030:31: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer=(double*)malloc(buffer_size);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1081:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[i] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1083:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1094:42: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka const long long unsigned int}' may alter its value [-Wconversion]
icount[volume->dim_indices[i]] = count[i];
^~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1097:40: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
imap[volume->dim_indices[i]] = i;
^
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1103:25: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
temp_buffer2=malloc(input_buffer_size);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1110:32: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
memcpy(temp_buffer2,buffer,input_buffer_size);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/hyper.c:1113:25: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir);
^~~~~
[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /<<PKGBUILDDIR>>/libsrc2/volume.c
[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/minc2_error.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/minc2_error.c.o -c /<<PKGBUILDDIR>>/libsrc2/minc2_error.c
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function '_hdf_open':
/<<PKGBUILDDIR>>/libsrc2/volume.c:125:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fd = H5Fopen(path, mode, H5P_DEFAULT);
^~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function '_hdf_create':
/<<PKGBUILDDIR>>/libsrc2/volume.c:216:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid);
^~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:8:
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function 'micreate_volume':
/usr/include/hdf5/serial/H5Fpublic.h:57:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:572:35: note: in expansion of macro 'H5F_ACC_TRUNC'
file_id = _hdf_create(filename, H5F_ACC_TRUNC);
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:617:21: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
hdf_size[i] = create_props->edge_lengths[i];
^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:631:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate")
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:116:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET'
#define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);}
^~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:839:70: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions *
^
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:843:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t));
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:114:74: note: in definition of macro 'MI_LOG_ERROR'
#define MI_LOG_ERROR(code,...) mi2log_message(__FILE__,__LINE__,code , ##__VA_ARGS__ )
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:931:73: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int));
^
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:8:
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function 'miopen_volume':
/usr/include/hdf5/serial/H5Fpublic.h:55:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1238:16: note: in expansion of macro 'H5F_ACC_RDONLY'
hdf_mode = H5F_ACC_RDONLY;
^~~~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:56:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1240:16: note: in expansion of macro 'H5F_ACC_RDWR'
hdf_mode = H5F_ACC_RDWR;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:1312:62: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->dim_handles = (midimhandle_t *)malloc(n_dimensions *
^
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:1317:56: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t));
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:114:74: note: in definition of macro 'MI_LOG_ERROR'
#define MI_LOG_ERROR(code,...) mi2log_message(__FILE__,__LINE__,code , ##__VA_ARGS__ )
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:1399:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i);
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1400:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i);
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1401:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
char *tmp_nm = H5Tget_member_name(handle->ftype_id, i);
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.c: In function 'mi2read_cfg':
/<<PKGBUILDDIR>>/libsrc2/minc2_error.c:271:42: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy(buffer, tmp, maxlen);
^~~~~~
[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/time_stamp.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/time_stamp.c.o -c /<<PKGBUILDDIR>>/libsrc/time_stamp.c
[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/read_file_names.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/read_file_names.c.o -c /<<PKGBUILDDIR>>/libsrc/read_file_names.c
/<<PKGBUILDDIR>>/libsrc/read_file_names.c: In function 'read_file_names':
/<<PKGBUILDDIR>>/libsrc/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
files = malloc(sizeof(*files) * array_size);
^
/<<PKGBUILDDIR>>/libsrc/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
files = realloc(files, sizeof(*files) * array_size);
^
[ 11%] Building C object CMakeFiles/minc2_static.dir/libsrc/ParseArgv.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/ParseArgv.c.o -c /<<PKGBUILDDIR>>/libsrc/ParseArgv.c
[ 11%] Building C object CMakeFiles/minc2_static.dir/libsrc/restructure.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/restructure.c.o -c /<<PKGBUILDDIR>>/libsrc/restructure.c
/<<PKGBUILDDIR>>/libsrc/restructure.c: In function 'restructure_array':
/<<PKGBUILDDIR>>/libsrc/restructure.c:134:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
offset_next = -1; /* Initialize. */
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:64:40: warning: conversion to 'unsigned char' from 'int' may alter its value [-Wconversion]
#define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8)))
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:150:7: note: in expansion of macro 'BIT_SET'
BIT_SET(bitmap, offset_start);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/restructure.c:64:40: warning: conversion to 'unsigned char' from 'int' may alter its value [-Wconversion]
#define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8)))
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:204:11: note: in expansion of macro 'BIT_SET'
BIT_SET(bitmap, offset_next);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c: In function 'PrintUsage':
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c:439:32: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
numSpaces = width + 1 - strlen(infoPtr->key);
^
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
numSpaces = width + 1 - strlen(infoPtr->key);
^~~~~
[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/dim_conversion.c
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/dim_conversion.c:93:
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert':
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/image_conversion.c
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_setdbl':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:399:29: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_range = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:405:28: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_norm = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:407:30: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_user_norm = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:413:33: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_fillvalue = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:417:31: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_dimconv = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:419:30: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_scalar = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:421:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:426:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:431:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:436:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:444:32: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[0] = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:446:32: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[1] = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:448:32: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_keep_aspect = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:461:38: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[idim] = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_inqint':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:760:13: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
*value = dvalue;
^~~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_inqlong':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:789:13: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
*value = dvalue;
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/image_conversion.c:173:
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer':
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_convenience.c
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miset_valid_range':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:430:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
fval[0] = valid_range[0];
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:431:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
fval[1] = valid_range[1];
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miattput_pointer':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:638:10: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX));
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/minc_convenience.c:152:
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miadd_child':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC'
( (type *) malloc( (size_t) (n_items) * sizeof(type) ) )
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR));
^
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size += strlen(MI_CHILD_SEPARATOR);
^~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:765:26: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
child_list_size += strlen(MI_CHILD_SEPARATOR);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size -= strlen(MI_CHILD_SEPARATOR);
^~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:780:26: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
child_list_size -= strlen(MI_CHILD_SEPARATOR);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miappend_history':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
att_val = malloc(att_len + strlen(tm_stamp) + 2);
^
[ 13%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /<<PKGBUILDDIR>>/libsrc2/label.c
/<<PKGBUILDDIR>>/libsrc2/label.c: In function 'miswap4':
/<<PKGBUILDDIR>>/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
return (tmp);
^
/<<PKGBUILDDIR>>/libsrc2/label.c: In function 'miget_label_value_by_index':
/<<PKGBUILDDIR>>/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
result = H5Tget_member_value(volume->mtype_id,idx,value);
^~~
[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /<<PKGBUILDDIR>>/libsrc2/m2util.c
[ 14%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_error.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_error.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_error.c
[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /<<PKGBUILDDIR>>/libsrc2/record.c
[ 15%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /<<PKGBUILDDIR>>/libsrc2/slice.c
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'midownsample_slice':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
x1 = x;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1492:18: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
y1 = y + ( j * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1493:18: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
z1 = z + ( k * scale );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1602:40: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_slice_range ( volume, pos, volume->number_of_dims,
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1627:46: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_slice_range ( volume, pos, volume->number_of_dims,
^~~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'minc_update_thumbnail':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
osize[i] = isize[i] / scale;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
in_bytes = scale * isize[1] * isize[2] * sizeof ( double );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1779:14: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
in_bytes = scale * isize[1] * isize[2] * sizeof ( double );
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1782:15: warning: conversion to 'size_t {aka unsigned int}' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
out_bytes = osize[1] * osize[2] * sizeof ( double );
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
count[0] = scale;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = slice * scale;
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
count[0] = scale;
^~~~~
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'alloc1d':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return ( ( double * ) malloc ( sizeof ( double ) * n ) );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c: In function 'alloc2d':
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
mat = ( double ** ) malloc ( n * sizeof ( double * ) );
^
/<<PKGBUILDDIR>>/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
mat[i] = ( double * ) malloc ( m * sizeof ( double ) );
^
/<<PKGBUILDDIR>>/libsrc2/record.c: In function 'miget_record_field_name':
/<<PKGBUILDDIR>>/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
*name = H5Tget_member_name(volume->ftype_id, index);
^~~~~
/<<PKGBUILDDIR>>/libsrc2/record.c: In function 'miset_record_field_name':
/<<PKGBUILDDIR>>/libsrc2/record.c:91:20: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
offset = index * H5Tget_size(ftype_id);
^
[ 15%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /<<PKGBUILDDIR>>/libsrc2/valid.c
/<<PKGBUILDDIR>>/libsrc2/slice.c: In function 'mirw_slice_minmax':
/<<PKGBUILDDIR>>/libsrc2/slice.c:72:11: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ndims = H5Sget_simple_extent_ndims ( fspc_id );
^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /<<PKGBUILDDIR>>/libsrc/nd_loop.c
[ 15%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /<<PKGBUILDDIR>>/libsrc2/volprops.c
[ 16%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /<<PKGBUILDDIR>>/libsrc2/volume.c
[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c
/<<PKGBUILDDIR>>/libsrc2/volprops.c: In function 'miget_volume_props':
/<<PKGBUILDDIR>>/libsrc2/volprops.c:131:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int));
^
/<<PKGBUILDDIR>>/libsrc2/volprops.c:137:33: warning: conversion to 'int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
handle->edge_lengths[i] = dims[i];
^~~~
/<<PKGBUILDDIR>>/libsrc2/volprops.c:148:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts,
^
/<<PKGBUILDDIR>>/libsrc2/volprops.c:153:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
handle->zlib_level = cd_values[0];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volprops.c: In function 'miset_props_blocking':
/<<PKGBUILDDIR>>/libsrc2/volprops.c:417:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
props->edge_lengths = (int *) malloc(edge_count*sizeof(int));
^
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function '_hdf_open':
/<<PKGBUILDDIR>>/libsrc2/volume.c:125:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fd = H5Fopen(path, mode, H5P_DEFAULT);
^~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function '_hdf_create':
/<<PKGBUILDDIR>>/libsrc2/volume.c:216:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid);
^~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:8:
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function 'micreate_volume':
/usr/include/hdf5/serial/H5Fpublic.h:57:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:572:35: note: in expansion of macro 'H5F_ACC_TRUNC'
file_id = _hdf_create(filename, H5F_ACC_TRUNC);
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:617:21: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
hdf_size[i] = create_props->edge_lengths[i];
^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:631:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate")
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:116:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET'
#define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);}
^~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:839:70: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions *
^
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:843:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t));
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:114:74: note: in definition of macro 'MI_LOG_ERROR'
#define MI_LOG_ERROR(code,...) mi2log_message(__FILE__,__LINE__,code , ##__VA_ARGS__ )
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:931:73: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int));
^
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:8:
/<<PKGBUILDDIR>>/libsrc2/volume.c: In function 'miopen_volume':
/usr/include/hdf5/serial/H5Fpublic.h:55:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1238:16: note: in expansion of macro 'H5F_ACC_RDONLY'
hdf_mode = H5F_ACC_RDONLY;
^~~~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:56:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1240:16: note: in expansion of macro 'H5F_ACC_RDWR'
hdf_mode = H5F_ACC_RDWR;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:1312:62: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
handle->dim_handles = (midimhandle_t *)malloc(n_dimensions *
^
In file included from /<<PKGBUILDDIR>>/libsrc2/minc2.h:11:0,
from /<<PKGBUILDDIR>>/libsrc2/volume.c:30:
/<<PKGBUILDDIR>>/libsrc2/volume.c:1317:56: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t));
^
/<<PKGBUILDDIR>>/libsrc2/minc2_error.h:114:74: note: in definition of macro 'MI_LOG_ERROR'
#define MI_LOG_ERROR(code,...) mi2log_message(__FILE__,__LINE__,code , ##__VA_ARGS__ )
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc2/volume.c:1399:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i);
^
/<<PKGBUILDDIR>>/libsrc2/volume.c:1400:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i);
^
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:182:
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miexpand_file':
/<<PKGBUILDDIR>>/libsrc2/volume.c:1401:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
char *tmp_nm = H5Tget_member_name(handle->ftype_id, i);
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char);
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC'
( (type *) malloc( (size_t) (n_items) * sizeof(type) ) )
^~~~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc/minc.h:170,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:182:
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miopen':
/usr/include/hdf5/serial/H5Fpublic.h:56:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:517:14: note: in expansion of macro 'H5F_ACC_RDWR'
hmode = H5F_ACC_RDWR;
^~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:55:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY'
hmode = H5F_ACC_RDONLY;
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miattputstr':
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:1033:24: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
strlen(value) + 1, value);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miread_cfg':
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:1905:42: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy(buffer, tmp, maxlen);
^~~~~~
[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/value_conversion.c
/<<PKGBUILDDIR>>/libsrc/value_conversion.c: In function 'MI_convert_type':
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
(size_t) number_of_values*inincr);
^
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/value_conversion.c:98:
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /<<PKGBUILDDIR>>/libsrc/voxel_loop.c
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c: In function 'update_history':
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c:1171:15: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
att_length += strlen(arg_string) + 1;
^~
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c:1171:18: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
att_length += strlen(arg_string) + 1;
^~~~~~
[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_var_add':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:200:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims);
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:207:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
milog_message(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims);
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_size':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:368:20: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
int typ_size = H5Tget_size(typ_id);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:369:20: warning: conversion to 'int' from 'hssize_t {aka long long int}' may alter its value [-Wconversion]
int spc_size = H5Sget_simple_extent_npoints(spc_id);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attname':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:453:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
att_id = H5Aopen_idx(loc_id, attnum);
^~~~~~
[ 18%] Building C object CMakeFiles/minc2.dir/libsrc2/minc2_error.c.o
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attinq':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:576:25: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
*length_ptr = typ_size;
^~~~~~~~
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/minc2_error.c.o -c /<<PKGBUILDDIR>>/libsrc2/minc2_error.c
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:579:25: warning: conversion to 'int' from 'hssize_t {aka long long int}' may alter its value [-Wconversion]
*length_ptr = H5Sget_simple_extent_npoints(spc_id);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_put_dimorder':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:634:52: warning: format '%lx' expects argument of type 'long unsigned int', but argument 3 has type 'hid_t {aka long long int}' [-Wformat=]
fprintf(stderr, "Failed to create dimorder %lx\n", dst_id);
~~^
%llx
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:668:14: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
length = H5Tget_size(typ_id);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_dimdef':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:959:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
hdf_set_length(var->dset_id, dimnm, length);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attput':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1148:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
H5Tset_size(ftyp_id, val_len);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1186:33: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
hsize_t temp_size = val_len;
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_vardef':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1323:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
dims[i] = length;
^~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1370:60: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) {
^
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:8:
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1374:81: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
(hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) );
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN'
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1374:81: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
(hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) );
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN'
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1382:38: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
chkdims[i] = chunk_length;
^~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1387:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
H5Pset_deflate(prp_id, comp_level);
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1414:39: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
hdf_set_length(dst_id, varnm, dim->length);
^~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varget':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1530:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
fstart[i] = start_ptr[i];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1531:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
count[i] = length_ptr[i];
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varputg':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1629:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t));
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1645:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
mystart[idim] = start != NULL ? start[idim] : 0;
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1654:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
myedges[idim] = edges[idim];
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1678:29: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
length[idim] = mymap[idim] * myedges[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1679:45: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
stop[idim] = mystart[idim] + myedges[idim] * mystride[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1736:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
mystart[idim] += mystride[idim];
^~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1738:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
mystart[idim] = start[idim];
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_vargetg':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1806:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
mystart = (long *)calloc(varp->ndims * 7, sizeof(long));
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1833:39: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
myedges[idim] = varp->dims[idim] - mystart[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1833:22: warning: conversion to 'long int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
myedges[idim] = varp->dims[idim] - mystart[idim];
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varput':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1953:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
fstart[i] = start_ptr[i];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1954:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
count[i] = length_ptr[i];
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varsize':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2065:23: warning: conversion to 'long int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
size_ptr[i] = dims[i];
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_copy_attr':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2099:26: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL)
^~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_open':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2228:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file_id = H5Fopen(path, mode, H5P_DEFAULT);
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2237:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file->wr_ok = (mode & H5F_ACC_RDWR) != 0;
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2259:37: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
dims[ndims++] = H5Tget_nmembers(type_id);
^~~~~~~~~~~~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc/minc.h:170,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:8:
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_create':
/usr/include/hdf5/serial/H5Fpublic.h:58:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_EXCL (H5CHECK H5OPEN 0x0004u) /*fail if file already exists*/
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2320:15: note: in expansion of macro 'H5F_ACC_EXCL'
cmode = H5F_ACC_EXCL;
^~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:57:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2323:15: note: in expansion of macro 'H5F_ACC_TRUNC'
cmode = H5F_ACC_TRUNC;
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2330:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid);
^~~~~
[ 19%] Building C object CMakeFiles/minc2.dir/libsrc/time_stamp.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/time_stamp.c.o -c /<<PKGBUILDDIR>>/libsrc/time_stamp.c
/<<PKGBUILDDIR>>/libsrc2/minc2_error.c: In function 'mi2read_cfg':
/<<PKGBUILDDIR>>/libsrc2/minc2_error.c:271:42: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy(buffer, tmp, maxlen);
^~~~~~
[ 19%] Building C object CMakeFiles/minc2.dir/libsrc/read_file_names.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/read_file_names.c.o -c /<<PKGBUILDDIR>>/libsrc/read_file_names.c
[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_compat.c
/<<PKGBUILDDIR>>/libsrc/read_file_names.c: In function 'read_file_names':
/<<PKGBUILDDIR>>/libsrc/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
files = malloc(sizeof(*files) * array_size);
^
/<<PKGBUILDDIR>>/libsrc/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
files = realloc(files, sizeof(*files) * array_size);
^
/<<PKGBUILDDIR>>/libsrc/minc_compat.c: In function 'MI2attcopy':
/<<PKGBUILDDIR>>/libsrc/minc_compat.c:307:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
val_ptr = malloc(MI2typelen(att_type) * att_length);
^~~~~~~~~~
[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/ParseArgv.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/ParseArgv.c.o -c /<<PKGBUILDDIR>>/libsrc/ParseArgv.c
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c: In function 'PrintUsage':
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c:439:32: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
numSpaces = width + 1 - strlen(infoPtr->key);
^
/<<PKGBUILDDIR>>/libsrc/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
numSpaces = width + 1 - strlen(infoPtr->key);
^~~~~
[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_simple.c
/<<PKGBUILDDIR>>/libsrc/minc_simple.c: In function 'minc_load_data':
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
ucount[j++] = dim_len[i];
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype),
^~~~~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc.h:172:0,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/minc_simple.c:38:
/<<PKGBUILDDIR>>/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
#define nctypelen MI2typelen
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen'
restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype),
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:416:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:419:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:431:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type));
^~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:446:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_var->var_atts = malloc(p_var->var_natts *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:462:37: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type));
^~~~~
[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/restructure.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/restructure.c.o -c /<<PKGBUILDDIR>>/libsrc/restructure.c
/<<PKGBUILDDIR>>/libsrc/restructure.c: In function 'restructure_array':
/<<PKGBUILDDIR>>/libsrc/restructure.c:134:21: warning: negative integer implicitly converted to unsigned type [-Wsign-conversion]
offset_next = -1; /* Initialize. */
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:64:40: warning: conversion to 'unsigned char' from 'int' may alter its value [-Wconversion]
#define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8)))
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:150:7: note: in expansion of macro 'BIT_SET'
BIT_SET(bitmap, offset_start);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/restructure.c:64:40: warning: conversion to 'unsigned char' from 'int' may alter its value [-Wconversion]
#define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8)))
^
/<<PKGBUILDDIR>>/libsrc/restructure.c:204:11: note: in expansion of macro 'BIT_SET'
BIT_SET(bitmap, offset_next);
^~~~~~~
[ 22%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/dim_conversion.c
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/dim_conversion.c:93:
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert':
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)}
^~~~~~~~~~~~~~
[ 23%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_format_convert.c
[ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/colour.c
[ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/colour_def.c
[ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/gaussian.c
[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/image_conversion.c
[ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/inverse.c
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_setdbl':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:399:29: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_range = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:405:28: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_norm = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:407:30: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_user_norm = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:413:33: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_fillvalue = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:417:31: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_dimconv = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:419:30: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_do_scalar = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:421:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:426:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:431:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:436:14: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
ival = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:444:32: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[0] = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:446:32: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[1] = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:448:32: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_keep_aspect = value; break;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:461:38: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
icvp->user_dim_size[idim] = value;
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_inqint':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:760:13: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
*value = dvalue;
^~~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'miicv_inqlong':
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:789:13: warning: conversion to 'long int' from 'double' may alter its value [-Wfloat-conversion]
*value = dvalue;
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/image_conversion.c:173:
/<<PKGBUILDDIR>>/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer':
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/image_conversion.c:1476:5: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)}
^~~~~~~~~~~~~~
[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/newton.c
[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/points.c
[ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/splines.c
[ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/tensors.c
[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_convenience.c
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miset_valid_range':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:430:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
fval[0] = valid_range[0];
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:431:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
fval[1] = valid_range[1];
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miattput_pointer':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:638:10: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX));
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/minc_convenience.c:152:
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miadd_child':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC'
( (type *) malloc( (size_t) (n_items) * sizeof(type) ) )
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR));
^
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size += strlen(MI_CHILD_SEPARATOR);
^~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:765:26: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
child_list_size += strlen(MI_CHILD_SEPARATOR);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
child_list_size -= strlen(MI_CHILD_SEPARATOR);
^~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:780:26: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
child_list_size -= strlen(MI_CHILD_SEPARATOR);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c: In function 'miappend_history':
/<<PKGBUILDDIR>>/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
att_val = malloc(att_len + strlen(tm_stamp) + 2);
^
[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/minc_error.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_error.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_error.c
[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/transforms.c
[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /<<PKGBUILDDIR>>/libsrc/nd_loop.c
[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c
[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /<<PKGBUILDDIR>>/libsrc/value_conversion.c
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:182:
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miexpand_file':
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:380:38: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
compfile = MALLOC(strlen(path) + max_compression_code_length + 2, char);
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC'
( (type *) malloc( (size_t) (n_items) * sizeof(type) ) )
^~~~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc/minc.h:170,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:182:
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miopen':
/usr/include/hdf5/serial/H5Fpublic.h:56:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:517:14: note: in expansion of macro 'H5F_ACC_RDWR'
hmode = H5F_ACC_RDWR;
^~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:55:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY'
hmode = H5F_ACC_RDONLY;
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c: In function 'MI_convert_type':
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
(size_t) number_of_values*inincr);
^
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miattputstr':
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:1033:24: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
strlen(value) + 1, value);
^~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/value_conversion.c:98:
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:178:37: note: in expansion of macro 'ROUND'
*((unsigned char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'signed char' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:183:35: note: in expansion of macro 'ROUND'
*((signed char *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:192:38: note: in expansion of macro 'ROUND'
*((unsigned short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'short int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:197:36: note: in expansion of macro 'ROUND'
*((signed short *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'unsigned int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:206:36: note: in expansion of macro 'ROUND'
*((unsigned int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:115:20: warning: conversion to 'int' from 'double' may alter its value [-Wfloat-conversion]
#define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:211:34: note: in expansion of macro 'ROUND'
*((signed int *) ptr) = ROUND(dvalue); \
^~~~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:23: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/minc_basic.h:217:26: note: in expansion of macro 'MIN'
*((float *) ptr) = MIN(FLT_MAX,dvalue); \
^~~
/<<PKGBUILDDIR>>/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE'
{MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)}
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c: In function 'miread_cfg':
/<<PKGBUILDDIR>>/libsrc/netcdf_convenience.c:1905:42: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
strncpy(buffer, tmp, maxlen);
^~~~~~
[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c
[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xfs.c
/<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform':
/<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c:184:43: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
volume_filename = alloc_string( string_length(prefix_filename) +
^~~~~~~~~~~~~
[ 30%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /<<PKGBUILDDIR>>/libsrc/voxel_loop.c
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c: In function 'update_history':
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c:1171:15: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
att_length += strlen(arg_string) + 1;
^~
/<<PKGBUILDDIR>>/libsrc/voxel_loop.c:1171:18: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
att_length += strlen(arg_string) + 1;
^~~~~~
[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/grid_transforms.c
[ 31%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_var_add':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:200:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims);
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:207:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
milog_message(MI_MSG_OUTOFMEM, sizeof(hsize_t) * ndims);
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_size':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:368:20: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
int typ_size = H5Tget_size(typ_id);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:369:20: warning: conversion to 'int' from 'hssize_t {aka long long int}' may alter its value [-Wconversion]
int spc_size = H5Sget_simple_extent_npoints(spc_id);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attname':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:453:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
att_id = H5Aopen_idx(loc_id, attnum);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attinq':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:576:25: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
*length_ptr = typ_size;
^~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:579:25: warning: conversion to 'int' from 'hssize_t {aka long long int}' may alter its value [-Wconversion]
*length_ptr = H5Sget_simple_extent_npoints(spc_id);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_put_dimorder':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:634:52: warning: format '%lx' expects argument of type 'long unsigned int', but argument 3 has type 'hid_t {aka long long int}' [-Wformat=]
fprintf(stderr, "Failed to create dimorder %lx\n", dst_id);
~~^
%llx
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_get_dimorder':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:668:14: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
length = H5Tget_size(typ_id);
^~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_dimdef':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:959:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
hdf_set_length(var->dset_id, dimnm, length);
^~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_attput':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1148:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
H5Tset_size(ftyp_id, val_len);
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1186:33: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
hsize_t temp_size = val_len;
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_vardef':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1323:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
dims[i] = length;
^~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1370:60: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if( MI_MAX_VAR_BUFFER_SIZE > dims[i] * val * unit_size ) {
^
In file included from /<<PKGBUILDDIR>>/libsrc/minc_private.h:84:0,
from /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:8:
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1374:81: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
(hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) );
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:34: note: in definition of macro 'MIN'
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
[ 32%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1374:81: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
(hsize_t)( MI_MAX_VAR_BUFFER_SIZE / ( val * unit_size ) ) );
^
/<<PKGBUILDDIR>>/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN'
#define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) )
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1382:38: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
chkdims[i] = chunk_length;
^~~~~~~~~~~~
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_compat.c
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1387:36: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
H5Pset_deflate(prp_id, comp_level);
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1414:39: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
hdf_set_length(dst_id, varnm, dim->length);
^~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varget':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1530:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
fstart[i] = start_ptr[i];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1531:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
count[i] = length_ptr[i];
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varputg':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1629:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t));
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1645:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
mystart[idim] = start != NULL ? start[idim] : 0;
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1654:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
myedges[idim] = edges[idim];
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1678:29: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
length[idim] = mymap[idim] * myedges[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1679:45: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
stop[idim] = mystart[idim] + myedges[idim] * mystride[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1736:16: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'ptrdiff_t {aka int}' may change the sign of the result [-Wsign-conversion]
mystart[idim] += mystride[idim];
^~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1738:22: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
mystart[idim] = start[idim];
^~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_vargetg':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1806:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
mystart = (long *)calloc(varp->ndims * 7, sizeof(long));
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1833:39: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
myedges[idim] = varp->dims[idim] - mystart[idim];
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1833:22: warning: conversion to 'long int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
myedges[idim] = varp->dims[idim] - mystart[idim];
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varput':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1953:19: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
fstart[i] = start_ptr[i];
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:1954:18: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
count[i] = length_ptr[i];
^~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_varsize':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2065:23: warning: conversion to 'long int' from 'hsize_t {aka long long unsigned int}' may alter its value [-Wconversion]
size_ptr[i] = dims[i];
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_copy_attr':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2099:26: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL)
^~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_open':
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2228:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file_id = H5Fopen(path, mode, H5P_DEFAULT);
^~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2237:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file->wr_ok = (mode & H5F_ACC_RDWR) != 0;
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2259:37: warning: conversion to 'hsize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
dims[ndims++] = H5Tget_nmembers(type_id);
^~~~~~~~~~~~~~~
In file included from /usr/include/hdf5/serial/hdf5.h:29:0,
from /<<PKGBUILDDIR>>/libsrc/minc.h:170,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:8:
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c: In function 'hdf_create':
/usr/include/hdf5/serial/H5Fpublic.h:58:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_EXCL (H5CHECK H5OPEN 0x0004u) /*fail if file already exists*/
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2320:15: note: in expansion of macro 'H5F_ACC_EXCL'
cmode = H5F_ACC_EXCL;
^~~~~~~~~~~~
/usr/include/hdf5/serial/H5Fpublic.h:57:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
#define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */
^
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2323:15: note: in expansion of macro 'H5F_ACC_TRUNC'
cmode = H5F_ACC_TRUNC;
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/hdf_convenience.c:2330:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid);
^~~~~
/<<PKGBUILDDIR>>/libsrc/minc_compat.c: In function 'MI2attcopy':
/<<PKGBUILDDIR>>/libsrc/minc_compat.c:307:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
val_ptr = malloc(MI2typelen(att_type) * att_length);
^~~~~~~~~~
[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/mni_io.c
[ 32%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_simple.c
/<<PKGBUILDDIR>>/libsrc/minc_simple.c: In function 'minc_load_data':
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
ucount[j++] = dim_len[i];
^~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype),
^~~~~~~~~
In file included from /<<PKGBUILDDIR>>/libsrc/minc.h:172:0,
from /<<PKGBUILDDIR>>/libsrc/minc_private.h:83,
from /<<PKGBUILDDIR>>/libsrc/minc_simple.c:38:
/<<PKGBUILDDIR>>/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
#define nctypelen MI2typelen
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen'
restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype),
^~~~~~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:416:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:419:77: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:431:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type));
^~~~~
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:446:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
p_var->var_atts = malloc(p_var->var_natts *
^
/<<PKGBUILDDIR>>/libsrc/minc_simple.c:462:37: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type));
^~~~~
[ 33%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/tag_points.c
[ 33%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/thin_plate_spline.c
[ 33%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /<<PKGBUILDDIR>>/libsrc/minc_format_convert.c
[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/colour.c
[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/colour_def.c
[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c
[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/gaussian.c
[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/inverse.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes );
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_1d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:284:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:284:66: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_2d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:73: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_3d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_4d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:71: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:87: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_5d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:71: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:78: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:94: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'realloc_memory':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:535:46: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Error reallocing %lu elements of size %lu.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:535:67: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Error reallocing %lu elements of size %lu.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:548:76: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error("Error: tried to realloc invalid number of elements, %lu.\n",
~~^
%u
[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/newton.c
[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/points.c
[ 37%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc_check.c
[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/splines.c
[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/tensors.c
[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /<<PKGBUILDDIR>>/volume_io/Geometry/transforms.c
[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c
/<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform':
/<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xf_io.c:184:43: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
volume_filename = alloc_string( string_length(prefix_filename) +
^~~~~~~~~~~~~
[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/gen_xfs.c
[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/arrays.c
[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/grid_transforms.c
[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'extract_directory':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
directory = alloc_string( slash_index );
^~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'input_binary_data':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1746:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( " (%d out of %d items of size %ld). ", n_done, n,
~~^
%d
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'output_binary_data':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1786:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( " (%d out of %d items of size %ld). ", n_done, n,
~~^
%d
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'io_quoted_string':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
*str = alloc_string( length );
^~~~~~
[ 41%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/mni_io.c
[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/tag_points.c
[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /<<PKGBUILDDIR>>/volume_io/MNI_formats/thin_plate_spline.c
[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes );
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_1d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:284:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:284:66: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_2d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:325:73: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_3d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:372:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_4d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:71: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:423:87: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_5d':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:64: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:71: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:78: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:478:94: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Cannot alloc 4D array of %lu by %lu by %lu by %lu by %lu elements of %lu bytes.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c: In function 'realloc_memory':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:535:46: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Error reallocing %lu elements of size %lu.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:535:67: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( "Error reallocing %lu elements of size %lu.\n",
~~^
%u
/<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc.c:548:76: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error("Error: tried to realloc invalid number of elements, %lu.\n",
~~^
%u
[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/alloc_check.c
[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/arrays.c
[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c
[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/print.c
[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/print.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'extract_directory':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
directory = alloc_string( slash_index );
^~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'input_binary_data':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1746:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( " (%d out of %d items of size %ld). ", n_done, n,
~~^
%d
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'output_binary_data':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:1786:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t {aka unsigned int}' [-Wformat=]
print_error( " (%d out of %d items of size %ld). ", n_done, n,
~~^
%d
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c: In function 'io_quoted_string':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
*str = alloc_string( length );
^~~~~~
[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/progress.c
[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/progress.c
[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c: In function 'create_string':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
str = alloc_string( string_length(initial) );
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c:235:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
stripped = alloc_string( last_non_blank - first_non_blank + 1 );
^~~~~~~~~~~~~~
[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/time.c
[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/evaluate.c
[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/get_hyperslab.c
[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_free.c
[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c: In function 'create_string':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
str = alloc_string( string_length(initial) );
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks':
/<<PKGBUILDDIR>>/volume_io/Prog_utils/string.c:235:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
stripped = alloc_string( last_non_blank - first_non_blank + 1 );
^~~~~~~~~~~~~~
[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /<<PKGBUILDDIR>>/volume_io/Prog_utils/time.c
[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c:371:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c:372:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/evaluate.c
[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_volume.c
[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/multidim_arrays.c
[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c: In function 'add_minc_history':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c:767:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
new_history = alloc_string( old_att_length );
^~~~~~~~~~~~~~
[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_volume.c
[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/set_hyperslab.c
[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/get_hyperslab.c
[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/volume_cache.c
[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c
[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2583:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2584:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2772:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real));
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2805:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real));
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:143:38: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:144:59: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:145:54: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:152:32: warning: conversion to 'long int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
file->sizes_in_file[d] = dimension_size[d];
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:178:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slices_count*=dimension_size[d];
^~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:178:23: warning: conversion to 'int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slices_count*=dimension_size[d];
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:180:38: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t));
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:181:51: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:202:55: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:371:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:706:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
used_count[n_file_dims] = file->sizes_in_file[n_file_dims];
^~~~
[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_free.c
[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:857:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
long_file_start[file_ind] = (long) file_start[file_ind];
^
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:858:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
long_file_count[file_ind] = (long) file_count[file_ind];
^
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:1217:73: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min);
^~~~
[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c:371:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc.c:372:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mgh.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mgh.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'swapFloat':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:92:16: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
sl.i = ntohl(sl.i);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:92:10: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
sl.i = ntohl(sl.i);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'input_next_slice':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:119:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
n_bytes_per_voxel = get_type_size(in_ptr->file_data_type);
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:120:23: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
n_voxels_in_slice = (in_ptr->sizes_in_file[0] *
^
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'mgh_header_from_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:279:28: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->version = ntohl(hdr_ptr->version);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:279:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->version = ntohl(hdr_ptr->version);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:282:31: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->sizes[i] = ntohl(hdr_ptr->sizes[i]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:282:25: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->sizes[i] = ntohl(hdr_ptr->sizes[i]);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:284:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->type = ntohl(hdr_ptr->type);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:284:19: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->type = ntohl(hdr_ptr->type);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:285:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->dof = ntohl(hdr_ptr->dof);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:285:18: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->dof = ntohl(hdr_ptr->dof);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:286:26: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->goodRASflag = ntohs(hdr_ptr->goodRASflag);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'mgh_scan_for_voxel_range':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:364:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
value = ntohl(((int *)data_ptr)[i]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:364:17: warning: conversion to 'float' from 'unsigned int' may alter its value [-Wconversion]
value = ntohl(((int *)data_ptr)[i]);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'initialize_mgh_format_input':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:572:41: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
in_ptr->generic_slice_buffer = malloc(n_voxels_in_slice * n_bytes_per_voxel);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'input_more_mgh_format_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:684:27: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
value = ntohl(((int *)data_ptr)[data_ind++]);
^
[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_nifti.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_nifti.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_find_data_range':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:20:20: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
#define CHUNK_SIZE 10240
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:55:24: note: in expansion of macro 'CHUNK_SIZE'
n_voxels_per_chunk = CHUNK_SIZE / nii_ptr->nbyper;
^~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:63:45: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
n_bytes_to_read = (nii_ptr->nvox - i) * nii_ptr->nbyper;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_image_to_minc_attributes':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:152:32: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
mnc_index_from_file[i] = i;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:158:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 0, 3) = -(nii_ptr->dx * nii_ptr->nx) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:159:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 1, 3) = -(nii_ptr->dy * nii_ptr->ny) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:160:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 2, 3) = -(nii_ptr->dz * nii_ptr->nz) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_skip_header':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:311:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
size_t filesize = nifti_get_filesize(nii_ptr->iname);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:320:12: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ioff = nii_ptr->iname_offset;
^~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:322:16: warning: conversion to 'long int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
znzseek(zfp, ioff, SEEK_SET);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'initialize_nifti_format_input':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:514:41: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
in_ptr->generic_slice_buffer = malloc(n_voxels_in_slice * nii_ptr->nbyper);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'input_more_nifti_format_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:567:25: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
n_bytes_per_slice = (in_ptr->sizes_in_file[0] *
^
[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_volume.c
[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/multidim_arrays.c
[ 57%] Linking C static library libminc2_static.a
/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1
/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libsrc2/minc2_error.c.o CMakeFiles/minc2_static.dir/libsrc/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/read_file_names.c.o CMakeFiles/minc2_static.dir/libsrc/ParseArgv.c.o CMakeFiles/minc2_static.dir/libsrc/restructure.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_error.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mgh.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_nifti.c.o
[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o
/usr/bin/ranlib libminc2_static.a
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target minc2_static
[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_volume.c
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c: In function 'add_minc_history':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc.c:767:33: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
new_history = alloc_string( old_att_length );
^~~~~~~~~~~~~~
[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/set_hyperslab.c
[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/volume_cache.c
[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2583:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2584:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2772:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real));
^
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths':
/<<PKGBUILDDIR>>/volume_io/Volumes/volumes.c:2805:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real));
^
[ 60%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:143:38: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:144:59: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:145:54: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:152:32: warning: conversion to 'long int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
file->sizes_in_file[d] = dimension_size[d];
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:178:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slices_count*=dimension_size[d];
^~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:178:23: warning: conversion to 'int' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
slices_count*=dimension_size[d];
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:180:38: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t));
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:181:51: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:202:55: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:371:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion]
irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mnc2.c:706:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
used_count[n_file_dims] = file->sizes_in_file[n_file_dims];
^~~~
[ 60%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:857:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
long_file_start[file_ind] = (long) file_start[file_ind];
^
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:858:37: warning: conversion to 'misize_t {aka long long unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
long_file_count[file_ind] = (long) file_count[file_ind];
^
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2':
/<<PKGBUILDDIR>>/volume_io/Volumes/output_mnc2.c:1217:73: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min);
^~~~
[ 61%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mgh.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mgh.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c
[ 61%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_nifti.c.o
/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -Dminc2_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_nifti.c.o -c /<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'swapFloat':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:92:16: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
sl.i = ntohl(sl.i);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:92:10: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
sl.i = ntohl(sl.i);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'input_next_slice':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:119:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
n_bytes_per_voxel = get_type_size(in_ptr->file_data_type);
^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:120:23: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
n_voxels_in_slice = (in_ptr->sizes_in_file[0] *
^
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'mgh_header_from_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:279:28: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->version = ntohl(hdr_ptr->version);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:279:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->version = ntohl(hdr_ptr->version);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:282:31: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->sizes[i] = ntohl(hdr_ptr->sizes[i]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:282:25: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->sizes[i] = ntohl(hdr_ptr->sizes[i]);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:284:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->type = ntohl(hdr_ptr->type);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:284:19: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->type = ntohl(hdr_ptr->type);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:285:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->dof = ntohl(hdr_ptr->dof);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:285:18: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->dof = ntohl(hdr_ptr->dof);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:286:26: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion]
hdr_ptr->goodRASflag = ntohs(hdr_ptr->goodRASflag);
^~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'mgh_scan_for_voxel_range':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:364:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
value = ntohl(((int *)data_ptr)[i]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:364:17: warning: conversion to 'float' from 'unsigned int' may alter its value [-Wconversion]
value = ntohl(((int *)data_ptr)[i]);
^~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'initialize_mgh_format_input':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:572:41: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
in_ptr->generic_slice_buffer = malloc(n_voxels_in_slice * n_bytes_per_voxel);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/arpa/inet.h:22:0,
from /<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:11:
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c: In function 'input_more_mgh_format_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_mgh.c:684:27: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
value = ntohl(((int *)data_ptr)[data_ind++]);
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_find_data_range':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:20:20: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
#define CHUNK_SIZE 10240
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:55:24: note: in expansion of macro 'CHUNK_SIZE'
n_voxels_per_chunk = CHUNK_SIZE / nii_ptr->nbyper;
^~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:63:45: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
n_bytes_to_read = (nii_ptr->nvox - i) * nii_ptr->nbyper;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_image_to_minc_attributes':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:152:32: warning: conversion to 'int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
mnc_index_from_file[i] = i;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:158:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 0, 3) = -(nii_ptr->dx * nii_ptr->nx) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:159:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 1, 3) = -(nii_ptr->dy * nii_ptr->ny) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:160:53: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
Transform_elem(mnc_xform, 2, 3) = -(nii_ptr->dz * nii_ptr->nz) / 2;
^
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'nifti_skip_header':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:311:23: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
size_t filesize = nifti_get_filesize(nii_ptr->iname);
^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:320:12: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ioff = nii_ptr->iname_offset;
^~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:322:16: warning: conversion to 'long int' from 'size_t {aka unsigned int}' may change the sign of the result [-Wsign-conversion]
znzseek(zfp, ioff, SEEK_SET);
^~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'initialize_nifti_format_input':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:514:41: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
in_ptr->generic_slice_buffer = malloc(n_voxels_in_slice * nii_ptr->nbyper);
^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c: In function 'input_more_nifti_format_file':
/<<PKGBUILDDIR>>/volume_io/Volumes/input_nifti.c:567:25: warning: conversion to 'size_t {aka unsigned int}' from 'long int' may change the sign of the result [-Wsign-conversion]
n_bytes_per_slice = (in_ptr->sizes_in_file[0] *
^
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /<<PKGBUILDDIR>>/testdir/vio_xfm_test/copy-xfm.c
[ 62%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -Dminc_io_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /<<PKGBUILDDIR>>/ezminc/minc_1_rw.cpp
/<<PKGBUILDDIR>>/testdir/minc_conversion.c: In function 'test2':
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:156:24: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:156:41: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:156:51: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c: In function 'test3':
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[i].length;
^~
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:263:24: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:263:41: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:263:51: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000.0f) + (j * 100.0f) + k;
^
/<<PKGBUILDDIR>>/testdir/minc_conversion.c: In function 'test4':
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:351:25: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
buffer=flt_ptr=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc_conversion.c:368:21: warning: conversion to 'float' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
float tmp = (i * 10000) + (j * 100) + k;
^
[ 62%] Linking C executable copy_xfm
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1
[ 63%] Linking C executable icv
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/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf -lm -ldl -lnetcdf
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 63%] Built target copy_xfm
make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color=
[ 63%] Built target icv
[ 63%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -Dminc_io_EXPORTS -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /<<PKGBUILDDIR>>/ezminc/minc_1_simple_rw.cpp
Scanning dependencies of target mincapi
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /<<PKGBUILDDIR>>/testdir/mincapi.c
[ 64%] Linking C executable minc_conversion
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/<<PKGBUILDDIR>>/testdir/mincapi.c: In function 'test3':
/<<PKGBUILDDIR>>/testdir/mincapi.c:209:11: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[i].length;
^~
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
/<<PKGBUILDDIR>>/testdir/mincapi.c: In function 'test4':
/<<PKGBUILDDIR>>/testdir/mincapi.c:269:11: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[i].length;
^~
/<<PKGBUILDDIR>>/testdir/mincapi.c:352:14: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
float tmp = (i * 10000) + (j * 100) + k;
^
/<<PKGBUILDDIR>>/testdir/mincapi.c: In function 'test5':
/<<PKGBUILDDIR>>/testdir/mincapi.c:409:9: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[TST_X].length;
^~
/<<PKGBUILDDIR>>/testdir/mincapi.c:410:9: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[TST_Y].length + YBOOST;
^~
/<<PKGBUILDDIR>>/testdir/mincapi.c:411:9: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[TST_Z].length + ZBOOST;
^~
/<<PKGBUILDDIR>>/testdir/mincapi.c: In function 'test7':
/<<PKGBUILDDIR>>/testdir/mincapi.c:644:11: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[i].length;
^~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target minc_conversion
make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-read-metadata
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-read-metadata.c
[ 65%] Linking C executable minc2-read-metadata
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target minc2-read-metadata
make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color=
Scanning dependencies of target minc_tst
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /<<PKGBUILDDIR>>/testdir/minc.c
[ 65%] Linking C executable mincapi
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/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
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[ 66%] Linking C executable minc_tst
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[ 66%] Built target mincapi
make -f testdir/CMakeFiles/minc2-dimension-test.dir/build.make testdir/CMakeFiles/minc2-dimension-test.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-dimension-test.dir/DependInfo.cmake --color=
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend
[ 67%] Building C object testdir/CMakeFiles/minc2-dimension-test.dir/minc2-dimension-test.c.o
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-dimension-test.dir/minc2-dimension-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /<<PKGBUILDDIR>>/testdir/icv_range.c
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c: In function 'check_dims':
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:38:48: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_dimension_offsets(dim[0], 1, i, &tmp);
^
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:161:48: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miset_dimension_offsets(dim[0], 1, i, &offset);
^
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:232:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:233:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:234:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[3] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-dimension-test.c:236:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
voxel = (i*10000)+(j*100)+k;
^
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target minc_tst
make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-vector_dimension-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-vector_dimension-test.c
/<<PKGBUILDDIR>>/testdir/minc2-vector_dimension-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-vector_dimension-test.c:130:17: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[3] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-vector_dimension-test.c:165:17: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
[ 68%] Linking C executable icv_range
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 68%] Linking C executable minc2-vector_dimension-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 68%] Linking C executable minc2-dimension-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-dimension-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-dimension-test.dir/minc2-dimension-test.c.o -o minc2-dimension-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target icv_range
make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc_long_attr
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target minc2-vector_dimension-test
make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color=
[ 68%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /<<PKGBUILDDIR>>/testdir/minc_long_attr.c
Scanning dependencies of target minc2-hyper-test-2
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target minc2-dimension-test
make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color=
[ 68%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-hyper-test-2.c
Scanning dependencies of target test_mconv
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /<<PKGBUILDDIR>>/testdir/test_mconv.c
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c: In function 'test1':
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c:125:30: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
ip->large_attribute=calloc(ip->attribute_size,sizeof(char));
^~
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c:126:34: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
memset(ip->large_attribute,'X',ip->attribute_size-1);
^~
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c: In function 'test3':
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c:206:11: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
total *= dims[i].length;
^~
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c:256:14: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
att=malloc(att_length);
^~~~~~~~~~
/<<PKGBUILDDIR>>/testdir/minc_long_attr.c:261:37: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
if(memcmp(att,ip->large_attribute,att_length)!=0)
^~~~~~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test-2.c: In function 'create_test_file':
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test-2.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test-2.c:145:34: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) );
^~~~~
[ 69%] Linking C executable test_mconv
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 70%] Linking C executable minc2-hyper-test-2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target test_mconv
make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color=
[ 71%] Linking C executable minc_long_attr
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
Scanning dependencies of target minc_types
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /<<PKGBUILDDIR>>/testdir/minc_types.c
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[ 71%] Built target minc2-hyper-test-2
make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color=
Scanning dependencies of target icv_vec
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /<<PKGBUILDDIR>>/testdir/icv_vec.c
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target minc_long_attr
make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-multires-test
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-multires-test.c
[ 74%] Linking C executable minc_types
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
/<<PKGBUILDDIR>>/testdir/icv_vec.c: In function 'test_icv_vector':
/<<PKGBUILDDIR>>/testdir/icv_vec.c:65:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
short int *ivalue = malloc(N_ELEMENTS * sizeof(short int));
^
/<<PKGBUILDDIR>>/testdir/icv_vec.c:66:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
double *dvalue = malloc(N_ELEMENTS * sizeof(double));
^
/<<PKGBUILDDIR>>/testdir/icv_vec.c:41:24: warning: conversion to 'short int' from 'int' may alter its value [-Wconversion]
#define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v))
^
/<<PKGBUILDDIR>>/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL'
ivalue[c] = TVAL(i, j, k, v);
^~~~
/<<PKGBUILDDIR>>/testdir/minc2-multires-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-multires-test.c:80:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-multires-test.c:81:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
voxel = i*10000 + j*100 + k;
^
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target minc_types
make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-create-test-images-2
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c
[ 75%] Linking C executable minc2-multires-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image':
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image':
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c:142:17: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
buf[i] = i * 0.001f;
^
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images-2.c:153:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target minc2-multires-test
make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend
[ 75%] Linking C executable icv_vec
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
Scanning dependencies of target icv_dim1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /<<PKGBUILDDIR>>/testdir/icv_dim1.c
[ 75%] Linking C executable minc2-create-test-images-2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target icv_vec
make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target icv_dim
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target minc2-create-test-images-2
make -f testdir/CMakeFiles/nifti_test.dir/build.make testdir/CMakeFiles/nifti_test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/nifti_test.dir/DependInfo.cmake --color=
[ 75%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /<<PKGBUILDDIR>>/testdir/icv_dim.c
[ 76%] Linking C executable icv_dim1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1
Scanning dependencies of target nifti_test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/nifti_test.dir/build.make testdir/CMakeFiles/nifti_test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 77%] Building C object testdir/CMakeFiles/nifti_test.dir/nifti_test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/nifti_test.dir/nifti_test.c.o -c /<<PKGBUILDDIR>>/testdir/nifti_test.c
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/<<PKGBUILDDIR>>/testdir/nifti_test.c: In function 'generate_reference_image':
/<<PKGBUILDDIR>>/testdir/nifti_test.c:100:27: warning: conversion to 'short int' from 'int' may alter its value [-Wconversion]
reference_header.bitpix=nbyper*8;
^~~~~~
/<<PKGBUILDDIR>>/testdir/nifti_test.c:105:32: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
const unsigned int NumVoxels=reference_image->nx*reference_image->ny*reference_image->nz*reference_image->nt*reference_image->nu;
^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/testdir/nifti_test.c: In function 'compare_reference_image_values':
/<<PKGBUILDDIR>>/testdir/nifti_test.c:142:32: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
const unsigned int NumVoxels=reference_image->nx*reference_image->ny*reference_image->nz*reference_image->nt*reference_image->nu;
^~~~~~~~~~~~~~~
[ 77%] Built target icv_dim1
make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color=
/<<PKGBUILDDIR>>/testdir/nifti_test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/nifti_test.c:642:37: warning: conversion to 'float' alters 'double' constant value [-Wfloat-conversion]
mat44 x = nifti_make_orthog_mat44(0.14,0.0,0.0,
^~~~
/<<PKGBUILDDIR>>/testdir/nifti_test.c:643:41: warning: conversion to 'float' alters 'double' constant value [-Wfloat-conversion]
0.0,0.9,0.0,
^~~
/<<PKGBUILDDIR>>/testdir/nifti_test.c:644:45: warning: conversion to 'float' alters 'double' constant value [-Wfloat-conversion]
0.0,0.0,1.1);
^~~
[ 78%] Linking C executable icv_dim
Scanning dependencies of target icv_fillvalue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 78%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /<<PKGBUILDDIR>>/testdir/icv_fillvalue.c
In file included from /usr/include/c++/7/vector:69:0,
from /<<PKGBUILDDIR>>/ezminc/minc_1_rw.h:18,
from /<<PKGBUILDDIR>>/ezminc/minc_1_rw.cpp:23:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target icv_dim
make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/7/vector:64:0,
from /<<PKGBUILDDIR>>/ezminc/minc_1_rw.h:18,
from /<<PKGBUILDDIR>>/ezminc/minc_1_rw.cpp:23:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Scanning dependencies of target verify_xfm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /<<PKGBUILDDIR>>/testdir/vio_xfm_test/verify_xfm.c
[ 78%] Linking C executable icv_fillvalue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target icv_fillvalue
make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color=
Scanning dependencies of target test_arg_parse
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o
[ 80%] Linking C executable verify_xfm
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /<<PKGBUILDDIR>>/testdir/test_arg_parse.c
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf -lm -ldl -lnetcdf
[ 81%] Linking CXX shared library libminc_io.so
[ 81%] Linking C executable test_arg_parse
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.4.0.0 -o libminc_io.so.4.0.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target verify_xfm
make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-convert-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-convert-test.c
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.4.0.0 libminc_io.so.4.0.0 libminc_io.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target test_arg_parse
make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color=
[ 81%] Built target minc_io
make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-create-test-images
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make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc2-hyper-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:98:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:99:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:101:28: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
voxel[0] = coords[0];
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:102:28: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
voxel[1] = coords[1];
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-convert-test.c:103:28: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
voxel[2] = coords[2];
^~~~~~
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c
[ 82%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c: In function 'create_3D_image':
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c:135:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c: In function 'create_4D_image':
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c:207:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-create-test-images.c:209:18: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c: In function 'create_and_test_image':
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion]
stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP));
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:262:20: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:263:20: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c: In function 'test1':
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:393:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion]
short t = stemp[i][j][k];
^~~~~
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:418:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion]
short t = stemp[i][j][k] ^ 0x5555;
^~~~~
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:424:38: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion]
stemp[i][j][k] = t;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion]
short t = stmp2[i][j][k];
^~~~~
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c: In function 'test3':
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[2] = k;
^
[ 82%] Linking C executable minc2-convert-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 82%] Linking C executable minc2-create-test-images
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 82%] Linking C executable nifti_test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/nifti_test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/nifti_test.dir/nifti_test.c.o -o nifti_test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target minc2-convert-test
make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target minc2-create-test-images
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target test_xfm
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make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target nifti_test
make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend
[ 83%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /<<PKGBUILDDIR>>/testdir/vio_xfm_test/test-xfm.c
Scanning dependencies of target minc2-datatype-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc2-large-attribute
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-datatype-test.c
[ 85%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c
/<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c: In function 'create_3D_image':
/<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
start[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c:90:20: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
attribute=malloc(attribute_size);
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c:91:24: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
memset(attribute,'Z',attribute_size-1);
^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t {aka unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute);
^~~~~~~~~~~~~~
[ 85%] Linking C executable minc2-datatype-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 85%] Linking C executable test_xfm
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1
[ 85%] Linking C executable minc2-large-attribute
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf -lm -ldl -lnetcdf
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target minc2-datatype-test
make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc2-record-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target minc2-large-attribute
make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color=
[ 85%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-record-test.c
[ 85%] Built target test_xfm
make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-full-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc2-grpattr-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-full-test.c
[ 85%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-grpattr-test.c
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:86:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:87:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:105:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:106:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c: In function 'test1':
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:107:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:108:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:109:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c: In function 'test2':
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:210:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:211:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:212:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:214:30: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
fcmpl.real = (i * 100) + j;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:215:30: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
fcmpl.imag = k;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:232:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:233:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-full-test.c:234:29: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
[ 86%] Linking C executable minc2-record-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 87%] Linking C executable minc2-hyper-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 88%] Linking C executable minc2-full-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target minc2-record-test
make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-label-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-label-test.c
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Linking C executable minc2-grpattr-test
[ 89%] Built target minc2-full-test
[ 89%] Built target minc2-hyper-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1
make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend
make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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/<<PKGBUILDDIR>>/testdir/minc2-label-test.c: In function 'create_label_image':
/<<PKGBUILDDIR>>/testdir/minc2-label-test.c:109:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = j;
^
/<<PKGBUILDDIR>>/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = k;
^
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
Scanning dependencies of target create_grid_xfm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /<<PKGBUILDDIR>>/testdir/create_grid_xfm.c
[ 90%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-slice-test.c
/<<PKGBUILDDIR>>/testdir/minc2-slice-test.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-slice-test.c:20:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[0] = i;
^
/<<PKGBUILDDIR>>/testdir/minc2-slice-test.c:21:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[1] = rand();
^~~~
/<<PKGBUILDDIR>>/testdir/minc2-slice-test.c:22:21: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
coords[2] = rand();
^~~~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target minc2-grpattr-test
make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color=
[ 91%] Linking C executable minc2-slice-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1
Scanning dependencies of target minc2-volprops-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 91%] Linking C executable create_grid_xfm
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1
[ 92%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-volprops-test.c
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf -lm -ldl -lnetcdf
[ 92%] Linking C executable minc2-label-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target minc2-slice-test
make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target create_grid_xfm
make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color=
Scanning dependencies of target minc2-valid-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target minc2-read-rgb
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build
[ 92%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-valid-test.c
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Linking C executable minc2-volprops-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1
[ 92%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target minc2-label-test
make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color=
Scanning dependencies of target trilinear_resample
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c: In function 'calculate_mean_f':
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:23:13: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
return avg/length;
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c: In function 'calculate_mean_s':
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:33:13: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
return avg/length;
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c: In function 'calculate_mean_d':
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:43:13: warning: conversion to 'double' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
return avg/length;
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c: In function 'main':
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:119:37: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
dim= malloc(sizeof(midimhandle_t)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:120:32: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
sizes=malloc(sizeof(misize_t)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:121:32: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
start=malloc(sizeof(misize_t)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:122:32: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
count=malloc(sizeof(misize_t)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:123:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
howfar=malloc(sizeof(misize_t)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:124:31: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
origin=malloc(sizeof(double)*ndim);
^
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:125:29: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion]
step=malloc(sizeof(double)*ndim);
^
[ 92%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:135:36: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_dimension_sizes ( dim, ndim, sizes );
^~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:140:53: warning: conversion to 'misize_t {aka long long unsigned int}' from 'int' may change the sign of the result [-Wsign-conversion]
r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step);
^~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:203:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]);
^~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:230:20: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:244:23: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:256:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:268:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:286:20: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:298:23: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:311:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]*my_count[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:322:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]*my_sizes[3]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:372:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_full=malloc(sizeof(float)*my_sizes[0]*my_sizes[1]*my_sizes[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:390:20: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_axial=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:404:23: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_sagittal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:416:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
f_coronal=malloc(sizeof(float)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:435:20: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_axial=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:438:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_full=malloc(sizeof(short)*my_sizes[0]*my_sizes[1]*my_sizes[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:457:23: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_sagittal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:470:22: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
s_coronal=malloc(sizeof(short)*my_count[0]*my_count[1]*my_count[2]);
^~~~~~
/<<PKGBUILDDIR>>/testdir/minc2-read-rgb.c:481:19: warning: conversion to 'size_t {aka unsigned int}' from 'misize_t {aka long long unsigned int}' may alter its value [-Wconversion]
d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]);
^~~~~~
[ 93%] Linking C executable minc2-valid-test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
[ 93%] Built target minc2-volprops-test
make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color=
Scanning dependencies of target volume_msq_dist
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /<<PKGBUILDDIR>>/ezminc/examples/volume_msq_dist.cpp
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target minc2-valid-test
make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color=
Scanning dependencies of target create_grid_file
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp
[ 95%] Linking C executable minc2-read-rgb
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1
/usr/bin/cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -ldl -lm -lrt -lniftiio -lnifticdf -lznz -lm -ldl -lnetcdf
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)':
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
old_step[i-1]=new_info[rdr.map_space(i)].step;
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
old_start[i-1]=new_info[rdr.map_space(i)].start;
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion to 'float' from 'size_t {aka unsigned int}' may alter its value [-Wconversion]
float len=(new_info[rdr.map_space(i)].length)*old_step[i-1];
~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
new_start[i-1]=new_info[rdr.map_space(i)].start;
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion to 'size_t {aka unsigned int}' from 'double' may alter its value [-Wfloat-conversion]
new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step));
~~~~^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
minc::fixed_vec<3,float> cc=IDX<float>(x*_step,y*_step,z*_step);
~^~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
minc::fixed_vec<3,float> cc=IDX<float>(x*_step,y*_step,z*_step);
~^~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
minc::fixed_vec<3,float> cc=IDX<float>(x*_step,y*_step,z*_step);
~^~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2]));
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /<<PKGBUILDDIR>>/ezminc/minc_1_simple_rw.h:19:0,
from /<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:18:
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume<T>::interpolate(float, float, float) const [with T = float]':
/<<PKGBUILDDIR>>/ezminc/examples/trilinear_resample.cpp:115:71: required from here
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:327:23: warning: conversion to 'size_t {aka unsigned int}' from 'float' may alter its value [-Wfloat-conversion]
size_t x=floor(_x);
~~~~~^~~~
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:328:23: warning: conversion to 'size_t {aka unsigned int}' from 'float' may alter its value [-Wfloat-conversion]
size_t y=floor(_y);
~~~~~^~~~
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:329:23: warning: conversion to 'size_t {aka unsigned int}' from 'float' may alter its value [-Wfloat-conversion]
size_t z=floor(_z);
~~~~~^~~~
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:331:20: warning: conversion to 'float' from 'size_t {aka unsigned int}' may alter its value [-Wconversion]
float dx=_x-x;
~~^~
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:332:20: warning: conversion to 'float' from 'size_t {aka unsigned int}' may alter its value [-Wconversion]
float dy=_y-y;
~~^~
/<<PKGBUILDDIR>>/ezminc/minc_io_simple_volume.h:333:20: warning: conversion to 'float' from 'size_t {aka unsigned int}' may alter its value [-Wconversion]
float dz=_z-z;
~~^~
[ 95%] Built target minc2-read-rgb
make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color=
Scanning dependencies of target volume_avg
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /<<PKGBUILDDIR>>/ezminc/examples/volume_avg.cpp
/<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)':
/<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
def[0]=amp*sin(M_PI*pos[0]/100.0);
~~~^~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
def[1]=amp*sin(2*M_PI*pos[1]/100.0);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion to 'float' from 'double' may alter its value [-Wfloat-conversion]
def[2]=amp*cos(3*M_PI*pos[2]/100.0);
~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /<<PKGBUILDDIR>>/ezminc/minc_1_rw.h:18,
from /<<PKGBUILDDIR>>/ezminc/minc_1_simple.h:18,
from /<<PKGBUILDDIR>>/ezminc/examples/create_grid_file.cpp:5:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {minc::dim_info}; _Tp = minc::dim_info; _Alloc = std::allocator<minc::dim_info>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<minc::dim_info>::iterator {aka __gnu_cxx::__normal_iterator<minc::dim_info*, std::vector<minc::dim_info> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)':
/<<PKGBUILDDIR>>/ezminc/examples/volume_avg.cpp:128:47: warning: conversion to 'float' from 'int' may alter its value [-Wconversion]
_sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] );
~~~~~^~~
[ 96%] Linking CXX executable volume_msq_dist
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 -lniftiio -lnifticdf -lznz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lrt -lm -ldl -lnetcdf
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {minc::dim_info}; _Tp = minc::dim_info; _Alloc = std::allocator<minc::dim_info>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<minc::dim_info*, std::vector<minc::dim_info> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target volume_msq_dist
make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color=
Scanning dependencies of target ezminc_rw_test2
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /<<PKGBUILDDIR>>/ezminc/tests/minc_rw_test2.cpp
[ 97%] Linking CXX executable trilinear_resample
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 -lniftiio -lnifticdf -lznz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lrt -lm -ldl -lnetcdf
[ 97%] Linking CXX executable create_grid_file
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 -lniftiio -lnifticdf -lznz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lrt -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target trilinear_resample
make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color=
Scanning dependencies of target ezminc_rw_test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -I/<<PKGBUILDDIR>>/libsrc2 -I/<<PKGBUILDDIR>>/libsrc -I/<<PKGBUILDDIR>>/volume_io/Include -I/<<PKGBUILDDIR>>/ezminc -I/usr/include/hdf5/serial -I/usr/include/nifti -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp
/<<PKGBUILDDIR>>/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)':
/<<PKGBUILDDIR>>/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion to 'float' from 'size_t {aka unsigned int}' may alter its value [-Wconversion]
vol(x,y,z)=x+y+z;
~~~^~
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target create_grid_file
[ 99%] Linking CXX executable volume_avg
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 -lniftiio -lnifticdf -lznz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lrt -lm -ldl -lnetcdf
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]':
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:180:68: required from here
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<unsigned char> >::value_type {aka unsigned char}' from 'double' may alter its value [-Wfloat-conversion]
buffer[i]=static_cast<TPixel>(random())*100.0/RAND_MAX;
^
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<short int> >::value_type {aka short int}' from 'int' may alter its value [-Wconversion]
short_attr[i]=i;
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]':
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:183:55: required from here
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<int> >::value_type {aka int}' from 'double' may alter its value [-Wfloat-conversion]
buffer[i]=static_cast<TPixel>(random())*100.0/RAND_MAX;
^
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<short int> >::value_type {aka short int}' from 'int' may alter its value [-Wconversion]
short_attr[i]=i;
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]':
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:186:61: required from here
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<float> >::value_type {aka float}' from 'double' may alter its value [-Wfloat-conversion]
buffer[i]=static_cast<TPixel>(random())*100.0/RAND_MAX;
^
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<short int> >::value_type {aka short int}' from 'int' may alter its value [-Wconversion]
short_attr[i]=i;
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]':
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:189:64: required from here
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion to '__gnu_cxx::__alloc_traits<std::allocator<short int> >::value_type {aka short int}' from 'int' may alter its value [-Wconversion]
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target volume_avg
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp: In function 'int main(int, char**)':
/<<PKGBUILDDIR>>/ezminc/tests/ezminc_rw_test.cpp:176:12: warning: ignoring return value of 'int chdir(const char*)', declared with attribute warn_unused_result [-Wunused-result]
chdir(argv[1]);
~~~~~^~~~~~~~~
[100%] Linking CXX executable ezminc_rw_test2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -lniftiio -lnifticdf -lznz -ldl -lm -lrt -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target ezminc_rw_test2
[100%] Linking CXX executable ezminc_rw_test
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.4.0.0 ../../libminc2.so.4.0.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lm -ldl -lnetcdf -lniftiio -lnifticdf -lznz -ldl -lm -lrt -lm -ldl -lnetcdf
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target ezminc_rw_test
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test --no-parallel
cd obj-arm-linux-gnueabihf && make -j1 test ARGS\+=-j1
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j1
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Start 1: ezminc_rw_test
1/51 Test #1: ezminc_rw_test ................... Passed 0.22 sec
Start 2: minc_types-1
2/51 Test #2: minc_types-1 ..................... Passed 0.17 sec
Start 3: minc_types-2
3/51 Test #3: minc_types-2 ..................... Passed 2.57 sec
Start 4: icv_dim1-1
4/51 Test #4: icv_dim1-1 ....................... Passed 0.09 sec
Start 5: icv_dim1-2
5/51 Test #5: icv_dim1-2 ....................... Passed 0.16 sec
Start 6: icv_dim-1
6/51 Test #6: icv_dim-1 ........................ Passed 0.09 sec
Start 7: icv_dim-2
7/51 Test #7: icv_dim-2 ........................ Passed 0.18 sec
Start 8: icv_fillvalue-1
8/51 Test #8: icv_fillvalue-1 .................. Passed 0.09 sec
Start 9: icv_fillvalue-2
9/51 Test #9: icv_fillvalue-2 .................. Passed 0.12 sec
Start 10: icv_range-1
10/51 Test #10: icv_range-1 ...................... Passed 0.14 sec
Start 11: icv_range-2
11/51 Test #11: icv_range-2 ...................... Passed 1.23 sec
Start 12: arg_parse
12/51 Test #12: arg_parse ........................ Passed 1.25 sec
Start 13: icv
13/51 Test #13: icv .............................. Passed 0.12 sec
Start 14: icv_vec
14/51 Test #14: icv_vec .......................... Passed 0.09 sec
Start 15: minc
15/51 Test #15: minc ............................. Passed 0.07 sec
Start 16: mincapi
16/51 Test #16: mincapi .......................... Passed 0.42 sec
Start 17: test_mconv
17/51 Test #17: test_mconv ....................... Passed 0.07 sec
Start 18: minc_long_attr_10k
18/51 Test #18: minc_long_attr_10k ............... Passed 0.52 sec
Start 19: minc_long_attr_100k
19/51 Test #19: minc_long_attr_100k .............. Passed 0.70 sec
Start 20: minc_long_attr_1m
20/51 Test #20: minc_long_attr_1m ................ Passed 0.44 sec
Start 21: minc_conversion
21/51 Test #21: minc_conversion .................. Passed 0.48 sec
Start 22: nifti_test-1
22/51 Test #22: nifti_test-1 ..................... Passed 1.26 sec
Start 23: test_xfm_1
23/51 Test #23: test_xfm_1 ....................... Passed 0.07 sec
Start 24: test_xfm_2
24/51 Test #24: test_xfm_2 ....................... Passed 0.07 sec
Start 25: test_xfm_3
25/51 Test #25: test_xfm_3 ....................... Passed 0.20 sec
Start 26: copy_xfm
26/51 Test #26: copy_xfm ......................... Passed 0.17 sec
Start 27: verify_xfm_1
27/51 Test #27: verify_xfm_1 ..................... Passed 0.11 sec
Start 28: verify_xfm_float
28/51 Test #28: verify_xfm_float ................. Passed 0.10 sec
Start 29: verify_xfm_short
29/51 Test #29: verify_xfm_short ................. Passed 0.13 sec
Start 30: verify_xfm_byte
30/51 Test #30: verify_xfm_byte .................. Passed 0.13 sec
Start 31: verify_xfm_2
31/51 Test #31: verify_xfm_2 ..................... Passed 0.15 sec
Start 32: test_arg_parse
32/51 Test #32: test_arg_parse ................... Passed 0.08 sec
Start 33: minc2-convert-test
33/51 Test #33: minc2-convert-test ............... Passed 91.15 sec
Start 34: minc2-create-test-images-2
34/51 Test #34: minc2-create-test-images-2 ....... Passed 0.58 sec
Start 35: minc2-create-test-images
35/51 Test #35: minc2-create-test-images ......... Passed 0.22 sec
Start 36: minc2-large-attribute-10k
36/51 Test #36: minc2-large-attribute-10k ........ Passed 0.14 sec
Start 37: minc2-large-attribute-100k
37/51 Test #37: minc2-large-attribute-100k ....... Passed 0.15 sec
Start 38: minc2-large-attribute-1m
38/51 Test #38: minc2-large-attribute-1m ......... Passed 0.18 sec
Start 39: minc2-datatype-test
39/51 Test #39: minc2-datatype-test .............. Passed 0.06 sec
Start 40: minc2-dimension-test
40/51 Test #40: minc2-dimension-test ............. Passed 0.34 sec
Start 41: minc2-full-test
41/51 Test #41: minc2-full-test .................. Passed 369.72 sec
Start 42: minc2-grpattr-test
42/51 Test #42: minc2-grpattr-test ............... Passed 0.13 sec
Start 43: minc2-hyper-test-2
43/51 Test #43: minc2-hyper-test-2 ............... Passed 0.64 sec
Start 44: minc2-hyper-test
44/51 Test #44: minc2-hyper-test ................. Passed 0.25 sec
Start 45: minc2-label-test
45/51 Test #45: minc2-label-test ................. Passed 0.13 sec
Start 46: minc2-multires-test
46/51 Test #46: minc2-multires-test .............. Passed 61.49 sec
Start 47: minc2-record-test
47/51 Test #47: minc2-record-test ................ Passed 0.47 sec
Start 48: minc2-slice-test
48/51 Test #48: minc2-slice-test ................. Passed 0.06 sec
Start 49: minc2-valid-test
49/51 Test #49: minc2-valid-test ................. Passed 0.06 sec
Start 50: minc2-vector_dimension-test
50/51 Test #50: minc2-vector_dimension-test ...... Passed 5.27 sec
Start 51: minc2-volprops-test
51/51 Test #51: minc2-volprops-test .............. Passed 0.06 sec
100% tests passed, 0 tests failed out of 51
Total Test time (real) = 542.92 sec
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend
make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build
make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'CMakeFiles/minc2.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'CMakeFiles/minc2_static.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target minc2_static
[ 62%] Built target minc2
make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend
make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend
make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend
make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build
make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_conversion.dir/build'.
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/CMakeFiles/minc_io.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/copy_xfm.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target icv
make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend
[ 64%] Built target minc_io
[ 65%] Built target minc_conversion
make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend
make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color=
[ 65%] Built target copy_xfm
make -f testdir/CMakeFiles/minc2-dimension-test.dir/build.make testdir/CMakeFiles/minc2-dimension-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-dimension-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build
make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/mincapi.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_tst.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-dimension-test.dir/build.make testdir/CMakeFiles/minc2-dimension-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-metadata.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-dimension-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target mincapi
make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend
[ 67%] Built target minc_tst
[ 67%] Built target minc2-read-metadata
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color=
make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend
make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color=
[ 68%] Built target minc2-dimension-test
make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build
make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-vector_dimension-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_long_attr.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_range.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test-2.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target minc_long_attr
make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color=
[ 70%] Built target icv_range
[ 70%] Built target minc2-vector_dimension-test
make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend
make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color=
[ 71%] Built target minc2-hyper-test-2
make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/test_mconv.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_vec.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_types.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-multires-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target test_mconv
make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color=
[ 73%] Built target icv_vec
make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend
[ 74%] Built target minc_types
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color=
make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend
[ 75%] Built target minc2-multires-test
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color=
make -f testdir/CMakeFiles/nifti_test.dir/build.make testdir/CMakeFiles/nifti_test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/nifti_test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images-2.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim1.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/nifti_test.dir/build.make testdir/CMakeFiles/nifti_test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/nifti_test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target minc2-create-test-images-2
make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color=
[ 77%] Built target icv_dim1
make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend
[ 79%] Built target nifti_test
[ 79%] Built target icv_dim
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color=
make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend
make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_fillvalue.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/verify_xfm.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-convert-test.dir/build'.
make[3]: Nothing to be done for 'testdir/CMakeFiles/test_arg_parse.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target icv_fillvalue
make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color=
[ 80%] Built target verify_xfm
make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend
[ 81%] Built target minc2-convert-test
[ 81%] Built target test_arg_parse
make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend
make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/test_xfm.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-datatype-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target minc2-create-test-images
make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color=
[ 83%] Built target test_xfm
make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend
[ 84%] Built target minc2-hyper-test
make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color=
[ 85%] Built target minc2-datatype-test
make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-large-attribute.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-record-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build
[ 86%] Built target minc2-large-attribute
make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-full-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-grpattr-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target minc2-record-test
make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color=
[ 88%] Built target minc2-full-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build
make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend
[ 89%] Built target minc2-grpattr-test
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color=
make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-label-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build
[ 89%] Built target minc2-label-test
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build
make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/create_grid_xfm.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-slice-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-volprops-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target create_grid_xfm
make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend
[ 91%] Built target minc2-slice-test
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color=
make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color=
[ 92%] Built target minc2-volprops-test
make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-valid-test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target minc2-valid-test
make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build
make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-rgb.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/trilinear_resample.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_msq_dist.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target minc2-read-rgb
make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend
[ 95%] Built target trilinear_resample
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color=
make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/create_grid_file.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target volume_msq_dist
make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build
[ 97%] Built target create_grid_file
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_avg.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target volume_avg
[ 99%] Built target ezminc_rw_test2
[100%] Built target ezminc_rw_test
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.so
-- Set runtime path of "/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0" to ""
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc2_defs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc2_structs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc2_api.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc2_error.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/time_stamp.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/ParseArgv.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/read_file_names.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/restructure.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/voxel_loop.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/nd_loop.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_compat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_simple.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_format_convert.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/alloc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/arrays.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/basic.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/def_math.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/files.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/geom_structs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/geometry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/multidim.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/progress.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/string_funcs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/system_dependent.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/transforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/vol_io_prototypes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/volume.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/volume_io/volume_cache.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/UseLIBMINC.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/LIBMINCConfig.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc_io.so
-- Set runtime path of "/<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0" to ""
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_io_exceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_io_fixed_vector.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_io_simple_volume.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_1_rw.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_1_simple.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_1_simple_rw.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/minc_io_4d_volume.h
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -plibminc2-4.0.0 --autodest debian/tmp/usr/lib/*/lib*.so.*
dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.so
dh_install -plibminc-dev debian/tmp/usr/lib/*/*.cmake /usr/lib/arm-linux-gnueabihf/cmake/LIBMINC
dh_install -plibminc-dev --autodest debian/tmp/usr/include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0 found in none of the libraries
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0 debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0 were not linked against libnifticdf.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0 debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0 were not linked against libdl.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0 debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0 were not linked against libsz.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0 debian/libminc2-4.0.0/usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0 were not linked against libz.so.1 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libminc2-4.0.0' in '../libminc2-4.0.0_2.3.00-5_armhf.deb'.
dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.3.00-5_armhf.deb'.
dpkg-deb: building package 'libminc2-4.0.0-dbgsym' in '../libminc2-4.0.0-dbgsym_2.3.00-5_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libminc_2.3.00-5_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build libminc-2.3.00
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-02-14T14:46:26Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libminc_2.3.00-5_armhf.changes:
-------------------------------
Format: 1.8
Date: Thu, 08 Feb 2018 14:50:07 +0100
Source: libminc
Binary: libminc2-4.0.0 libminc-dev
Architecture: armhf
Version: 2.3.00-5
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Gert Wollny <gewo@debian.org>
Description:
libminc-dev - MNI medical image format development environment
libminc2-4.0.0 - MNI medical image format library
Closes: 888925
Changes:
libminc (2.3.00-5) unstable; urgency=medium
.
* Team upload
* d/p/net..:Strip MINC flag from nccreate call, Closes: #888925
Checksums-Sha1:
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be691bc1aceabe9b1baaa1f9ab2e90ffa5832d58 197348 libminc2-4.0.0_2.3.00-5_armhf.deb
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Checksums-Sha256:
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Files:
773442dbed43c515200f4b74ac2fb3b4 71376 libdevel optional libminc-dev_2.3.00-5_armhf.deb
6d47a9fb526f58ac7b3531d85c598776 645896 debug optional libminc2-4.0.0-dbgsym_2.3.00-5_armhf.deb
9c38942530d7a75ae723e50591e5a7c6 197348 libs optional libminc2-4.0.0_2.3.00-5_armhf.deb
0ea5c0df5ce05af680869949522e01d8 6186 science optional libminc_2.3.00-5_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libminc-dev_2.3.00-5_armhf.deb
------------------------------
new Debian package, version 2.0.
size 71376 bytes: control archive=2152 bytes.
1208 bytes, 27 lines control
2840 bytes, 43 lines md5sums
Package: libminc-dev
Source: libminc
Version: 2.3.00-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 388
Depends: libminc2-4.0.0 (= 2.3.00-5), libnetcdf-dev, libhdf5-dev
Conflicts: libminc0-dev
Replaces: libminc0-dev
Section: libdevel
Priority: optional
Homepage: https://github.com/BIC-MNI/libminc
Description: MNI medical image format development environment
This package contains the library and headers for libminc2 and
libminc_io.
.
The Minc file format is a highly flexible medical image file format.
Minc version 1 is built on top of the NetCDF generalized data format.
Minc version 2 is built on top of the HDF data format. This library
handles both formats. In each case the format is
simple, self-describing, extensible, portable and N-dimensional, with
programming interfaces for both low-level data access and high-level
volume manipulation. On top of the libraries is a suite of generic
image-file manipulation tools. The format, libraries and tools are
designed for use in a medical-imaging research environment : they are
simple and powerful and make no attempt to provide a pretty interface
to users.
drwxr-xr-x root/root 0 2018-02-08 13:50 ./
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/include/
-rw-r--r-- root/root 2494 2015-09-11 19:04 ./usr/include/ParseArgv.h
-rw-r--r-- root/root 25164 2018-02-08 13:50 ./usr/include/minc.h
-rw-r--r-- root/root 257 2015-09-11 19:04 ./usr/include/minc2.h
-rw-r--r-- root/root 54517 2015-09-11 19:04 ./usr/include/minc2_api.h
-rw-r--r-- root/root 14951 2015-09-11 19:04 ./usr/include/minc2_defs.h
-rw-r--r-- root/root 3557 2015-09-11 19:04 ./usr/include/minc2_error.h
-rw-r--r-- root/root 6953 2015-09-11 19:04 ./usr/include/minc2_structs.h
-rw-r--r-- root/root 13925 2015-09-11 19:04 ./usr/include/minc_1_rw.h
-rw-r--r-- root/root 7736 2015-09-11 19:04 ./usr/include/minc_1_simple.h
-rw-r--r-- root/root 10048 2015-09-11 19:04 ./usr/include/minc_1_simple_rw.h
-rw-r--r-- root/root 2978 2015-09-11 19:04 ./usr/include/minc_compat.h
-rw-r--r-- root/root 988 2015-09-11 19:04 ./usr/include/minc_format_convert.h
-rw-r--r-- root/root 3814 2015-09-11 19:04 ./usr/include/minc_io_4d_volume.h
-rw-r--r-- root/root 1679 2015-09-11 19:04 ./usr/include/minc_io_exceptions.h
-rw-r--r-- root/root 8993 2015-09-11 19:04 ./usr/include/minc_io_fixed_vector.h
-rw-r--r-- root/root 16161 2015-09-11 19:04 ./usr/include/minc_io_simple_volume.h
-rw-r--r-- root/root 3194 2015-09-11 19:04 ./usr/include/minc_simple.h
-rw-r--r-- root/root 2942 2015-09-11 19:04 ./usr/include/nd_loop.h
-rw-r--r-- root/root 785 2015-09-11 19:04 ./usr/include/read_file_names.h
-rw-r--r-- root/root 387 2015-09-11 19:04 ./usr/include/restructure.h
-rw-r--r-- root/root 2122 2015-09-11 19:04 ./usr/include/time_stamp.h
-rw-r--r-- root/root 2062 2015-09-11 19:04 ./usr/include/volume_io.h
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/include/volume_io/
-rw-r--r-- root/root 11004 2015-09-11 19:04 ./usr/include/volume_io/alloc.h
-rw-r--r-- root/root 6763 2015-09-11 19:04 ./usr/include/volume_io/arrays.h
-rw-r--r-- root/root 5006 2015-09-11 19:04 ./usr/include/volume_io/basic.h
-rw-r--r-- root/root 1007 2015-09-11 19:04 ./usr/include/volume_io/def_math.h
-rw-r--r-- root/root 1617 2015-09-11 19:04 ./usr/include/volume_io/files.h
-rw-r--r-- root/root 8342 2015-09-11 19:04 ./usr/include/volume_io/geom_structs.h
-rw-r--r-- root/root 8978 2015-09-11 19:04 ./usr/include/volume_io/geometry.h
-rw-r--r-- root/root 11723 2015-09-11 19:04 ./usr/include/volume_io/multidim.h
-rw-r--r-- root/root 1945 2015-09-11 19:04 ./usr/include/volume_io/progress.h
-rw-r--r-- root/root 1761 2015-09-11 19:04 ./usr/include/volume_io/string_funcs.h
-rw-r--r-- root/root 1614 2015-09-11 19:04 ./usr/include/volume_io/system_dependent.h
-rw-r--r-- root/root 3299 2015-09-11 19:04 ./usr/include/volume_io/transforms.h
-rw-r--r-- root/root 56559 2015-09-11 19:04 ./usr/include/volume_io/vol_io_prototypes.h
-rw-r--r-- root/root 18817 2015-09-11 19:04 ./usr/include/volume_io/volume.h
-rw-r--r-- root/root 3870 2015-09-11 19:04 ./usr/include/volume_io/volume_cache.h
-rw-r--r-- root/root 15000 2015-09-11 19:04 ./usr/include/voxel_loop.h
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/cmake/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/cmake/LIBMINC/
-rw-r--r-- root/root 2062 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/cmake/LIBMINC/LIBMINCConfig.cmake
-rw-r--r-- root/root 343 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/cmake/LIBMINC/UseLIBMINC.cmake
lrwxrwxrwx root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/libminc2.so -> libminc2.so.4.0.0
lrwxrwxrwx root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/libminc_io.so -> libminc_io.so.4.0.0
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/doc/libminc-dev/
-rw-r--r-- root/root 4594 2018-02-08 13:50 ./usr/share/doc/libminc-dev/changelog.Debian.gz
-rw-r--r-- root/root 12958 2015-09-11 19:04 ./usr/share/doc/libminc-dev/changelog.gz
-rw-r--r-- root/root 990 2018-02-08 13:50 ./usr/share/doc/libminc-dev/copyright
libminc2-4.0.0-dbgsym_2.3.00-5_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 645896 bytes: control archive=616 bytes.
451 bytes, 13 lines control
212 bytes, 2 lines md5sums
Package: libminc2-4.0.0-dbgsym
Source: libminc
Version: 2.3.00-5
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 743
Depends: libminc2-4.0.0 (= 2.3.00-5)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libminc2-4.0.0
Build-Ids: 40ce08bd75b3cd574d037d4c7bee760d9710653a 69b984e0f0f2efcc820ab2e7bdd7780351e8656f
drwxr-xr-x root/root 0 2018-02-08 13:50 ./
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/debug/.build-id/40/
-rw-r--r-- root/root 155476 2018-02-08 13:50 ./usr/lib/debug/.build-id/40/ce08bd75b3cd574d037d4c7bee760d9710653a.debug
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/debug/.build-id/69/
-rw-r--r-- root/root 593836 2018-02-08 13:50 ./usr/lib/debug/.build-id/69/b984e0f0f2efcc820ab2e7bdd7780351e8656f.debug
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-02-08 13:50 ./usr/share/doc/libminc2-4.0.0-dbgsym -> libminc2-4.0.0
libminc2-4.0.0_2.3.00-5_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 197348 bytes: control archive=1220 bytes.
1223 bytes, 25 lines control
394 bytes, 5 lines md5sums
62 bytes, 2 lines shlibs
67 bytes, 2 lines triggers
Package: libminc2-4.0.0
Source: libminc
Version: 2.3.00-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 494
Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.5), libhdf5-100, libnetcdf13 (>= 3.6.1), libnifti2, libstdc++6 (>= 5.2), libsz2, zlib1g (>= 1:1.1.4)
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://github.com/BIC-MNI/libminc
Description: MNI medical image format library
This package contains the libraries libminc2 and libminc_io.
.
The Minc file format is a highly flexible medical image file format.
Minc version 1 is built on top of the NetCDF generalized data format.
Minc version 2 is built on top of the HDF data format. This library
handles both formats. In each case the format is
simple, self-describing, extensible, portable and N-dimensional, with
programming interfaces for both low-level data access and high-level
volume manipulation. On top of the libraries is a suite of generic
image-file manipulation tools. The format, libraries and tools are
designed for use in a medical-imaging research environment : they are
simple and powerful and make no attempt to provide a pretty interface
to users.
drwxr-xr-x root/root 0 2018-02-08 13:50 ./
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 428400 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/libminc2.so.4.0.0
-rw-r--r-- root/root 46496 2018-02-08 13:50 ./usr/lib/arm-linux-gnueabihf/libminc_io.so.4.0.0
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-02-08 13:50 ./usr/share/doc/libminc2-4.0.0/
-rw-r--r-- root/root 4594 2018-02-08 13:50 ./usr/share/doc/libminc2-4.0.0/changelog.Debian.gz
-rw-r--r-- root/root 12958 2015-09-11 19:04 ./usr/share/doc/libminc2-4.0.0/changelog.gz
-rw-r--r-- root/root 990 2018-02-08 13:50 ./usr/share/doc/libminc2-4.0.0/copyright
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| Cleanup |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
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| Summary |
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Build Architecture: armhf
Build-Space: 112120
Build-Time: 854
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 414
Job: libminc_2.3.00-5
Machine Architecture: armhf
Package: libminc
Package-Time: 1347
Source-Version: 2.3.00-5
Space: 112120
Status: successful
Version: 2.3.00-5
--------------------------------------------------------------------------------
Finished at 2018-02-14T14:46:26Z
Build needed 00:22:27, 112120k disc space