libmaus2 →
2.0.810+ds-1 →
armhf → 2022-04-15 22:04:12
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| libmaus2 2.0.810+ds-1 (armhf) Fri, 15 Apr 2022 13:19:15 +0000 |
+==============================================================================+
Package: libmaus2
Version: 2.0.810+ds-1
Source Version: 2.0.810+ds-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-774f3eea-6e54-4c92-8727-636aec2194bf' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [12.9 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [13.9 MB]
Fetched 26.8 MB in 6min 42s (66.6 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libmaus2' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libmaus2.git
Please use:
git clone https://salsa.debian.org/med-team/libmaus2.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1665 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main libmaus2 2.0.810+ds-1 (dsc) [2196 B]
Get:2 http://172.17.4.1/private bookworm-staging/main libmaus2 2.0.810+ds-1 (tar) [1657 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main libmaus2 2.0.810+ds-1 (diff) [6124 B]
Fetched 1665 kB in 0s (6761 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libmaus2-R3tElz/libmaus2-2.0.810+ds' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libmaus2-R3tElz' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-2IViZb/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-2IViZb/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-2IViZb/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Packages [434 B]
Fetched 2110 B in 4s (570 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 45 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (23.1 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12544 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs, libboost-atomic-dev, libsecrecy-dev, pkg-config, zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, libboost-atomic-dev, libsecrecy-dev, pkg-config, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-libmaus2-dummy' in '/<<BUILDDIR>>/resolver-2IViZb/apt_archive/sbuild-build-depends-libmaus2-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libmaus2-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Sources [536 B]
Get:5 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ Packages [615 B]
Fetched 2484 B in 1s (3367 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libmaus2 build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gcc-11-base gcc-12-base
gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6
libassuan-dev libatomic1 libboost-atomic-dev libboost-atomic1.74-dev
libboost-atomic1.74.0 libboost1.74-dev libcc1-0 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libgcc-11-dev libgcc-s1 libglib2.0-0
libgmp-dev libgmpxx4ldbl libgomp1 libgpg-error-dev libgpgme-dev libgpgme11
libicu67 libmagic-mgc libmagic1 libpipeline1 libsecrecy-dev libsigsegv2
libstdc++-11-dev libstdc++6 libsub-override-perl libtool libubsan1
libuchardet0 libxml2 m4 man-db nettle-dev pkg-config po-debconf
sensible-utils zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libboost1.74-doc
libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev
libboost-contract1.74-dev libboost-coroutine1.74-dev
libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-program-options1.74-dev libboost-python1.74-dev
libboost-random1.74-dev libboost-regex1.74-dev
libboost-serialization1.74-dev libboost-stacktrace1.74-dev
libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
gmp-doc libgmp10-doc libmpfr-dev libstdc++-11-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gcc-12-base gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libassuan-dev
libboost-atomic-dev libboost-atomic1.74-dev libboost-atomic1.74.0
libboost1.74-dev libdebhelper-perl libelf1 libfile-stripnondeterminism-perl
libgcc-11-dev libglib2.0-0 libgmp-dev libgmpxx4ldbl libgpg-error-dev
libgpgme-dev libgpgme11 libicu67 libmagic-mgc libmagic1 libpipeline1
libsecrecy-dev libsigsegv2 libstdc++-11-dev libsub-override-perl libtool
libuchardet0 libxml2 m4 man-db nettle-dev pkg-config po-debconf
sbuild-build-depends-libmaus2-dummy sensible-utils zlib1g-dev
The following packages will be upgraded:
gcc-11-base libasan6 libatomic1 libcc1-0 libgcc-s1 libgomp1 libstdc++6
libubsan1 zlib1g
9 upgraded, 51 newly installed, 0 to remove and 36 not upgraded.
Need to get 38.9 MB of archives.
After this operation, 250 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-2IViZb/apt_archive ./ sbuild-build-depends-libmaus2-dummy 0.invalid.0 [900 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-4 [84.2 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12-20220319-1+rpi1 [207 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12-20220319-1+rpi1 [36.1 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12-20220319-1+rpi1 [506 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.3-1 [136 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.5-1 [32.9 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.10.2-1 [1362 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf sensible-utils all 0.0.17 [21.5 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-2 [295 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-2 [119 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-2 [65.8 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-6 [171 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.14-1 [36.6 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-6 [510 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf d-shlibs all 0.104 [18.6 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.6 [193 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-3 [526 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.186-1 [174 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12-20220319-1+rpi1 [95.3 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.13+dfsg-1 [593 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-6 [1214 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.6 [1054 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libasan6 armhf 11.2.0-19+rpi1 [1946 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12-20220319-1+rpi1 [861 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12-20220319-1+rpi1 [32.1 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12-20220319-1+rpi1 [8188 B]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf gcc-11-base armhf 11.2.0-19+rpi1 [208 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libgpg-error-dev armhf 1.43-3 [126 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libassuan-dev armhf 2.5.5-1 [106 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libgcc-11-dev armhf 11.2.0-19+rpi1 [697 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-11-dev armhf 11.2.0-19+rpi1 [1964 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libboost1.74-dev armhf 1.74.0-14+b1 [9533 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libboost-atomic1.74.0 armhf 1.74.0-14+b1 [245 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libboost-atomic1.74-dev armhf 1.74.0-14+b1 [246 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libboost-atomic-dev armhf 1.74.0.3+b4 [4912 B]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.72.0-1 [1229 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg-3 [337 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libgmp-dev armhf 2:6.2.1+dfsg-3 [582 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libgpgme11 armhf 1.16.0-1.2 [269 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libgpgme-dev armhf 1.16.0-1.2 [466 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf nettle-dev armhf 3.7.3-1 [1266 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libsecrecy-dev armhf 0.0.5+ds-2 [21.3 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4 [183 kB]
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Setting up libpipeline1:armhf (1.5.5-1) ...
Setting up gcc-11-base:armhf (11.2.0-19+rpi1) ...
Setting up libboost-atomic1.74.0:armhf (1.74.0-14+b1) ...
Setting up bsdextrautils (2.37.3-1) ...
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.41-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.72.0-1) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (13.6) ...
Setting up libmagic1:armhf (1:5.41-2) ...
Setting up gettext-base (0.21-6) ...
Setting up file (1:5.41-2) ...
Setting up libgomp1:armhf (12-20220319-1+rpi1) ...
Setting up libgpgme11:armhf (1.16.0-1.2) ...
Setting up libasan6:armhf (11.2.0-19+rpi1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libgmpxx4ldbl:armhf (2:6.2.1+dfsg-3) ...
Setting up libgpg-error-dev (1.43-3) ...
Setting up libsigsegv2:armhf (2.14-1) ...
Setting up libatomic1:armhf (12-20220319-1+rpi1) ...
Setting up autopoint (0.21-6) ...
Setting up pkg-config (0.29.2-1) ...
Setting up libassuan-dev (2.5.5-1) ...
Setting up d-shlibs (0.104) ...
Setting up libgpgme-dev (1.16.0-1.2) ...
Setting up libubsan1:armhf (12-20220319-1+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-4) ...
Setting up libgcc-11-dev:armhf (11.2.0-19+rpi1) ...
Setting up sensible-utils (0.0.17) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.186-1) ...
Setting up libxml2:armhf (2.9.13+dfsg-1) ...
Setting up libcc1-0:armhf (12-20220319-1+rpi1) ...
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up gettext (0.21-6) ...
Setting up libgmp-dev:armhf (2:6.2.1+dfsg-3) ...
Setting up nettle-dev:armhf (3.7.3-1) ...
Setting up libtool (2.4.7-3) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.71-2) ...
Setting up libstdc++-11-dev:armhf (11.2.0-19+rpi1) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-8) ...
Setting up libsecrecy-dev:armhf (0.0.5+ds-2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libboost1.74-dev:armhf (1.74.0-14+b1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.10.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up libboost-atomic1.74-dev:armhf (1.74.0-14+b1) ...
Setting up libboost-atomic-dev:armhf (1.74.0.3+b4) ...
Setting up debhelper (13.6) ...
Setting up sbuild-build-depends-libmaus2-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.33-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.38-3+rpi1 dpkg-dev_1.21.2+rpi1 g++-10_10.3.0-14+rpi1 gcc-10_10.3.0-14+rpi1 libc6-dev_2.33-7+rpi1 libstdc++-10-dev_10.3.0-14+rpi1 libstdc++-11-dev_11.2.0-19+rpi1 libstdc++6_12-20220319-1+rpi1 linux-libc-dev_5.16.14-1+rpi1
Package versions: adduser_3.120 apt_2.4.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2+rpi1 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-3+rpi1 binutils-arm-linux-gnueabihf_2.38-3+rpi1 binutils-common_2.38-3+rpi1 bsdextrautils_2.37.3-1 bsdutils_1:2.37.3-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:10.2.1-1+rpi1 cpp-10_10.3.0-14+rpi1 d-shlibs_0.104 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.6 debianutils_5.7-0.1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-3 dpkg_1.21.2+rpi1 dpkg-dev_1.21.2+rpi1 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.28-1 file_1:5.41-2 findutils_4.9.0-2 g++_4:10.2.1-1+rpi1 g++-10_10.3.0-14+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.3.0-14+rpi1 gcc-10-base_10.3.0-14+rpi1 gcc-11-base_11.2.0-19+rpi1 gcc-12-base_12-20220319-1+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-6 gettext-base_0.21-6 gnupg_2.2.27-3 gnupg-l10n_2.2.27-3 gnupg-utils_2.2.27-3+b1 gpg_2.2.27-3 gpg-agent_2.2.27-3 gpg-wks-client_2.2.27-3 gpg-wks-server_2.2.27-3 gpgconf_2.2.27-3 gpgsm_2.2.27-3 gpgv_2.2.27-3+b1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 init-system-helpers_1.62 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.4.3 libarchive-zip-perl_1.68-1 libasan6_11.2.0-19+rpi1 libassuan-dev_2.5.5-1 libassuan0_2.5.5-1 libatomic1_12-20220319-1+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbinutils_2.38-3+rpi1 libblkid1_2.37.3-1 libboost-atomic-dev_1.74.0.3+b4 libboost-atomic1.74-dev_1.74.0-14+b1 libboost-atomic1.74.0_1.74.0-14+b1 libboost1.74-dev_1.74.0-14+b1 libbz2-1.0_1.0.8-5 libc-bin_2.33-7+rpi1 libc-dev-bin_2.33-7+rpi1 libc6_2.33-7+rpi1 libc6-dev_2.33-7+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_12-20220319-1+rpi1 libcom-err2_1.46.5-2 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38-3+rpi1 libctf0_2.38-3+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdpkg-perl_1.21.2+rpi1 libelf1_0.186-1 libext2fs2_1.46.5-2 libfakeroot_1.28-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-10-dev_10.3.0-14+rpi1 libgcc-11-dev_11.2.0-19+rpi1 libgcc-s1_12-20220319-1+rpi1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libglib2.0-0_2.72.0-1 libgmp-dev_2:6.2.1+dfsg-3 libgmp10_2:6.2.1+dfsg-3 libgmpxx4ldbl_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4 libgomp1_12-20220319-1+rpi1 libgpg-error-dev_1.43-3 libgpg-error0_1.43-3 libgpgme-dev_1.16.0-1.2 libgpgme11_1.16.0-1.2 libgssapi-krb5-2_1.19.2-2+b1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libk5crypto3_1.19.2-2+b1 libkeyutils1_1.6.1-3+rpi1 libkrb5-3_1.19.2-2+b1 libkrb5support0_1.19.2-2+b1 libksba8_1.6.0-2 libldap-2.4-2_2.4.59+dfsg-1+b1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.3-1 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libncursesw6_6.3-2 libnettle8_3.7.3-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libreadline8_8.1.2-1 libsasl2-2_2.1.28+dfsg-2+b1 libsasl2-modules-db_2.1.28+dfsg-2+b1 libseccomp2_2.5.3-2+rpi1 libsecrecy-dev_0.0.5+ds-2 libselinux1_3.3-1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1 libsqlite3-0_3.38.1-1 libss2_1.46.5-2 libssl1.1_1.1.1n-1 libstdc++-10-dev_10.3.0-14+rpi1 libstdc++-11-dev_11.2.0-19+rpi1 libstdc++6_12-20220319-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_250.4-1+rpi1 libtasn1-6_4.18.0-4 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.7-3 libubsan1_12-20220319-1+rpi1 libuchardet0_0.0.7-1 libudev1_250.4-1+rpi1 libunistring2_1.0-1 libuuid1_2.37.3-1 libxml2_2.9.13+dfsg-1 libxxhash0_0.8.1-1 libzstd1_1.4.9+dfsg-1+rpi1 linux-libc-dev_5.16.14-1+rpi1 login_1:4.11.1+dfsg1-2 logsave_1.46.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.2-1 mawk_1.3.4.20200120-3 mount_2.37.3-1 ncurses-base_6.3-2 ncurses-bin_6.3-2 netbase_6.3 nettle-dev_3.7.3-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libmaus2-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 util-linux_2.37.3-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-4 zlib1g-dev_1:1.2.11.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.KJWFz9HP/trustedkeys.kbx': General error
gpgv: Signature made Thu Feb 24 20:12:23 2022 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./libmaus2_2.0.810+ds-1.dsc
dpkg-source: info: extracting libmaus2 in /<<BUILDDIR>>/libmaus2-2.0.810+ds
dpkg-source: info: unpacking libmaus2_2.0.810+ds.orig.tar.xz
dpkg-source: info: unpacking libmaus2_2.0.810+ds-1.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-774f3eea-6e54-4c92-8727-636aec2194bf
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libmaus2
dpkg-buildpackage: info: source version 2.0.810+ds-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:4: warning: The macro `AC_CANONICAL_SYSTEM' is obsolete.
configure.ac:4: You should run autoupdate.
./lib/autoconf/general.m4:2081: AC_CANONICAL_SYSTEM is expanded from...
configure.ac:4: the top level
configure.ac:6: warning: The macro `AC_PROG_LIBTOOL' is obsolete.
configure.ac:6: You should run autoupdate.
m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from...
configure.ac:6: the top level
configure.ac:9: warning: 'AM_CONFIG_HEADER': this macro is obsolete.
configure.ac:9: You should use the 'AC_CONFIG_HEADERS' macro instead.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:1021: AM_CONFIG_HEADER is expanded from...
configure.ac:9: the top level
configure.ac:77: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:77: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:77: the top level
configure.ac:153: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:153: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:153: the top level
configure.ac:211: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:211: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:211: the top level
configure.ac:247: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:247: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:247: the top level
configure.ac:276: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:276: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:276: the top level
configure.ac:331: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:331: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:331: the top level
configure.ac:386: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:386: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:386: the top level
configure.ac:565: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:565: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:565: the top level
configure.ac:577: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:577: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:577: the top level
configure.ac:589: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:589: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:589: the top level
configure.ac:601: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:601: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:601: the top level
configure.ac:613: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:613: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:613: the top level
configure.ac:627: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:627: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:627: the top level
configure.ac:641: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:641: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:641: the top level
configure.ac:655: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:655: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:655: the top level
configure.ac:669: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:669: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:669: the top level
configure.ac:683: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:683: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:683: the top level
configure.ac:696: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:696: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:696: the top level
configure.ac:713: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:713: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:713: the top level
configure.ac:727: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:727: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:727: the top level
configure.ac:743: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:743: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:743: the top level
configure.ac:759: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:759: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:759: the top level
configure.ac:773: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:773: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:773: the top level
configure.ac:786: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:786: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:786: the top level
configure.ac:800: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:800: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:800: the top level
configure.ac:813: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:813: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:813: the top level
configure.ac:829: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:829: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:829: the top level
configure.ac:838: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:838: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:838: the top level
configure.ac:851: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:851: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:851: the top level
configure.ac:865: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:865: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:865: the top level
configure.ac:879: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:879: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:879: the top level
configure.ac:893: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:893: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:893: the top level
configure.ac:909: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:909: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:909: the top level
configure.ac:951: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:951: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:951: the top level
configure.ac:969: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:969: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:969: the top level
configure.ac:988: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:988: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:988: the top level
configure.ac:1003: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1003: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1003: the top level
configure.ac:1020: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1020: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1020: the top level
configure.ac:1038: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1038: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1038: the top level
configure.ac:1056: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1056: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1056: the top level
configure.ac:1073: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1073: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1073: the top level
configure.ac:1090: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1090: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1090: the top level
configure.ac:1107: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1107: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1107: the top level
configure.ac:1124: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1124: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1124: the top level
configure.ac:1157: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1157: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1157: the top level
configure.ac:1174: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1174: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1174: the top level
configure.ac:1191: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1191: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1191: the top level
configure.ac:1224: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1224: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1224: the top level
configure.ac:1242: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1242: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1242: the top level
configure.ac:1260: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1260: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1260: the top level
configure.ac:1280: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1280: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1280: the top level
configure.ac:1300: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1300: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1300: the top level
configure.ac:1320: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1320: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1320: the top level
configure.ac:1340: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1340: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1340: the top level
configure.ac:1360: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1360: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1360: the top level
configure.ac:1380: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1380: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1380: the top level
configure.ac:1400: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1400: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1400: the top level
configure.ac:1437: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1437: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1437: the top level
configure.ac:1457: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1457: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1457: the top level
configure.ac:1477: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1477: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1477: the top level
configure.ac:1497: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1497: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1497: the top level
configure.ac:1536: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1536: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1536: the top level
configure.ac:1556: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1556: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1556: the top level
configure.ac:1577: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1577: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1577: the top level
configure.ac:1597: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1597: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1597: the top level
configure.ac:1612: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1612: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1612: the top level
configure.ac:1690: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1690: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1690: the top level
configure.ac:1699: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1699: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1699: the top level
configure.ac:1715: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1715: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1715: the top level
configure.ac:1731: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1731: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1731: the top level
configure.ac:1744: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1744: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1744: the top level
configure.ac:1759: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1759: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1759: the top level
configure.ac:1773: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1773: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1773: the top level
configure.ac:1787: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1787: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1787: the top level
configure.ac:1800: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1800: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1800: the top level
configure.ac:1819: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1819: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1819: the top level
configure.ac:1900: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:1900: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/ax_openmp.m4:68: AX_OPENMP is expanded from...
configure.ac:1900: the top level
configure.ac:1910: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1910: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1910: the top level
configure.ac:1926: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1926: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1926: the top level
configure.ac:1946: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:1946: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:1946: the top level
configure.ac:2343: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:2343: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:2343: the top level
configure.ac:2382: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:2382: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
configure.ac:2382: the top level
configure.ac:2739: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:2739: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:2739: the top level
configure.ac:2807: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:2807: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:2807: the top level
configure.ac:2836: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:2836: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:2836: the top level
configure.ac:2852: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:2852: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:2852: the top level
configure.ac:3018: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:3018: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:3018: the top level
configure.ac:3243: warning: AC_OUTPUT should be used without arguments.
configure.ac:3243: You should run autoupdate.
configure.ac:6: installing './compile'
configure.ac:4: installing './config.guess'
configure.ac:4: installing './config.sub'
configure.ac:8: installing './install-sh'
configure.ac:8: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
configure: Configuring for source in directory .
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking for gawk... no
checking for mawk... mawk
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /bin/mkdir -p
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking how to create a pax tar archive... gnutar
checking dependency style of gcc... none
checking whether we are cross compiling... no
checking for bash... /bin/bash
checking for base64... /usr/bin/base64
checking for gcc... (cached) gcc
checking whether the compiler supports GNU C... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to enable C11 features... (cached) none needed
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checking for g++... g++
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checking for g++ option to enable C++11 features... none needed
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
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checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking dependency style of g++... none
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configure: Using atomic_shared_ptr from boost
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checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating libmaus2.pc
config.status: creating ubuntu.sh
config.status: creating src/libmaus2/LibMausConfig.hpp
config.status: creating test/Makefile
config.status: creating config.h
config.status: executing libtool commands
config.status: executing depfiles commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds/src'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-Phred.lo `test -f 'libmaus2/fastx/Phred.cpp' || echo './'`libmaus2/fastx/Phred.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderBase.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderBase.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderBase.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-StrCmpNum.lo `test -f 'libmaus2/bambam/StrCmpNum.cpp' || echo './'`libmaus2/bambam/StrCmpNum.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGenerator.lo `test -f 'libmaus2/util/TempFileNameGenerator.cpp' || echo './'`libmaus2/util/TempFileNameGenerator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-Phred.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-StrCmpNum.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGenerator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -o libmaus2/fastx/la-Phred.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGeneratorState.lo `test -f 'libmaus2/util/TempFileNameGeneratorState.cpp' || echo './'`libmaus2/util/TempFileNameGeneratorState.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -o libmaus2/bambam/la-StrCmpNum.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGeneratorState.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ArgInfo.lo `test -f 'libmaus2/util/ArgInfo.cpp' || echo './'`libmaus2/util/ArgInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -o libmaus2/bambam/la-BamAlignmentDecoderBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -o libmaus2/util/la-ArgInfo.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -o libmaus2/util/la-TempFileNameGeneratorState.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -o libmaus2/util/la-TempFileNameGenerator.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-BitList.lo `test -f 'libmaus2/util/BitList.cpp' || echo './'`libmaus2/util/BitList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/BitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-BitList.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/BitList.cpp -o libmaus2/util/la-BitList.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-VarBitList.lo `test -f 'libmaus2/util/VarBitList.cpp' || echo './'`libmaus2/util/VarBitList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-VarBitList.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -o libmaus2/util/la-VarBitList.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Concat.lo `test -f 'libmaus2/util/Concat.cpp' || echo './'`libmaus2/util/Concat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Concat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Concat.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ConcatRequest.lo `test -f 'libmaus2/util/ConcatRequest.cpp' || echo './'`libmaus2/util/ConcatRequest.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConcatRequest.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Concat.cpp -o libmaus2/util/la-Concat.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -o libmaus2/util/la-ConcatRequest.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ConsoleColor.lo `test -f 'libmaus2/util/ConsoleColor.cpp' || echo './'`libmaus2/util/ConsoleColor.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConsoleColor.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-DynamicLoading.lo `test -f 'libmaus2/util/DynamicLoading.cpp' || echo './'`libmaus2/util/DynamicLoading.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-DynamicLoading.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -o libmaus2/util/la-ConsoleColor.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-GetFileSize.lo `test -f 'libmaus2/util/GetFileSize.cpp' || echo './'`libmaus2/util/GetFileSize.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Histogram.lo `test -f 'libmaus2/util/Histogram.cpp' || echo './'`libmaus2/util/Histogram.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GetFileSize.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Histogram.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Histogram.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-HistogramSet.lo `test -f 'libmaus2/util/HistogramSet.cpp' || echo './'`libmaus2/util/HistogramSet.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HistogramSet.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -o libmaus2/util/la-DynamicLoading.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1844 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<long long unsigned int> libmaus2::util::Histogram::getKeyVector()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -o libmaus2/util/la-HistogramSet.o >/dev/null 2>&1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1667 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1667:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1950 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1964:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1964 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1942:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1942 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::util::Histogram::getFreqSymVector()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1979:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1979 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1980 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1981 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1896:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1896 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Histogram.cpp -o libmaus2/util/la-Histogram.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-IncreasingList.lo `test -f 'libmaus2/util/IncreasingList.cpp' || echo './'`libmaus2/util/IncreasingList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IncreasingList.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-IntervalTree.lo `test -f 'libmaus2/util/IntervalTree.cpp' || echo './'`libmaus2/util/IntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IntervalTree.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1844 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1844:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1950 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1950:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1964:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1964 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-GenericIntervalTree.lo `test -f 'libmaus2/util/GenericIntervalTree.cpp' || echo './'`libmaus2/util/GenericIntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GenericIntervalTree.o
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static void libmaus2::util::IncreasingList::test(const std::vector<long long unsigned int>&)’:
/usr/include/c++/10/bits/stl_algo.h:1979:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1979 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1980 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1981 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1896:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1896 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -o libmaus2/util/la-IncreasingList.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -o libmaus2/util/la-IntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -o libmaus2/util/la-GenericIntervalTree.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-LookupIntervalTree.lo `test -f 'libmaus2/util/LookupIntervalTree.cpp' || echo './'`libmaus2/util/LookupIntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LookupIntervalTree.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-md5_interface.lo `test -f 'libmaus2/digest/md5_interface.cpp' || echo './'`libmaus2/digest/md5_interface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5_interface.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -o libmaus2/util/la-LookupIntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -o libmaus2/digest/la-md5_interface.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-MemUsage.lo `test -f 'libmaus2/util/MemUsage.cpp' || echo './'`libmaus2/util/MemUsage.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemUsage.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -o libmaus2/util/la-GetFileSize.o >/dev/null 2>&1
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/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-SaturatingCounter.lo `test -f 'libmaus2/util/SaturatingCounter.cpp' || echo './'`libmaus2/util/SaturatingCounter.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/nstat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-nstat.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SaturatingCounter.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -o libmaus2/util/la-MemUsage.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/nstat.cpp -o libmaus2/util/la-nstat.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-StringSerialisation.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-SuccinctBorderArray.lo `test -f 'libmaus2/util/SuccinctBorderArray.cpp' || echo './'`libmaus2/util/SuccinctBorderArray.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SuccinctBorderArray.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -o libmaus2/util/la-SaturatingCounter.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -o libmaus2/util/la-SuccinctBorderArray.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -o libmaus2/util/la-StringSerialisation.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Terminal.lo `test -f 'libmaus2/util/Terminal.cpp' || echo './'`libmaus2/util/Terminal.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Terminal.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Terminal.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-OctetString.lo `test -f 'libmaus2/util/OctetString.cpp' || echo './'`libmaus2/util/OctetString.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OctetString.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OctetString.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Terminal.cpp -o libmaus2/util/la-Terminal.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8String.lo `test -f 'libmaus2/util/Utf8String.cpp' || echo './'`libmaus2/util/Utf8String.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8String.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndexDecoder.lo `test -f 'libmaus2/util/Utf8BlockIndexDecoder.cpp' || echo './'`libmaus2/util/Utf8BlockIndexDecoder.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -o libmaus2/util/la-Utf8BlockIndexDecoder.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndex.lo `test -f 'libmaus2/util/Utf8BlockIndex.cpp' || echo './'`libmaus2/util/Utf8BlockIndex.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndex.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderBuffer.lo `test -f 'libmaus2/util/Utf8DecoderBuffer.cpp' || echo './'`libmaus2/util/Utf8DecoderBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderBuffer.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -o libmaus2/util/la-Utf8DecoderBuffer.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::util::Utf8BlockIndex::unique_ptr_type libmaus2::util::Utf8BlockIndex::constructFromUtf8File(const string&, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OctetString.cpp -o libmaus2/util/la-OctetString.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -o libmaus2/util/la-Utf8BlockIndex.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderWrapper.lo `test -f 'libmaus2/util/Utf8DecoderWrapper.cpp' || echo './'`libmaus2/util/Utf8DecoderWrapper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderWrapper.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-AlignmentValidity.lo `test -f 'libmaus2/bambam/AlignmentValidity.cpp' || echo './'`libmaus2/bambam/AlignmentValidity.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-AlignmentValidity.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -o libmaus2/bambam/la-AlignmentValidity.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -o libmaus2/util/la-Utf8DecoderWrapper.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamFlagBase.lo `test -f 'libmaus2/bambam/BamFlagBase.cpp' || echo './'`libmaus2/bambam/BamFlagBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamFlagBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -o libmaus2/util/la-Utf8String.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -o libmaus2/bambam/la-BamFlagBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-ReadGroup.lo `test -f 'libmaus2/bambam/ReadGroup.cpp' || echo './'`libmaus2/bambam/ReadGroup.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadGroup.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-DuplicationMetrics.lo `test -f 'libmaus2/bambam/DuplicationMetrics.cpp' || echo './'`libmaus2/bambam/DuplicationMetrics.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-DuplicationMetrics.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -o libmaus2/bambam/la-ReadGroup.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -o libmaus2/bambam/la-DuplicationMetrics.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamDefaultAdapters.lo `test -f 'libmaus2/bambam/BamDefaultAdapters.cpp' || echo './'`libmaus2/bambam/BamDefaultAdapters.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamDefaultAdapters.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamRange.lo `test -f 'libmaus2/bambam/BamRange.cpp' || echo './'`libmaus2/bambam/BamRange.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -o libmaus2/bambam/la-BamDefaultAdapters.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexBinChunk.lo `test -f 'libmaus2/bambam/BamIndexBinChunk.cpp' || echo './'`libmaus2/bambam/BamIndexBinChunk.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexBinChunk.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexLinearChunk.lo `test -f 'libmaus2/bambam/BamIndexLinearChunk.cpp' || echo './'`libmaus2/bambam/BamIndexLinearChunk.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -o libmaus2/bambam/la-BamIndexBinChunk.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -o libmaus2/bambam/la-BamIndexLinearChunk.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/huffman/la-HuffmanTree.lo `test -f 'libmaus2/huffman/HuffmanTree.cpp' || echo './'`libmaus2/huffman/HuffmanTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-HuffmanTree.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderInfo.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderInfo.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -o libmaus2/huffman/la-HuffmanTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -o libmaus2/bambam/la-BamAlignmentDecoderInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Base.lo `test -f 'libmaus2/lz/Lz4Base.cpp' || echo './'`libmaus2/lz/Lz4Base.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Base.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Compress.lo `test -f 'libmaus2/lz/Lz4Compress.cpp' || echo './'`libmaus2/lz/Lz4Compress.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Compress.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -o libmaus2/lz/la-Lz4Base.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4DecoderBuffer.lo `test -f 'libmaus2/lz/Lz4DecoderBuffer.cpp' || echo './'`libmaus2/lz/Lz4DecoderBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -o libmaus2/bambam/la-BamRange.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -o libmaus2/lz/la-Lz4DecoderBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -o libmaus2/lz/la-Lz4Compress.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/lz/la-lz4.lo `test -f 'libmaus2/lz/lz4.c' || echo './'`libmaus2/lz/lz4.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -fPIC -DPIC -o libmaus2/lz/.libs/la-lz4.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexInterval.lo `test -f 'libmaus2/fm/BidirectionalIndexInterval.cpp' || echo './'`libmaus2/fm/BidirectionalIndexInterval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -o libmaus2/fm/la-BidirectionalIndexInterval.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.lo `test -f 'libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp' || echo './'`libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastALineParserLineInfo.lo `test -f 'libmaus2/fastx/FastALineParserLineInfo.cpp' || echo './'`libmaus2/fastx/FastALineParserLineInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o >/dev/null 2>&1
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -o libmaus2/lz/la-lz4.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -o libmaus2/fastx/la-FastALineParserLineInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAMatchTable.lo `test -f 'libmaus2/fastx/FastAMatchTable.cpp' || echo './'`libmaus2/fastx/FastAMatchTable.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAMatchTable.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndexEntry.lo `test -f 'libmaus2/fastx/FastABgzfIndexEntry.cpp' || echo './'`libmaus2/fastx/FastABgzfIndexEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -o libmaus2/fastx/la-FastAMatchTable.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndex.lo `test -f 'libmaus2/fastx/FastABgzfIndex.cpp' || echo './'`libmaus2/fastx/FastABgzfIndex.cpp
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndex.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndexEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -o libmaus2/fastx/la-FastABgzfIndexEntry.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -o libmaus2/fastx/la-FastAIndexEntry.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndex.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalBaseConstants.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -o libmaus2/fastx/la-FastABgzfIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -o libmaus2/lcs/la-LocalBaseConstants.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalEditDistanceResult.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -o libmaus2/lcs/la-LocalEditDistanceResult.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFile.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFileEntry.lo `test -f 'libmaus2/bambam/GeneFlatFileEntry.cpp' || echo './'`libmaus2/bambam/GeneFlatFileEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -o libmaus2/fastx/la-FastAIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -o libmaus2/bambam/la-GeneFlatFileEntry.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -o libmaus2/bambam/la-GeneFlatFile.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-SamInfoBase.lo `test -f 'libmaus2/bambam/SamInfoBase.cpp' || echo './'`libmaus2/bambam/SamInfoBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-SamInfoBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -o libmaus2/bambam/la-BamHeaderParserStateBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -o libmaus2/bambam/la-SamInfoBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA1.lo `test -f 'libmaus2/digest/SHA1.cpp' || echo './'`libmaus2/digest/SHA1.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA1.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_224.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -o libmaus2/digest/la-SHA1.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -o libmaus2/digest/la-SHA2_224.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_256.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_384.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_512.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -o libmaus2/digest/la-SHA2_256.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -o libmaus2/digest/la-SHA2_384.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -o libmaus2/digest/la-SHA2_512.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32.lo `test -f 'libmaus2/digest/CRC32.cpp' || echo './'`libmaus2/digest/CRC32.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C_Core.lo `test -f 'libmaus2/digest/CRC32C_Core.cpp' || echo './'`libmaus2/digest/CRC32C_Core.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -o libmaus2/digest/la-CRC32C_Core.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C.lo `test -f 'libmaus2/digest/CRC32C.cpp' || echo './'`libmaus2/digest/CRC32C.cpp
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -o libmaus2/digest/la-CRC32_Core.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-NameInfoBase.lo `test -f 'libmaus2/fastx/NameInfoBase.cpp' || echo './'`libmaus2/fastx/NameInfoBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-NameInfoBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -o libmaus2/digest/la-CRC32.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -o libmaus2/fastx/la-NameInfoBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-RefIdInterval.lo `test -f 'libmaus2/bambam/parallel/RefIdInterval.cpp' || echo './'`libmaus2/bambam/parallel/RefIdInterval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -o libmaus2/digest/la-CRC32C.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -o libmaus2/bambam/parallel/la-RefIdInterval.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-RefPathToken.lo `test -f 'libmaus2/fastx/RefPathToken.cpp' || echo './'`libmaus2/fastx/RefPathToken.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathToken.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathTokenVector.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -o libmaus2/fastx/la-RefPathToken.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -o libmaus2/fastx/la-RefPathTokenVector.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignmentStatistics.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignerFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -o libmaus2/fastx/la-SingleWordDNABitBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -o libmaus2/lcs/la-AlignmentStatistics.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-BandedAlignerFactory.lo `test -f 'libmaus2/lcs/BandedAlignerFactory.cpp' || echo './'`libmaus2/lcs/BandedAlignerFactory.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TraceBlock.lo `test -f 'libmaus2/dazzler/align/TraceBlock.cpp' || echo './'`libmaus2/dazzler/align/TraceBlock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-BandedAlignerFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TraceBlock.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-ApproximateRun.lo `test -f 'libmaus2/dazzler/align/ApproximateRun.cpp' || echo './'`libmaus2/dazzler/align/ApproximateRun.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-ApproximateRun.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -o libmaus2/dazzler/align/la-ApproximateRun.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -o libmaus2/dazzler/align/la-TraceBlock.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo `test -f 'libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp' || echo './'`libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapMeta.lo `test -f 'libmaus2/dazzler/align/OverlapMeta.cpp' || echo './'`libmaus2/dazzler/align/OverlapMeta.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapMeta.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -o libmaus2/lcs/la-BandedAlignerFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -o libmaus2/lcs/la-AlignerFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -o libmaus2/dazzler/align/la-OverlapMeta.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Tandem.lo `test -f 'libmaus2/dazzler/align/Tandem.cpp' || echo './'`libmaus2/dazzler/align/Tandem.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Tandem.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TandemVector.lo `test -f 'libmaus2/dazzler/align/TandemVector.cpp' || echo './'`libmaus2/dazzler/align/TandemVector.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TandemVector.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/math/la-GmpInteger.lo `test -f 'libmaus2/math/GmpInteger.cpp' || echo './'`libmaus2/math/GmpInteger.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -o libmaus2/dazzler/align/la-Tandem.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -o libmaus2/dazzler/align/la-TandemVector.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpInteger.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/math/la-GmpFloat.lo `test -f 'libmaus2/math/GmpFloat.cpp' || echo './'`libmaus2/math/GmpFloat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -o libmaus2/math/la-GmpInteger.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpFloat.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TracePoint.lo `test -f 'libmaus2/dazzler/align/TracePoint.cpp' || echo './'`libmaus2/dazzler/align/TracePoint.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TracePoint.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -o libmaus2/dazzler/align/la-TracePoint.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-XzDecoder.lo `test -f 'libmaus2/lz/XzDecoder.cpp' || echo './'`libmaus2/lz/XzDecoder.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -o libmaus2/math/la-GmpFloat.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-XzDecoder.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ArgParser.lo `test -f 'libmaus2/util/ArgParser.cpp' || echo './'`libmaus2/util/ArgParser.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgParser.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -o libmaus2/lz/la-XzDecoder.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataSequence.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataSequence.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataSequence.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -o libmaus2/util/la-ArgParser.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -o libmaus2/fastx/la-DNAIndexMetaDataSequence.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaData.lo `test -f 'libmaus2/fastx/DNAIndexMetaData.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaData.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaData.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-PileVectorElement.lo `test -f 'libmaus2/bambam/PileVectorElement.cpp' || echo './'`libmaus2/bambam/PileVectorElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileVectorElement.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-PileQualityVectorElement.lo `test -f 'libmaus2/bambam/PileQualityVectorElement.cpp' || echo './'`libmaus2/bambam/PileQualityVectorElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileQualityVectorElement.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA3_256.lo `test -f 'libmaus2/digest/SHA3_256.cpp' || echo './'`libmaus2/digest/SHA3_256.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -o libmaus2/bambam/la-PileVectorElement.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA3_256.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -o libmaus2/fastx/la-DNAIndexMetaData.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -o libmaus2/bambam/la-PileQualityVectorElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBand.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBand.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-DNARankBiDirRange.lo `test -f 'libmaus2/rank/DNARankBiDirRange.cpp' || echo './'`libmaus2/rank/DNARankBiDirRange.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -o libmaus2/digest/la-SHA3_256.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankBiDirRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -o libmaus2/rank/la-DNARankBiDirRange.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceElement.lo `test -f 'libmaus2/lcs/NNPTraceElement.cpp' || echo './'`libmaus2/lcs/NNPTraceElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -o libmaus2/lcs/la-NNPTraceElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceContainer.lo `test -f 'libmaus2/lcs/NNPTraceContainer.cpp' || echo './'`libmaus2/lcs/NNPTraceContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceContainer.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPAlignResult.lo `test -f 'libmaus2/lcs/NNPAlignResult.cpp' || echo './'`libmaus2/lcs/NNPAlignResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPAlignResult.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAToCompact4BigBand.lo `test -f 'libmaus2/fastx/FastAToCompact4BigBand.cpp' || echo './'`libmaus2/fastx/FastAToCompact4BigBand.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -o libmaus2/lcs/la-NNPAlignResult.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -o libmaus2/lcs/la-NNPTraceContainer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-ZlibInterface.lo `test -f 'libmaus2/lz/ZlibInterface.cpp' || echo './'`libmaus2/lz/ZlibInterface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-ZlibInterface.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -o libmaus2/lz/la-ZlibInterface.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-FileRemoval.lo `test -f 'libmaus2/aio/FileRemoval.cpp' || echo './'`libmaus2/aio/FileRemoval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-FileRemoval.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/fastx/FastAToCompact4BigBand.hpp:21,
from libmaus2/fastx/FastAToCompact4BigBand.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static int libmaus2::fastx::FastAToCompact4BigBand::fastaToCompact4BigBand(const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, std::ostream*, std::string)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
403 | }
| ^
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >; _Distance = int; _Tp = QueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<QueueElement> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {QueueElement}; _Tp = QueueElement; _Alloc = std::allocator<QueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<QueueElement, std::allocator<QueueElement> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::huffman::RLEncoderTemplate<_huffmanencoderfile_type>::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool) [with _huffmanencoderfile_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, IsaTriple>}; _Tp = std::pair<long long unsigned int, IsaTriple>; _Alloc = std::allocator<std::pair<long long unsigned int, IsaTriple> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, long long unsigned int>}; _Tp = std::pair<long long int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolDepthVector(std::vector<std::pair<long long int, long long unsigned int> >&, uint64_t) const’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long int, long long unsigned int>*, std::vector<std::pair<long long int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -o libmaus2/aio/la-FileRemoval.o >/dev/null 2>&1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTreeFromRl(const string&, const string&, const string&, const libmaus2::huffman::HuffmanTree&, uint64_t, uint64_t) [with rl_decoder = libmaus2::huffman::RLDecoder; bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::PairFileSorting::sortPairFileTemplate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool, bool, bool, out_type&, uint64_t, uint64_t, bool, uint64_t, std::ostream*) [with out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::util::MemTempFileContainer::closeOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::suffixsort::bwtb3m::BwtSelectSSA::computeSSA(std::vector<std::__cxx11::basic_string<char> >, const string&, const string&, const string&, const std::vector<std::__cxx11::basic_string<char> >&, std::string, bool, uint64_t, uint64_t, uint64_t, uint64_t, std::ostream*)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus210suffixsort6bwtb3m12BwtSelectSSA10computeSSAESt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS9_EERKS9_SD_SD_RKSB_S9_byyyyPSo._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::util::ImpCompactNumberArray::unique_ptr_type libmaus2::util::ImpCompactNumberArrayGenerator::createFinal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-DNARankMEM.lo `test -f 'libmaus2/rank/DNARankMEM.cpp' || echo './'`libmaus2/rank/DNARankMEM.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankMEM.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -o libmaus2/rank/la-DNARankMEM.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainAddQueueElement.lo `test -f 'libmaus2/lcs/ChainAddQueueElement.cpp' || echo './'`libmaus2/lcs/ChainAddQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainAddQueueElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -o libmaus2/lcs/la-ChainAddQueueElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-Chain.lo `test -f 'libmaus2/lcs/Chain.cpp' || echo './'`libmaus2/lcs/Chain.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-Chain.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -o libmaus2/lcs/la-Chain.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNode.lo `test -f 'libmaus2/lcs/ChainNode.cpp' || echo './'`libmaus2/lcs/ChainNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -o libmaus2/lcs/la-ChainNode.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNodeInfo.lo `test -f 'libmaus2/lcs/ChainNodeInfo.cpp' || echo './'`libmaus2/lcs/ChainNodeInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNodeInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -o libmaus2/lcs/la-ChainNodeInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainRemoveQueueElement.lo `test -f 'libmaus2/lcs/ChainRemoveQueueElement.cpp' || echo './'`libmaus2/lcs/ChainRemoveQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -o libmaus2/lcs/la-ChainRemoveQueueElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainSplayTreeNode.lo `test -f 'libmaus2/lcs/ChainSplayTreeNode.cpp' || echo './'`libmaus2/lcs/ChainSplayTreeNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -o libmaus2/lcs/la-ChainSplayTreeNode.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdOutputStreamFactory.lo `test -f 'libmaus2/aio/PosixFdOutputStreamFactory.cpp' || echo './'`libmaus2/aio/PosixFdOutputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -o libmaus2/aio/la-PosixFdOutputStreamFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapHeader.lo `test -f 'libmaus2/dazzler/align/OverlapHeader.cpp' || echo './'`libmaus2/dazzler/align/OverlapHeader.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapHeader.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -o libmaus2/dazzler/align/la-OverlapHeader.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignment.lo `test -f 'libmaus2/bambam/BamAlignment.cpp' || echo './'`libmaus2/bambam/BamAlignment.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignment.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -o libmaus2/fastx/la-FastAToCompact4BigBand.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -o libmaus2/bambam/la-BamAlignment.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequestQueryObject.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyBlock.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.hpp:21,
from libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequestQueryObject.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyBlock.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.hpp:21,
from libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyBaseBlock::collectBaseBlockIds(std::vector<long long unsigned int>&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequestQueryObject.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyBlock.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.hpp:21,
from libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::suffixsort::BwtMergeZBlock}; _Tp = libmaus2::suffixsort::BwtMergeZBlock; _Alloc = std::allocator<libmaus2::suffixsort::BwtMergeZBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillGapRequestObjects(uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixsort::BwtMergeZBlock*, std::vector<libmaus2::suffixsort::BwtMergeZBlock> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-InputOutputStreamInstance.lo `test -f 'libmaus2/aio/InputOutputStreamInstance.cpp' || echo './'`libmaus2/aio/InputOutputStreamInstance.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputOutputStreamInstance.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -o libmaus2/aio/la-InputOutputStreamInstance.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapInfo.lo `test -f 'libmaus2/dazzler/align/OverlapInfo.cpp' || echo './'`libmaus2/dazzler/align/OverlapInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -o libmaus2/dazzler/align/la-OverlapInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapDataInterface.lo `test -f 'libmaus2/dazzler/align/OverlapDataInterface.cpp' || echo './'`libmaus2/dazzler/align/OverlapDataInterface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -o libmaus2/dazzler/align/la-OverlapDataInterface.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/PathTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PathTools.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OFStreamOutputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/PathTools.cpp -o libmaus2/util/la-PathTools.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -o libmaus2/aio/la-OFStreamOutputStreamFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdInput.lo `test -f 'libmaus2/aio/PosixFdInput.cpp' || echo './'`libmaus2/aio/PosixFdInput.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdInput.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-BgzfDeflateHeaderFunctions.lo `test -f 'libmaus2/lz/BgzfDeflateHeaderFunctions.cpp' || echo './'`libmaus2/lz/BgzfDeflateHeaderFunctions.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateHeaderFunctions.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -o libmaus2/aio/la-PosixFdInput.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-BgzfDeflateZStreamBase.lo `test -f 'libmaus2/lz/BgzfDeflateZStreamBase.cpp' || echo './'`libmaus2/lz/BgzfDeflateZStreamBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateZStreamBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -o libmaus2/lz/la-BgzfDeflateHeaderFunctions.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-ChecksumsFactory.lo `test -f 'libmaus2/bambam/ChecksumsFactory.cpp' || echo './'`libmaus2/bambam/ChecksumsFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ChecksumsFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -o libmaus2/lz/la-BgzfDeflateZStreamBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-SecrecyInputStreamFactory.lo `test -f 'libmaus2/aio/SecrecyInputStreamFactory.cpp' || echo './'`libmaus2/aio/SecrecyInputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyInputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-SecrecyInputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyInputStreamFactory.cpp -o libmaus2/aio/la-SecrecyInputStreamFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-SecrecyOutputStreamFactory.lo `test -f 'libmaus2/aio/SecrecyOutputStreamFactory.cpp' || echo './'`libmaus2/aio/SecrecyOutputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-SecrecyOutputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyOutputStreamFactory.cpp -o libmaus2/aio/la-SecrecyOutputStreamFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -o libmaus2/bambam/la-ChecksumsFactory.o >/dev/null 2>&1
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libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -fPIC -DPIC -o libmaus2/bambam/.libs/la-Scram.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/ScramCramEncoding.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-ScramCramEncoding.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -o libmaus2/bambam/la-Scram.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeIsaBase.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeIsaBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/ScramCramEncoding.cpp -o libmaus2/bambam/parallel/la-ScramCramEncoding.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeIsaParallelBase.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeIsaParallelBase.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeIsaParallelBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeIsaParallelBase.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeIsaParallelBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeIsaBase.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeIsaBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeParallelGapFragMerge.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeParallelGapFragMerge.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortTemplateByte32.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateByte32.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateByte32.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateByte32.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortTemplateByte32.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeIsaParallelBase.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeIsaParallelBase.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::RLEncoderBaseTemplate<_bit_writer_type>::implicitFlush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortTemplateLz432.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortTemplateLz432.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeParallelGapFragMerge.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeParallelGapFragMerge.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateByte32.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
g++: internal compiler error: Bus error signal terminated program cc1plus
Please submit a full bug report,
with preprocessed source if appropriate.
See <file:///usr/share/doc/gcc-10/README.Bugs> for instructions.
make[3]: *** [Makefile:9820: libmaus2/suffixsort/bwtb3m/la-BwtMergeSortTemplateByte32.lo] Segmentation fault
make[3]: *** Waiting for unfinished jobs....
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
make[3]: *** [Makefile:9449: libmaus2/fastx/la-FastAToCompact4BigBand.lo] Error 1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Distance = int; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<libmaus2::gamma::SparseGammaGapMultiFile> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyBaseBlock::collectBaseBlockIds(std::vector<long long unsigned int>&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::suffixsort::BwtMergeZBlock}; _Tp = libmaus2::suffixsort::BwtMergeZBlock; _Alloc = std::allocator<libmaus2::suffixsort::BwtMergeZBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffman::createFinalStream(stream_type&) [with stream_type = libmaus2::aio::OutputStreamInstance]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘uint64_t libmaus2::gamma::GammaGapEncoder::encodeInternal(iterator, uint64_t, uint64_t) [with iterator = const std::atomic<unsigned int>*]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffmanParallel::createFinalStream(stream_type&, uint64_t) [with stream_type = std::basic_ostream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::huffman::RLEncoderTemplate<_huffmanencoderfile_type>::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool) [with _huffmanencoderfile_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::suffixsort::GapArrayByte::saveGammaGapArray(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>, std::_Select1st<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillNodeMap(std::map<long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>, std::_Select1st<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyBaseBlock::fillNodeMap(std::map<long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*>, std::_Select1st<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, libmaus2::suffixsort::bwtb3m::MergeStrategyBlock*> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeysInternal(const libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder&, const libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder&, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘bool libmaus2::sorting::MergingReadBack<_data_type, _order_type>::getNext(libmaus2::sorting::MergingReadBack<_data_type, _order_type>::data_type&) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillGapRequestObjects(uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixsort::BwtMergeZBlock*, std::vector<libmaus2::suffixsort::BwtMergeZBlock> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTreeFromRlWithTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, const string&, const libmaus2::huffman::HuffmanTree&, uint64_t, uint64_t, uint64_t, uint64_t) [with rl_decoder = libmaus2::huffman::RLDecoder; bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2512:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2512 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2195:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2195 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapMultiFile&}; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘int64_t libmaus2::util::KMP::BestPrefix<stream_type>::operator[](uint64_t) [with stream_type = std::basic_istream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<32>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:48,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommon(const string&, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<32>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:48,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
65 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:65:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTree(libmaus2::autoarray::AutoArray<unsigned char>&, const string&, const string&, const libmaus2::huffman::HuffmanTree*, uint64_t) [with bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:26,
from ./libmaus2/lf/ImpCompactHuffmanWaveletLF.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
./libmaus2/huffman/HuffmanTree.hpp: In constructor ‘libmaus2::huffman::HuffmanTree::HuffmanTree(iterator, uint64_t, bool, bool, bool) [with iterator = std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >]’:
./libmaus2/huffman/HuffmanTree.hpp:643:4: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
643 | HuffmanTree(iterator F, uint64_t const s, bool const sortbydepth = false, bool const rsetcode = false, bool const rdfsorder = false)
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor}; _Tp = libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor; _Alloc = std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
339 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>}; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘bool libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::getNext(libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::data_type&) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor}; _Tp = libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor; _Alloc = std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
339 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘bool libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::getNext(libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::data_type&) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘bool libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMergePacket(uint64_t&, uint64_t&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In constructor ‘libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::SerialisingMergingReadBack(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/stl_heap.h:412:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
412 | std::__make_heap(__first, __last, __cmp);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In constructor ‘libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::SerialisingMergingReadBack(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/stl_heap.h:412:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
412 | std::__make_heap(__first, __last, __cmp);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::RLEncoderBaseTemplate<_bit_writer_type>::implicitFlush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = char**; order_type = libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = char**; order_type = libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::aio::SerialisingBuffer<_data_type, _order_type>::flush() [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry>::~SerialisingSortingBufferedOutputFile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘std::unique_ptr<_Tp, _Dp>::~unique_ptr() [with _Tp = libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry>; _Dp = std::default_delete<libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::aio::SerialisingBuffer<_data_type, _order_type>::flush() [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::~SerialisingSortingBufferedOutputFile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘std::unique_ptr<_Tp, _Dp>::~unique_ptr() [with _Tp = libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>; _Dp = std::default_delete<libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2460:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2460 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::putFile(const std::vector<std::__cxx11::basic_string<char> >&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMergeSingle(bool) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_tree.h:1218:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1218 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1218:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1218 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::suffixsort::GapArrayByte::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeComputeSampledSA.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::PairFileSorting::sortPairFileTemplate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool, bool, bool, out_type&, uint64_t, uint64_t, bool, uint64_t, std::ostream*) [with out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor> libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t, uint64_t) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::merger_ptr_type libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::getMerger(uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::reduceUnique(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = std::less<libmaus2::util::DirectoryStructure::DirectoryEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, std::less<libmaus2::util::DirectoryStructure::DirectoryEntry> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor> libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t, uint64_t) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>*, std::vector<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry>, std::allocator<std::pair<long long unsigned int, libmaus2::util::DirectoryStructure::DirectoryEntry> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::merger_ptr_type libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::getMerger(uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::reduceUnique(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::util::DirectoryStructure::DirectoryEntry; _order_type = libmaus2::util::DirectoryStructure::DirectoryEntryRevComp]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::util::DirectoryStructure::DirectoryEntry, libmaus2::util::DirectoryStructure::DirectoryEntryRevComp>::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp:20:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<32>]’:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:552:7: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
552 | )
| ^
make[3]: *** [Makefile:9813: libmaus2/suffixsort/bwtb3m/la-BwtMergeParallelGapFragMerge.lo] Bus error
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.810+ds=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplateLz432.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortTemplateLz432.o >/dev/null 2>&1
make[3]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds/src'
make[2]: *** [Makefile:682: all-recursive] Error 1
make[2]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds'
make[1]: *** [Makefile:566: all] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.810+ds'
dh_auto_build: error: make -j4 returned exit code 2
make: *** [debian/rules:16: binary-arch] Error 25
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2022-04-15T22:01:47Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 23883
Distribution: bookworm-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 3119
Job: libmaus2_2.0.810+ds-1
Machine Architecture: armhf
Package: libmaus2
Package-Time: 31352
Source-Version: 2.0.810+ds-1
Space: 0
Status: failed
Version: 2.0.810+ds-1
--------------------------------------------------------------------------------
Finished at 2022-04-15T22:01:47Z
Build needed 00:00:00, 0k disc space